Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS10195

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
2,298,407	+		DDA3937_RS10190	0.22	-1.7
2,298,407	+		DDA3937_RS10190	0.22	-0.3
2,298,407	+		DDA3937_RS10190	0.22	+1.6
2,298,408	-		DDA3937_RS10190	0.22	+0.1
2,298,408	-		DDA3937_RS10190	0.22	+0.3
2,298,408	-		DDA3937_RS10190	0.22	+1.0
2,298,409	+		DDA3937_RS10190	0.22	-3.4
2,298,409	+		DDA3937_RS10190	0.22	-0.0
2,298,409	+		DDA3937_RS10190	0.22	-2.7
2,298,410	-		DDA3937_RS10190	0.22	-0.0
2,298,410	-		DDA3937_RS10190	0.22	+0.1
2,298,433	-		DDA3937_RS10190	0.25	-0.5
2,298,588	+		DDA3937_RS10190	0.38	-0.2
2,298,592	+				+2.5
2,298,592	+		DDA3937_RS10190	0.39	+0.5
2,298,592	+		DDA3937_RS10190	0.39	+0.5
2,298,593	-		DDA3937_RS10190	0.39	-0.1
2,298,593	-		DDA3937_RS10190	0.39	+0.0
2,298,593	-		DDA3937_RS10190	0.39	-1.0
2,298,593	-		DDA3937_RS10190	0.39	-0.8
2,298,593	-		DDA3937_RS10190	0.39	-0.8
2,298,714	-		DDA3937_RS10190	0.50	-0.3
2,298,879	+		DDA3937_RS10190	0.65	-0.5
2,298,879	+		DDA3937_RS10190	0.65	-2.6
2,298,880	-		DDA3937_RS10190	0.65	-0.8
2,298,880	-		DDA3937_RS10190	0.65	-0.2
2,298,929	-		DDA3937_RS10190	0.69	-0.4
2,299,003	-		DDA3937_RS10190	0.76	+0.2
2,299,005	+		DDA3937_RS10190	0.76	+1.1
2,299,006	-		DDA3937_RS10190	0.76	-0.5
2,299,006	-		DDA3937_RS10190	0.76	-1.4
2,299,006	-		DDA3937_RS10190	0.76	-1.0
2,299,048	-		DDA3937_RS10190	0.80	+0.6
2,299,069	-		DDA3937_RS10190	0.82	-0.8
2,299,069	-		DDA3937_RS10190	0.82	+1.1
2,299,069	-		DDA3937_RS10190	0.82	-1.6
2,299,219	+				-1.9
2,299,219	+				+0.5
2,299,330	-				+0.8
2,299,331	+				-1.0
2,299,331	+				-0.2
2,299,331	+				+1.1
2,299,331	+				-2.0
2,299,331	+				-0.8
2,299,332	-				-0.3
2,299,332	-				-1.6
2,299,344	-				-0.9
2,299,498	+				+2.1
2,299,498	+		DDA3937_RS10195	0.21	-0.5
2,299,498	+		DDA3937_RS10195	0.21	-0.5
2,299,499	-		DDA3937_RS10195	0.21	-1.3
2,299,499	-		DDA3937_RS10195	0.21	+1.5
2,299,499	-		DDA3937_RS10195	0.21	-0.2
2,299,565	+		DDA3937_RS10195	0.26	+0.2
2,299,566	-		DDA3937_RS10195	0.27	+2.0
2,299,613	+		DDA3937_RS10195	0.31	-0.3
2,299,614	-		DDA3937_RS10195	0.31	+3.3
2,299,614	-		DDA3937_RS10195	0.31	-1.0
2,299,683	+		DDA3937_RS10195	0.37	+0.1
2,299,684	-		DDA3937_RS10195	0.37	-3.2
2,299,774	+		DDA3937_RS10195	0.45	-0.2
2,299,774	+		DDA3937_RS10195	0.45	-0.2
2,299,774	+		DDA3937_RS10195	0.45	-1.2
2,299,774	+		DDA3937_RS10195	0.45	-0.1
2,299,774	+		DDA3937_RS10195	0.45	-0.3
2,299,774	+		DDA3937_RS10195	0.45	-0.2
2,299,774	+		DDA3937_RS10195	0.45	+0.2
2,299,774	+		DDA3937_RS10195	0.45	+0.8
2,299,775	-		DDA3937_RS10195	0.45	-0.5
2,299,775	-		DDA3937_RS10195	0.45	-2.0
2,299,775	-		DDA3937_RS10195	0.45	+0.2
2,299,775	-		DDA3937_RS10195	0.45	-1.4
2,299,780	+		DDA3937_RS10195	0.46	+0.9
2,299,780	+		DDA3937_RS10195	0.46	-0.2
2,299,780	+		DDA3937_RS10195	0.46	-0.6
2,299,780	+				-1.0
2,299,781	-		DDA3937_RS10195	0.46	-1.0
2,299,809	+		DDA3937_RS10195	0.48	+3.2
2,299,850	-		DDA3937_RS10195	0.52	-0.0
2,299,886	+		DDA3937_RS10195	0.55	+0.1
2,299,887	-		DDA3937_RS10195	0.55	-0.8
2,299,887	-		DDA3937_RS10195	0.55	-0.5
2,299,938	+		DDA3937_RS10195	0.60	+0.8
2,299,938	+		DDA3937_RS10195	0.60	-0.0
2,299,962	-		DDA3937_RS10195	0.62	-0.7
2,299,962	-		DDA3937_RS10195	0.62	+0.2
2,299,992	+		DDA3937_RS10195	0.64	-0.8
2,299,993	-				-0.8
2,299,993	-		DDA3937_RS10195	0.65	+0.5
2,299,993	-		DDA3937_RS10195	0.65	-0.5
2,299,993	-		DDA3937_RS10195	0.65	+2.0
2,299,993	-		DDA3937_RS10195	0.65	+0.2
2,300,091	+		DDA3937_RS10195	0.73	-1.0
2,300,091	+		DDA3937_RS10195	0.73	+3.0
2,300,092	-		DDA3937_RS10195	0.73	-1.1
2,300,092	-		DDA3937_RS10195	0.73	+1.3
2,300,093	+		DDA3937_RS10195	0.73	-1.1
2,300,093	+		DDA3937_RS10195	0.73	-0.9
2,300,093	+		DDA3937_RS10195	0.73	-1.2
2,300,093	+		DDA3937_RS10195	0.73	-0.3
2,300,093	+		DDA3937_RS10195	0.73	-0.3
2,300,093	+		DDA3937_RS10195	0.73	+0.3
2,300,094	-		DDA3937_RS10195	0.74	-0.2
2,300,094	-				+1.5
2,300,094	-		DDA3937_RS10195	0.74	-1.3
2,300,149	+		DDA3937_RS10195	0.78	-2.3
2,300,149	+		DDA3937_RS10195	0.78	-0.3
2,300,150	-		DDA3937_RS10195	0.78	+0.8
2,300,205	+		DDA3937_RS10195	0.83	+0.2
2,300,205	+		DDA3937_RS10195	0.83	+2.1
2,300,205	+		DDA3937_RS10195	0.83	-1.9
2,300,205	+		DDA3937_RS10195	0.83	-1.0
2,300,205	+		DDA3937_RS10195	0.83	+0.1
2,300,205	+		DDA3937_RS10195	0.83	-0.3
2,300,205	+		DDA3937_RS10195	0.83	+4.8
2,300,205	+		DDA3937_RS10195	0.83	+0.2
2,300,206	-		DDA3937_RS10195	0.83	+0.4
2,300,206	-		DDA3937_RS10195	0.83	-1.2
2,300,206	-		DDA3937_RS10195	0.83	-1.0
2,300,206	-		DDA3937_RS10195	0.83	-0.5
2,300,212	+		DDA3937_RS10195	0.84	-0.5
2,300,212	+		DDA3937_RS10195	0.84	-1.0
2,300,212	+		DDA3937_RS10195	0.84	-1.4
2,300,212	+		DDA3937_RS10195	0.84	+0.8
2,300,212	+		DDA3937_RS10195	0.84	+0.7
2,300,212	+		DDA3937_RS10195	0.84	-0.0
2,300,212	+		DDA3937_RS10195	0.84	+0.5
2,300,213	-		DDA3937_RS10195	0.84	+1.9
2,300,213	-		DDA3937_RS10195	0.84	+0.2
2,300,213	-		DDA3937_RS10195	0.84	-0.3
2,300,213	-		DDA3937_RS10195	0.84	-0.1
2,300,213	-		DDA3937_RS10195	0.84	-2.0
2,300,214	+		DDA3937_RS10195	0.84	-1.6
2,300,214	+		DDA3937_RS10195	0.84	+1.8
2,300,214	+		DDA3937_RS10195	0.84	+1.9
2,300,267	+		DDA3937_RS10195	0.89	-1.5
2,300,372	+				-0.0
2,300,372	+				+0.5
2,300,373	-				+5.4
2,300,373	-				-0.0
2,300,373	-				-0.2
2,300,373	-				-0.9
2,300,376	+				-1.4
2,300,376	+				-1.2
2,300,376	+				+0.3
2,300,377	-				-1.3
2,300,377	-				-1.5
2,300,377	-				-2.2
2,300,377	-				+0.2
2,300,377	-				-1.1
2,300,411	-				-0.6
2,300,411	-				-1.2
2,300,496	+				+1.9
2,300,496	+				-0.5
2,300,496	+				-0.7
2,300,497	-				-0.3
2,300,497	-				-0.3
2,300,540	-				-0.3
2,300,540	-				-1.8
2,300,543	+				-0.9
2,300,543	+				+0.4
2,300,543	+				-1.2
2,300,543	+				+0.3
2,300,543	+				+1.0
2,300,543	+				-0.3
2,300,544	-				-0.2
2,300,544	-				-0.0
2,300,544	-				-0.7
2,300,544	-				+0.0
2,300,544	-				+1.5
2,300,544	-				-1.6
2,300,544	-				-1.6
2,300,544	-				-1.3
2,300,544	-				+0.1
2,300,544	-				+0.7
2,300,544	-				-1.6
2,300,544	-				+0.9
2,300,545	+				-2.2
2,300,545	+				-3.5
2,300,545	+				+0.1
2,300,545	+				+0.2
2,300,545	+				+0.5
2,300,545	+				+1.3
2,300,546	-				-0.3
2,300,546	-				-0.2
2,300,546	-				-1.3
2,300,546	-				+0.6
2,300,546	-				-0.0
2,300,550	-				-1.8
2,300,665	+				-0.2
2,300,728	+				-1.6
2,300,729	-				-1.9
2,300,731	+				+1.5
2,300,731	+				-0.6
2,300,731	+				-1.0
2,300,732	-				-0.7
2,300,732	-				-0.1
2,300,742	-				+0.5
2,300,748	+				+0.0
2,300,748	+				+0.2
2,300,841	+				-0.8
2,300,882	-				+0.1
2,300,887	-				-3.6
2,300,890	-				+1.5
2,300,900	-				-0.8
2,300,963	+				+0.5
2,300,966	-				+1.6
2,300,966	-				-2.2
2,300,966	-				+0.5
2,300,966	-				+1.5
2,300,969	+				-0.9
2,300,970	-				-1.8
2,301,158	+				-0.9
2,301,165	-				+0.2
2,301,165	-				+4.5
2,301,229	-				+0.5
2,301,290	+				-2.3
2,301,290	+				-1.1
2,301,290	+				+0.1
2,301,290	+				-0.8
2,301,290	+				+0.5
2,301,290	+				-0.9
2,301,290	+				-0.1
2,301,290	+				-1.2
2,301,291	-				+0.4
2,301,291	-				-0.8
2,301,291	-				-1.4
2,301,291	-				+1.3
2,301,291	-				+1.7
2,301,291	-				+0.2
2,301,291	-				-0.8
2,301,291	-				-0.1
2,301,291	-				+0.1
2,301,292	+				-0.2
2,301,292	+				+0.0
2,301,293	-				-0.3
2,301,293	-				-0.7