Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS09560

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
2,151,355	+				-0.5
2,151,359	+				-0.4
2,151,360	-				-0.2
2,151,360	-				+0.4
2,151,517	-		DDA3937_RS09550	0.55	-1.6
2,151,564	+		DDA3937_RS09550	0.77	-1.0
2,151,565	-		DDA3937_RS09550	0.77	+0.5
2,151,565	-		DDA3937_RS09550	0.77	-0.0
2,151,565	-		DDA3937_RS09550	0.77	+0.7
2,151,565	-		DDA3937_RS09550	0.77	-2.6
2,151,597	+				-1.8
2,151,597	+				-1.1
2,151,598	-				-1.2
2,151,598	-				+0.4
2,151,598	-				-0.3
2,151,598	-				-0.7
2,151,603	+				+1.6
2,151,603	+				-0.9
2,151,603	+				-1.1
2,151,604	-				-0.3
2,151,633	+				+0.3
2,151,634	-				-0.2
2,151,645	+				-0.4
2,151,645	+				+1.0
2,151,646	-				+0.3
2,151,706	+				+3.2
2,151,707	-				-1.2
2,151,707	-				+0.4
2,151,714	-				-0.9
2,151,781	-				+0.6
2,151,806	-				-0.3
2,151,867	+				+0.6
2,151,868	-				+0.8
2,151,868	-				-0.8
2,151,910	+				+0.7
2,151,911	-				+1.6
2,151,915	-				-0.4
2,151,932	+				+0.6
2,151,949	+				-0.6
2,151,950	-				-0.4
2,151,950	-				-1.2
2,151,950	-				-0.7
2,151,952	+				-1.0
2,151,952	+				+1.2
2,151,988	+		DDA3937_RS09555	0.16	+2.8
2,151,988	+		DDA3937_RS09555	0.16	-0.0
2,151,989	-		DDA3937_RS09555	0.16	+0.3
2,151,989	-		DDA3937_RS09555	0.16	+0.6
2,151,989	-		DDA3937_RS09555	0.16	-3.4
2,151,989	-		DDA3937_RS09555	0.16	+0.6
2,152,002	+		DDA3937_RS09555	0.20	+0.6
2,152,019	+		DDA3937_RS09555	0.25	+1.0
2,152,021	+		DDA3937_RS09555	0.26	-0.3
2,152,021	+		DDA3937_RS09555	0.26	-0.2
2,152,022	-		DDA3937_RS09555	0.26	-0.5
2,152,030	-		DDA3937_RS09555	0.29	-0.3
2,152,030	-		DDA3937_RS09555	0.29	-1.4
2,152,030	-		DDA3937_RS09555	0.29	-1.4
2,152,033	+		DDA3937_RS09555	0.30	-0.1
2,152,033	+		DDA3937_RS09555	0.30	+0.1
2,152,033	+		DDA3937_RS09555	0.30	-1.7
2,152,034	-		DDA3937_RS09555	0.30	-1.2
2,152,034	-		DDA3937_RS09555	0.30	-1.7
2,152,034	-		DDA3937_RS09555	0.30	+1.0
2,152,034	-		DDA3937_RS09555	0.30	-0.6
2,152,047	-		DDA3937_RS09555	0.34	+0.8
2,152,047	-		DDA3937_RS09555	0.34	+0.3
2,152,067	-		DDA3937_RS09555	0.40	+2.6
2,152,094	+		DDA3937_RS09555	0.49	+0.1
2,152,095	-		DDA3937_RS09555	0.49	-0.7
2,152,095	-		DDA3937_RS09555	0.49	-1.2
2,152,100	-		DDA3937_RS09555	0.50	-1.2
2,152,126	+		DDA3937_RS09555	0.59	+0.7
2,152,127	-		DDA3937_RS09555	0.59	-0.2
2,152,127	-		DDA3937_RS09555	0.59	-1.4
2,152,127	-		DDA3937_RS09555	0.59	-0.2
2,152,127	-		DDA3937_RS09555	0.59	-1.0
2,152,136	+		DDA3937_RS09555	0.62	-2.3
2,152,136	+		DDA3937_RS09555	0.62	-0.9
2,152,137	-		DDA3937_RS09555	0.62	-0.7
2,152,164	-		DDA3937_RS09555	0.70	-0.0
2,152,240	+				-1.2
2,152,240	+				-0.2
2,152,241	-				-0.8
2,152,241	-				-0.6
2,152,260	+				-0.2
2,152,287	-				-2.0
2,152,358	+				-0.0
2,152,358	+				-0.9
2,152,359	-				-1.7
2,152,359	-				-0.0
2,152,428	-				+0.2
2,152,488	-				-1.7
2,152,531	+		DDA3937_RS09560	0.11	-2.4
2,152,531	+		DDA3937_RS09560	0.11	-1.0
2,152,531	+		DDA3937_RS09560	0.11	-0.4
2,152,651	-		DDA3937_RS09560	0.16	+0.9
2,152,651	-		DDA3937_RS09560	0.16	+0.4
2,152,683	+		DDA3937_RS09560	0.17	-0.6
2,152,885	+		DDA3937_RS09560	0.26	+0.1
2,152,885	+		DDA3937_RS09560	0.26	+0.9
2,152,885	+		DDA3937_RS09560	0.26	-0.6
2,152,885	+		DDA3937_RS09560	0.26	+1.2
2,152,973	+		DDA3937_RS09560	0.30	-0.9
2,152,974	-		DDA3937_RS09560	0.30	+4.6
2,152,974	-		DDA3937_RS09560	0.30	-0.4
2,153,012	+		DDA3937_RS09560	0.32	-0.8
2,153,012	+		DDA3937_RS09560	0.32	+0.8
2,153,012	+		DDA3937_RS09560	0.32	+0.2
2,153,012	+		DDA3937_RS09560	0.32	-0.4
2,153,012	+		DDA3937_RS09560	0.32	+0.3
2,153,013	-		DDA3937_RS09560	0.32	-1.2
2,153,013	-		DDA3937_RS09560	0.32	-0.4
2,153,058	+		DDA3937_RS09560	0.34	-0.9
2,153,085	-		DDA3937_RS09560	0.35	-1.2
2,153,114	+		DDA3937_RS09560	0.36	-0.5
2,153,150	+		DDA3937_RS09560	0.38	-1.5
2,153,150	+		DDA3937_RS09560	0.38	-0.5
2,153,150	+		DDA3937_RS09560	0.38	+2.0
2,153,150	+		DDA3937_RS09560	0.38	+0.2
2,153,150	+		DDA3937_RS09560	0.38	-1.8
2,153,150	+		DDA3937_RS09560	0.38	-1.6
2,153,150	+		DDA3937_RS09560	0.38	-0.2
2,153,151	-		DDA3937_RS09560	0.38	-0.6
2,153,151	-		DDA3937_RS09560	0.38	-0.3
2,153,151	-		DDA3937_RS09560	0.38	-0.3
2,153,151	-		DDA3937_RS09560	0.38	-2.4
2,153,151	-		DDA3937_RS09560	0.38	-0.2
2,153,151	-		DDA3937_RS09560	0.38	-0.4
2,153,151	-		DDA3937_RS09560	0.38	-0.9
2,153,154	-		DDA3937_RS09560	0.38	-1.1
2,153,154	-		DDA3937_RS09560	0.38	+0.6
2,153,154	-		DDA3937_RS09560	0.38	+0.6
2,153,253	+		DDA3937_RS09560	0.42	-1.4
2,153,253	+		DDA3937_RS09560	0.42	+7.5
2,153,254	-		DDA3937_RS09560	0.42	+3.2
2,153,270	+		DDA3937_RS09560	0.43	+6.0
2,153,270	+		DDA3937_RS09560	0.43	-1.1
2,153,270	+		DDA3937_RS09560	0.43	-2.7
2,153,270	+		DDA3937_RS09560	0.43	+1.2
2,153,270	+		DDA3937_RS09560	0.43	-0.2
2,153,271	-		DDA3937_RS09560	0.43	-0.4
2,153,377	-		DDA3937_RS09560	0.48	-0.2
2,153,377	-		DDA3937_RS09560	0.48	-0.7
2,153,377	-		DDA3937_RS09560	0.48	-0.2
2,153,401	-		DDA3937_RS09560	0.49	-0.8
2,153,445	+		DDA3937_RS09560	0.51	-0.8
2,153,445	+		DDA3937_RS09560	0.51	+1.7
2,153,445	+		DDA3937_RS09560	0.51	-1.3
2,153,445	+		DDA3937_RS09560	0.51	-0.0
2,153,445	+		DDA3937_RS09560	0.51	+0.4
2,153,445	+		DDA3937_RS09560	0.51	-0.6
2,153,445	+		DDA3937_RS09560	0.51	-1.0
2,153,446	-		DDA3937_RS09560	0.51	-0.6
2,153,446	-		DDA3937_RS09560	0.51	+0.6
2,153,450	+		DDA3937_RS09560	0.51	-2.5
2,153,451	-		DDA3937_RS09560	0.51	-2.1
2,153,675	+		DDA3937_RS09560	0.61	+4.0
2,153,800	+		DDA3937_RS09560	0.66	+0.2
2,153,800	+		DDA3937_RS09560	0.66	-0.7
2,153,801	-		DDA3937_RS09560	0.66	-1.9
2,153,801	-		DDA3937_RS09560	0.66	+0.9
2,153,843	+		DDA3937_RS09560	0.68	-0.7
2,153,844	-		DDA3937_RS09560	0.68	-0.0
2,153,844	-		DDA3937_RS09560	0.68	+0.3
2,153,853	+		DDA3937_RS09560	0.69	-1.0
2,153,853	+		DDA3937_RS09560	0.69	+0.4
2,153,853	+		DDA3937_RS09560	0.69	+0.2
2,153,853	+		DDA3937_RS09560	0.69	-1.2
2,153,854	-		DDA3937_RS09560	0.69	-0.9
2,153,854	-		DDA3937_RS09560	0.69	-1.7
2,153,854	-		DDA3937_RS09560	0.69	-0.4
2,153,854	-		DDA3937_RS09560	0.69	-1.3
2,153,867	+		DDA3937_RS09560	0.69	+1.0
2,153,867	+		DDA3937_RS09560	0.69	+0.3
2,153,867	+		DDA3937_RS09560	0.69	+0.4
2,153,867	+		DDA3937_RS09560	0.69	-1.0
2,153,868	-		DDA3937_RS09560	0.69	-1.3
2,153,868	-		DDA3937_RS09560	0.69	-2.2
2,153,868	-		DDA3937_RS09560	0.69	+0.1
2,154,125	+		DDA3937_RS09560	0.81	-0.4
2,154,125	+		DDA3937_RS09560	0.81	-0.6
2,154,125	+		DDA3937_RS09560	0.81	+0.3
2,154,125	+		DDA3937_RS09560	0.81	-2.2
2,154,126	-		DDA3937_RS09560	0.81	-0.0
2,154,126	-		DDA3937_RS09560	0.81	-0.4
2,154,126	-		DDA3937_RS09560	0.81	-0.2
2,154,126	-		DDA3937_RS09560	0.81	-2.4
2,154,126	-		DDA3937_RS09560	0.81	+0.6
2,154,126	-		DDA3937_RS09560	0.81	-2.1
2,154,131	+		DDA3937_RS09560	0.81	-1.2
2,154,132	-		DDA3937_RS09560	0.81	-0.0
2,154,132	-		DDA3937_RS09560	0.81	-1.0
2,154,132	-		DDA3937_RS09560	0.81	+1.7
2,154,132	-		DDA3937_RS09560	0.81	-0.4
2,154,225	-		DDA3937_RS09560	0.85	-1.6
2,154,278	+		DDA3937_RS09560	0.87	-1.3
2,154,279	-		DDA3937_RS09560	0.87	-0.7
2,154,481	+				+0.1
2,154,574	+				-0.5
2,154,575	-				-1.6
2,154,575	-				-0.4
2,154,632	+				-0.0
2,154,633	-				-1.6
2,154,698	+				-1.4
2,154,702	+				-1.0
2,154,757	-				+1.3
2,155,093	-				-1.5
2,155,093	-				-1.0
2,155,111	+				-1.7
2,155,111	+				-0.6
2,155,112	-				+0.1
2,155,112	-				+0.4
2,155,255	+		DDA3937_RS09570	0.20	-1.0
2,155,255	+		DDA3937_RS09570	0.20	-1.1
2,155,255	+		DDA3937_RS09570	0.20	-2.6
2,155,256	-		DDA3937_RS09570	0.21	+0.7
2,155,402	-		DDA3937_RS09570	0.41	-1.3
2,155,402	-		DDA3937_RS09570	0.41	+4.2
2,155,474	+		DDA3937_RS09570	0.50	-0.7
2,155,475	-		DDA3937_RS09570	0.51	-0.5
2,155,476	+		DDA3937_RS09570	0.51	-0.0
2,155,476	+		DDA3937_RS09570	0.51	+0.2
2,155,477	-		DDA3937_RS09570	0.51	+0.6
2,155,477	-		DDA3937_RS09570	0.51	-2.1
2,155,477	-		DDA3937_RS09570	0.51	-1.9
2,155,477	-		DDA3937_RS09570	0.51	-1.2
2,155,477	-		DDA3937_RS09570	0.51	+0.4