Experiment: Norland
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DDA3937_RS19030 and DDA3937_RS19035 are separated by 325 nucleotides DDA3937_RS19035 and DDA3937_RS19040 are separated by 66 nucleotides
DDA3937_RS19030: DDA3937_RS19030 - Na/Pi cotransporter family protein, at 4,347,970 to 4,349,616
_RS19030
DDA3937_RS19035: DDA3937_RS19035 - DASS family sodium-coupled anion symporter, at 4,349,942 to 4,351,396
_RS19035
DDA3937_RS19040: DDA3937_RS19040 - methionine synthase, at 4,351,463 to 4,355,146
_RS19040
Position (kb) 4349
4350
4351
4352 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 4349.061 kb on - strand, within DDA3937_RS19030 at 4349.061 kb on - strand at 4349.104 kb on + strand, within DDA3937_RS19030 at 4349.104 kb on + strand, within DDA3937_RS19030 at 4349.104 kb on + strand, within DDA3937_RS19030 at 4349.104 kb on + strand, within DDA3937_RS19030 at 4349.105 kb on - strand, within DDA3937_RS19030 at 4349.228 kb on - strand, within DDA3937_RS19030 at 4349.269 kb on - strand, within DDA3937_RS19030 at 4349.331 kb on + strand, within DDA3937_RS19030 at 4349.332 kb on - strand, within DDA3937_RS19030 at 4349.332 kb on - strand, within DDA3937_RS19030 at 4349.361 kb on + strand, within DDA3937_RS19030 at 4349.362 kb on - strand, within DDA3937_RS19030 at 4349.531 kb on + strand at 4349.542 kb on - strand at 4349.559 kb on + strand at 4349.560 kb on - strand at 4349.565 kb on + strand at 4349.596 kb on + strand at 4349.596 kb on + strand at 4349.597 kb on - strand at 4349.656 kb on + strand at 4349.657 kb on - strand at 4349.657 kb on - strand at 4349.657 kb on - strand at 4349.657 kb on - strand at 4349.657 kb on - strand at 4349.660 kb on + strand at 4349.661 kb on - strand at 4349.662 kb on + strand at 4349.662 kb on + strand at 4349.662 kb on + strand at 4349.663 kb on - strand at 4349.670 kb on + strand at 4349.671 kb on - strand at 4349.711 kb on + strand at 4349.711 kb on + strand at 4349.711 kb on + strand at 4349.711 kb on + strand at 4349.711 kb on + strand at 4349.711 kb on + strand at 4349.712 kb on - strand at 4349.712 kb on - strand at 4349.759 kb on + strand at 4349.759 kb on + strand at 4349.759 kb on + strand at 4349.759 kb on + strand at 4349.759 kb on + strand at 4349.759 kb on + strand at 4349.759 kb on + strand at 4349.760 kb on - strand at 4349.760 kb on - strand at 4349.760 kb on - strand at 4349.787 kb on + strand at 4349.788 kb on - strand at 4349.788 kb on - strand at 4349.788 kb on - strand at 4349.791 kb on + strand at 4349.791 kb on + strand at 4349.792 kb on - strand at 4349.798 kb on - strand at 4349.819 kb on + strand at 4349.820 kb on - strand at 4349.837 kb on + strand at 4349.838 kb on - strand at 4349.853 kb on + strand at 4349.935 kb on + strand at 4349.935 kb on + strand at 4349.935 kb on + strand at 4349.936 kb on - strand at 4349.937 kb on + strand at 4349.937 kb on + strand at 4349.937 kb on + strand at 4349.937 kb on + strand at 4349.938 kb on - strand at 4349.938 kb on - strand at 4349.938 kb on - strand at 4349.938 kb on - strand at 4350.069 kb on + strand at 4350.069 kb on + strand at 4350.069 kb on + strand at 4350.069 kb on + strand at 4350.070 kb on - strand at 4350.070 kb on - strand at 4350.070 kb on - strand at 4350.070 kb on - strand at 4350.070 kb on - strand at 4350.070 kb on - strand at 4350.136 kb on + strand, within DDA3937_RS19035 at 4350.136 kb on + strand, within DDA3937_RS19035 at 4350.137 kb on - strand, within DDA3937_RS19035 at 4350.140 kb on - strand, within DDA3937_RS19035 at 4350.140 kb on - strand, within DDA3937_RS19035 at 4350.140 kb on - strand, within DDA3937_RS19035 at 4350.140 kb on - strand, within DDA3937_RS19035 at 4350.159 kb on - strand, within DDA3937_RS19035 at 4350.159 kb on - strand, within DDA3937_RS19035 at 4350.159 kb on - strand, within DDA3937_RS19035 at 4350.214 kb on + strand, within DDA3937_RS19035 at 4350.215 kb on - strand, within DDA3937_RS19035 at 4350.300 kb on + strand, within DDA3937_RS19035 at 4350.300 kb on + strand, within DDA3937_RS19035 at 4350.680 kb on + strand, within DDA3937_RS19035 at 4350.680 kb on + strand, within DDA3937_RS19035 at 4350.680 kb on + strand, within DDA3937_RS19035 at 4350.681 kb on - strand, within DDA3937_RS19035 at 4350.681 kb on - strand, within DDA3937_RS19035 at 4350.681 kb on - strand, within DDA3937_RS19035 at 4350.681 kb on - strand, within DDA3937_RS19035 at 4350.681 kb on - strand, within DDA3937_RS19035 at 4350.895 kb on - strand, within DDA3937_RS19035 at 4350.897 kb on + strand, within DDA3937_RS19035 at 4350.898 kb on - strand, within DDA3937_RS19035 at 4351.000 kb on + strand, within DDA3937_RS19035 at 4351.074 kb on + strand, within DDA3937_RS19035 at 4351.074 kb on + strand, within DDA3937_RS19035 at 4351.075 kb on - strand, within DDA3937_RS19035 at 4351.075 kb on - strand, within DDA3937_RS19035 at 4351.075 kb on - strand, within DDA3937_RS19035 at 4351.075 kb on - strand, within DDA3937_RS19035 at 4351.092 kb on - strand, within DDA3937_RS19035 at 4351.097 kb on + strand, within DDA3937_RS19035 at 4351.097 kb on + strand, within DDA3937_RS19035 at 4351.097 kb on + strand, within DDA3937_RS19035 at 4351.098 kb on - strand, within DDA3937_RS19035 at 4351.098 kb on - strand, within DDA3937_RS19035 at 4351.106 kb on + strand, within DDA3937_RS19035 at 4351.146 kb on - strand, within DDA3937_RS19035 at 4351.146 kb on - strand, within DDA3937_RS19035 at 4351.230 kb on - strand, within DDA3937_RS19035 at 4351.247 kb on + strand, within DDA3937_RS19035 at 4351.286 kb on + strand at 4351.286 kb on + strand at 4351.286 kb on + strand at 4351.287 kb on - strand at 4351.287 kb on - strand at 4351.391 kb on + strand at 4351.391 kb on + strand at 4351.401 kb on - strand at 4351.401 kb on - strand at 4351.448 kb on + strand at 4351.476 kb on + strand at 4351.539 kb on + strand at 4351.540 kb on - strand at 4351.581 kb on + strand at 4351.582 kb on - strand at 4351.582 kb on - strand at 4351.582 kb on - strand at 4351.605 kb on + strand at 4351.606 kb on - strand at 4351.660 kb on + strand at 4351.660 kb on + strand at 4351.660 kb on + strand at 4351.661 kb on - strand at 4351.758 kb on + strand at 4351.758 kb on + strand at 4351.758 kb on + strand at 4351.759 kb on - strand at 4351.807 kb on - strand at 4351.807 kb on - strand at 4351.842 kb on + strand, within DDA3937_RS19040 at 4351.843 kb on - strand, within DDA3937_RS19040 at 4351.889 kb on - strand, within DDA3937_RS19040 at 4351.889 kb on - strand, within DDA3937_RS19040 at 4351.899 kb on + strand, within DDA3937_RS19040 at 4351.899 kb on + strand, within DDA3937_RS19040 at 4351.977 kb on + strand, within DDA3937_RS19040 at 4352.025 kb on + strand at 4352.025 kb on + strand, within DDA3937_RS19040 at 4352.025 kb on + strand, within DDA3937_RS19040 at 4352.026 kb on - strand, within DDA3937_RS19040 at 4352.026 kb on - strand, within DDA3937_RS19040 at 4352.026 kb on - strand, within DDA3937_RS19040 at 4352.026 kb on - strand, within DDA3937_RS19040 at 4352.107 kb on - strand, within DDA3937_RS19040 at 4352.107 kb on - strand, within DDA3937_RS19040 at 4352.192 kb on - strand, within DDA3937_RS19040 at 4352.269 kb on - strand, within DDA3937_RS19040 at 4352.293 kb on + strand, within DDA3937_RS19040 at 4352.294 kb on - strand, within DDA3937_RS19040 at 4352.316 kb on + strand, within DDA3937_RS19040 at 4352.317 kb on - strand, within DDA3937_RS19040 at 4352.320 kb on + strand, within DDA3937_RS19040 at 4352.320 kb on + strand, within DDA3937_RS19040 at 4352.321 kb on - strand, within DDA3937_RS19040 at 4352.321 kb on - strand, within DDA3937_RS19040 at 4352.321 kb on - strand, within DDA3937_RS19040 at 4352.383 kb on + strand, within DDA3937_RS19040 at 4352.383 kb on + strand, within DDA3937_RS19040 at 4352.384 kb on - strand, within DDA3937_RS19040 at 4352.385 kb on + strand, within DDA3937_RS19040 at 4352.385 kb on + strand, within DDA3937_RS19040 at 4352.385 kb on + strand, within DDA3937_RS19040 at 4352.385 kb on + strand, within DDA3937_RS19040 at 4352.386 kb on - strand, within DDA3937_RS19040 at 4352.386 kb on - strand, within DDA3937_RS19040 at 4352.386 kb on - strand, within DDA3937_RS19040 at 4352.386 kb on - strand, within DDA3937_RS19040 at 4352.386 kb on - strand, within DDA3937_RS19040 at 4352.386 kb on - strand, within DDA3937_RS19040
Per-strain Table
Position Strand Gene LocusTag Fraction Norland remove 4,349,061 - DDA3937_RS19030 0.66 -0.2 4,349,061 - +3.0 4,349,104 + DDA3937_RS19030 0.69 +0.4 4,349,104 + DDA3937_RS19030 0.69 +0.1 4,349,104 + DDA3937_RS19030 0.69 -2.5 4,349,104 + DDA3937_RS19030 0.69 +0.5 4,349,105 - DDA3937_RS19030 0.69 +1.7 4,349,228 - DDA3937_RS19030 0.76 +0.0 4,349,269 - DDA3937_RS19030 0.79 +0.4 4,349,331 + DDA3937_RS19030 0.83 -0.6 4,349,332 - DDA3937_RS19030 0.83 +0.1 4,349,332 - DDA3937_RS19030 0.83 -0.4 4,349,361 + DDA3937_RS19030 0.84 +1.7 4,349,362 - DDA3937_RS19030 0.85 +1.1 4,349,531 + -0.5 4,349,542 - -1.1 4,349,559 + -0.0 4,349,560 - -0.1 4,349,565 + -1.2 4,349,596 + -1.2 4,349,596 + -0.2 4,349,597 - +0.9 4,349,656 + +0.9 4,349,657 - +0.8 4,349,657 - -1.1 4,349,657 - +0.2 4,349,657 - -0.7 4,349,657 - +1.0 4,349,660 + +2.1 4,349,661 - -0.9 4,349,662 + +0.0 4,349,662 + -1.4 4,349,662 + +0.5 4,349,663 - +0.6 4,349,670 + -1.2 4,349,671 - -2.6 4,349,711 + -0.6 4,349,711 + -0.6 4,349,711 + -0.6 4,349,711 + +1.7 4,349,711 + -1.5 4,349,711 + -0.9 4,349,712 - -0.1 4,349,712 - +1.4 4,349,759 + +1.8 4,349,759 + -3.4 4,349,759 + +1.4 4,349,759 + -1.7 4,349,759 + -0.1 4,349,759 + -1.2 4,349,759 + -1.6 4,349,760 - -0.7 4,349,760 - -2.3 4,349,760 - -1.4 4,349,787 + +1.2 4,349,788 - -0.6 4,349,788 - -0.5 4,349,788 - -0.6 4,349,791 + +0.1 4,349,791 + -0.2 4,349,792 - -1.5 4,349,798 - -0.4 4,349,819 + -0.8 4,349,820 - +3.2 4,349,837 + -1.0 4,349,838 - +0.3 4,349,853 + -0.0 4,349,935 + -1.0 4,349,935 + -1.6 4,349,935 + -3.3 4,349,936 - +0.3 4,349,937 + -0.6 4,349,937 + -0.0 4,349,937 + -1.4 4,349,937 + -0.0 4,349,938 - +0.3 4,349,938 - +0.8 4,349,938 - -0.5 4,349,938 - -0.7 4,350,069 + -0.7 4,350,069 + -1.2 4,350,069 + -1.2 4,350,069 + -0.2 4,350,070 - -1.2 4,350,070 - -1.4 4,350,070 - -0.3 4,350,070 - -1.8 4,350,070 - -2.2 4,350,070 - -0.3 4,350,136 + DDA3937_RS19035 0.13 -1.3 4,350,136 + DDA3937_RS19035 0.13 -1.6 4,350,137 - DDA3937_RS19035 0.13 -1.2 4,350,140 - DDA3937_RS19035 0.14 +0.9 4,350,140 - DDA3937_RS19035 0.14 -1.2 4,350,140 - DDA3937_RS19035 0.14 -1.6 4,350,140 - DDA3937_RS19035 0.14 -2.6 4,350,159 - DDA3937_RS19035 0.15 -1.1 4,350,159 - DDA3937_RS19035 0.15 -1.2 4,350,159 - DDA3937_RS19035 0.15 -1.1 4,350,214 + DDA3937_RS19035 0.19 -0.2 4,350,215 - DDA3937_RS19035 0.19 -1.2 4,350,300 + DDA3937_RS19035 0.25 -1.8 4,350,300 + DDA3937_RS19035 0.25 -0.8 4,350,680 + DDA3937_RS19035 0.51 -1.8 4,350,680 + DDA3937_RS19035 0.51 +0.0 4,350,680 + DDA3937_RS19035 0.51 -1.8 4,350,681 - DDA3937_RS19035 0.51 -1.6 4,350,681 - DDA3937_RS19035 0.51 -0.5 4,350,681 - DDA3937_RS19035 0.51 -1.6 4,350,681 - DDA3937_RS19035 0.51 -2.9 4,350,681 - DDA3937_RS19035 0.51 -1.6 4,350,895 - DDA3937_RS19035 0.65 -1.2 4,350,897 + DDA3937_RS19035 0.66 -0.9 4,350,898 - DDA3937_RS19035 0.66 +0.2 4,351,000 + DDA3937_RS19035 0.73 -1.5 4,351,074 + DDA3937_RS19035 0.78 -2.0 4,351,074 + DDA3937_RS19035 0.78 -1.2 4,351,075 - DDA3937_RS19035 0.78 -1.8 4,351,075 - DDA3937_RS19035 0.78 -1.6 4,351,075 - DDA3937_RS19035 0.78 -0.6 4,351,075 - DDA3937_RS19035 0.78 -2.2 4,351,092 - DDA3937_RS19035 0.79 -2.4 4,351,097 + DDA3937_RS19035 0.79 -0.4 4,351,097 + DDA3937_RS19035 0.79 -2.4 4,351,097 + DDA3937_RS19035 0.79 -0.1 4,351,098 - DDA3937_RS19035 0.79 -0.9 4,351,098 - DDA3937_RS19035 0.79 -0.9 4,351,106 + DDA3937_RS19035 0.80 -2.0 4,351,146 - DDA3937_RS19035 0.83 -0.7 4,351,146 - DDA3937_RS19035 0.83 -0.8 4,351,230 - DDA3937_RS19035 0.89 -1.9 4,351,247 + DDA3937_RS19035 0.90 -0.9 4,351,286 + -1.7 4,351,286 + -1.1 4,351,286 + -2.2 4,351,287 - -1.7 4,351,287 - -2.4 4,351,391 + -3.6 4,351,391 + -2.3 4,351,401 - +0.3 4,351,401 - -0.6 4,351,448 + -1.3 4,351,476 + -0.2 4,351,539 + +0.4 4,351,540 - +0.5 4,351,581 + -1.2 4,351,582 - -2.8 4,351,582 - +0.8 4,351,582 - +0.6 4,351,605 + -0.5 4,351,606 - -1.2 4,351,660 + -2.0 4,351,660 + +0.4 4,351,660 + -0.3 4,351,661 - -0.9 4,351,758 + -0.0 4,351,758 + +0.3 4,351,758 + +0.9 4,351,759 - -1.4 4,351,807 - +0.6 4,351,807 - +0.0 4,351,842 + DDA3937_RS19040 0.10 +1.6 4,351,843 - DDA3937_RS19040 0.10 +0.2 4,351,889 - DDA3937_RS19040 0.12 +0.1 4,351,889 - DDA3937_RS19040 0.12 +1.5 4,351,899 + DDA3937_RS19040 0.12 -0.1 4,351,899 + DDA3937_RS19040 0.12 +0.3 4,351,977 + DDA3937_RS19040 0.14 +1.4 4,352,025 + -0.6 4,352,025 + DDA3937_RS19040 0.15 -0.1 4,352,025 + DDA3937_RS19040 0.15 -0.1 4,352,026 - DDA3937_RS19040 0.15 -0.9 4,352,026 - DDA3937_RS19040 0.15 -2.4 4,352,026 - DDA3937_RS19040 0.15 -1.5 4,352,026 - DDA3937_RS19040 0.15 +0.5 4,352,107 - DDA3937_RS19040 0.17 -0.7 4,352,107 - DDA3937_RS19040 0.17 +0.3 4,352,192 - DDA3937_RS19040 0.20 -0.2 4,352,269 - DDA3937_RS19040 0.22 -1.1 4,352,293 + DDA3937_RS19040 0.23 -1.1 4,352,294 - DDA3937_RS19040 0.23 -1.1 4,352,316 + DDA3937_RS19040 0.23 -0.2 4,352,317 - DDA3937_RS19040 0.23 -0.7 4,352,320 + DDA3937_RS19040 0.23 +0.2 4,352,320 + DDA3937_RS19040 0.23 +0.4 4,352,321 - DDA3937_RS19040 0.23 -1.2 4,352,321 - DDA3937_RS19040 0.23 +1.3 4,352,321 - DDA3937_RS19040 0.23 -0.8 4,352,383 + DDA3937_RS19040 0.25 +3.3 4,352,383 + DDA3937_RS19040 0.25 -0.9 4,352,384 - DDA3937_RS19040 0.25 +0.1 4,352,385 + DDA3937_RS19040 0.25 +0.7 4,352,385 + DDA3937_RS19040 0.25 -0.2 4,352,385 + DDA3937_RS19040 0.25 -0.1 4,352,385 + DDA3937_RS19040 0.25 +1.3 4,352,386 - DDA3937_RS19040 0.25 +0.2 4,352,386 - DDA3937_RS19040 0.25 +1.1 4,352,386 - DDA3937_RS19040 0.25 -2.2 4,352,386 - DDA3937_RS19040 0.25 +0.5 4,352,386 - DDA3937_RS19040 0.25 -2.0 4,352,386 - DDA3937_RS19040 0.25 +0.4
Or see this region's nucleotide sequence