Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS17760

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
4,050,206	-		DDA3937_RS17750	0.88	-0.7
4,050,308	+				-0.0
4,050,309	-				+0.6
4,050,328	+				+0.8
4,050,418	+		DDA3937_RS17755	0.12	+1.0
4,050,418	+		DDA3937_RS17755	0.12	-0.1
4,050,418	+		DDA3937_RS17755	0.12	-0.5
4,050,418	+		DDA3937_RS17755	0.12	-0.1
4,050,419	-		DDA3937_RS17755	0.12	-0.3
4,050,454	+		DDA3937_RS17755	0.17	+0.3
4,050,454	+		DDA3937_RS17755	0.17	-2.5
4,050,455	-		DDA3937_RS17755	0.17	-2.1
4,050,455	-		DDA3937_RS17755	0.17	+1.8
4,050,583	+		DDA3937_RS17755	0.34	-0.3
4,050,584	-		DDA3937_RS17755	0.34	-0.4
4,050,682	+		DDA3937_RS17755	0.47	-1.7
4,050,683	-		DDA3937_RS17755	0.47	-1.5
4,050,683	-		DDA3937_RS17755	0.47	-3.1
4,050,787	+		DDA3937_RS17755	0.61	-0.6
4,050,788	-		DDA3937_RS17755	0.61	+0.0
4,050,789	+		DDA3937_RS17755	0.61	-0.6
4,050,789	+		DDA3937_RS17755	0.61	+0.6
4,050,789	+		DDA3937_RS17755	0.61	-1.7
4,050,789	+		DDA3937_RS17755	0.61	-1.0
4,050,789	+		DDA3937_RS17755	0.61	-1.0
4,050,789	+		DDA3937_RS17755	0.61	-1.0
4,050,790	-		DDA3937_RS17755	0.61	-0.0
4,050,790	-		DDA3937_RS17755	0.61	-0.1
4,050,790	-		DDA3937_RS17755	0.61	-1.9
4,050,790	-		DDA3937_RS17755	0.61	-1.4
4,050,921	+		DDA3937_RS17755	0.79	-0.4
4,051,013	+				+0.6
4,051,103	+				-0.3
4,051,104	-				+0.8
4,051,124	-				+0.5
4,051,131	-				+0.3
4,051,173	+				-0.8
4,051,173	+				-0.4
4,051,174	-				+1.0
4,051,233	-		DDA3937_RS17760	0.15	-0.6
4,051,308	-		DDA3937_RS17760	0.23	-0.5
4,051,308	-		DDA3937_RS17760	0.23	-0.1
4,051,364	+		DDA3937_RS17760	0.29	+0.6
4,051,364	+		DDA3937_RS17760	0.29	-0.1
4,051,364	+		DDA3937_RS17760	0.29	+0.8
4,051,364	+		DDA3937_RS17760	0.29	-0.8
4,051,364	+		DDA3937_RS17760	0.29	+1.3
4,051,365	-		DDA3937_RS17760	0.29	+0.1
4,051,365	-		DDA3937_RS17760	0.29	+0.1
4,051,365	-		DDA3937_RS17760	0.29	+0.3
4,051,365	-		DDA3937_RS17760	0.29	-0.2
4,051,517	+		DDA3937_RS17760	0.45	+0.3
4,051,517	+		DDA3937_RS17760	0.45	-0.2
4,051,517	+		DDA3937_RS17760	0.45	-1.5
4,051,517	+		DDA3937_RS17760	0.45	+0.8
4,051,518	-		DDA3937_RS17760	0.45	+0.3
4,051,518	-		DDA3937_RS17760	0.45	+0.7
4,051,518	-		DDA3937_RS17760	0.45	+0.2
4,051,518	-				+2.3
4,051,520	+		DDA3937_RS17760	0.45	-0.2
4,051,520	+				-1.2
4,051,520	+		DDA3937_RS17760	0.45	+0.2
4,051,520	+		DDA3937_RS17760	0.45	+1.3
4,051,520	+		DDA3937_RS17760	0.45	-0.2
4,051,520	+		DDA3937_RS17760	0.45	-0.2
4,051,520	+		DDA3937_RS17760	0.45	-3.4
4,051,520	+		DDA3937_RS17760	0.45	-0.4
4,051,521	-		DDA3937_RS17760	0.45	-0.6
4,051,521	-		DDA3937_RS17760	0.45	-1.2
4,051,521	-		DDA3937_RS17760	0.45	+2.9
4,051,521	-		DDA3937_RS17760	0.45	-3.2
4,051,574	+		DDA3937_RS17760	0.51	+0.0
4,051,574	+		DDA3937_RS17760	0.51	+0.1
4,051,574	+		DDA3937_RS17760	0.51	+0.2
4,051,574	+		DDA3937_RS17760	0.51	-1.1
4,051,574	+		DDA3937_RS17760	0.51	+0.1
4,051,574	+		DDA3937_RS17760	0.51	-0.3
4,051,575	-		DDA3937_RS17760	0.51	+0.7
4,051,575	-		DDA3937_RS17760	0.51	-1.1
4,051,606	-		DDA3937_RS17760	0.54	-0.5
4,051,702	-		DDA3937_RS17760	0.65	+0.3
4,051,702	-		DDA3937_RS17760	0.65	+0.1
4,051,708	-		DDA3937_RS17760	0.65	-0.1
4,051,754	-		DDA3937_RS17760	0.70	-0.2
4,051,786	+		DDA3937_RS17760	0.73	+0.1
4,051,786	+		DDA3937_RS17760	0.73	-1.7
4,051,787	-		DDA3937_RS17760	0.74	-0.1
4,051,787	-		DDA3937_RS17760	0.74	-1.0
4,051,787	-		DDA3937_RS17760	0.74	-0.5
4,051,787	-		DDA3937_RS17760	0.74	+0.5
4,051,832	+		DDA3937_RS17760	0.78	+0.7
4,051,856	+		DDA3937_RS17760	0.81	+0.3
4,051,856	+		DDA3937_RS17760	0.81	+0.3
4,051,856	+		DDA3937_RS17760	0.81	+0.3
4,051,857	-		DDA3937_RS17760	0.81	+0.2
4,051,857	-		DDA3937_RS17760	0.81	+0.3
4,051,857	-		DDA3937_RS17760	0.81	-0.8
4,051,928	+		DDA3937_RS17760	0.88	+1.1
4,051,928	+		DDA3937_RS17760	0.88	+2.3
4,051,928	+		DDA3937_RS17760	0.88	+6.0
4,051,928	+		DDA3937_RS17760	0.88	+1.7
4,051,928	+		DDA3937_RS17760	0.88	-0.9
4,052,006	+				-2.1
4,052,007	-				-0.2
4,052,010	+				-0.2
4,052,011	-				-0.7
4,052,011	-				+1.3
4,052,011	-				-0.3
4,052,019	-				+0.6
4,052,097	-				-0.7
4,052,305	+				+0.6
4,052,306	-				-2.4
4,052,306	-				-0.8
4,052,422	+		DDA3937_RS17765	0.17	-1.0
4,052,422	+		DDA3937_RS17765	0.17	-0.8
4,052,422	+		DDA3937_RS17765	0.17	-0.3
4,052,422	+		DDA3937_RS17765	0.17	-1.1
4,052,422	+		DDA3937_RS17765	0.17	-3.2
4,052,422	+		DDA3937_RS17765	0.17	+0.3
4,052,423	-		DDA3937_RS17765	0.17	+0.2
4,052,423	-		DDA3937_RS17765	0.17	-0.7
4,052,423	-		DDA3937_RS17765	0.17	-1.2
4,052,423	-		DDA3937_RS17765	0.17	-0.8
4,052,423	-		DDA3937_RS17765	0.17	+1.5
4,052,423	-		DDA3937_RS17765	0.17	-0.2
4,052,423	-		DDA3937_RS17765	0.17	-0.7
4,052,439	+		DDA3937_RS17765	0.19	+0.2
4,052,439	+		DDA3937_RS17765	0.19	+0.3
4,052,439	+		DDA3937_RS17765	0.19	-0.1
4,052,439	+		DDA3937_RS17765	0.19	-0.8
4,052,440	-		DDA3937_RS17765	0.19	+1.1
4,052,440	-		DDA3937_RS17765	0.19	+1.1
4,052,440	-		DDA3937_RS17765	0.19	-1.0
4,052,440	-		DDA3937_RS17765	0.19	+0.3
4,052,440	-		DDA3937_RS17765	0.19	+0.5
4,052,633	-		DDA3937_RS17765	0.42	-0.1