Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS13080

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
2,984,778	+		DDA3937_RS13075	0.52	+0.2
2,984,778	+		DDA3937_RS13075	0.52	-0.8
2,984,802	+		DDA3937_RS13075	0.54	+0.4
2,984,802	+		DDA3937_RS13075	0.54	-1.3
2,984,803	-		DDA3937_RS13075	0.54	+2.5
2,984,924	+		DDA3937_RS13075	0.65	-2.2
2,984,925	-		DDA3937_RS13075	0.65	+0.4
2,984,925	-		DDA3937_RS13075	0.65	-0.2
2,985,100	-		DDA3937_RS13075	0.82	-0.7
2,985,100	-		DDA3937_RS13075	0.82	-1.2
2,985,137	+		DDA3937_RS13075	0.85	+0.6
2,985,138	-		DDA3937_RS13075	0.85	+2.1
2,985,138	-		DDA3937_RS13075	0.85	+0.9
2,985,138	-		DDA3937_RS13075	0.85	-1.3
2,985,151	-		DDA3937_RS13075	0.87	+0.3
2,985,178	-		DDA3937_RS13075	0.89	-0.1
2,985,178	-		DDA3937_RS13075	0.89	-2.7
2,985,254	+				-1.4
2,985,254	+				-0.0
2,985,254	+				+0.3
2,985,254	+				-1.7
2,985,254	+				-1.0
2,985,254	+				-0.9
2,985,255	-				-0.9
2,985,259	+				+1.0
2,985,259	+				-0.9
2,985,259	+				-0.7
2,985,260	-				-1.5
2,985,291	+				-1.3
2,985,291	+				-0.5
2,985,323	-				+0.5
2,985,347	-				-0.1
2,985,367	+				-1.3
2,985,367	+				-0.4
2,985,368	-				-0.8
2,985,371	+				-1.0
2,985,371	+				-1.2
2,985,371	+				+0.3
2,985,371	+				-0.6
2,985,371	+				-0.9
2,985,371	+				+0.1
2,985,371	+				-0.1
2,985,371	+				-1.5
2,985,372	-				-1.5
2,985,372	-				+1.1
2,985,372	-				-1.0
2,985,372	-				-0.8
2,985,372	-				+3.1
2,985,372	-				-0.9
2,985,417	+				+0.5
2,985,418	-				-0.6
2,985,418	-				+0.5
2,985,422	+				+0.1
2,985,422	+				-0.7
2,985,423	-				-0.9
2,985,480	+				+1.2
2,985,482	+				+0.4
2,985,482	+				-0.1
2,985,482	+				+0.1
2,985,483	-				-2.4
2,985,494	+				-0.7
2,985,494	+				-0.0
2,985,494	+				+0.1
2,985,495	-				-0.0
2,985,496	+				+0.6
2,985,496	+				+1.1
2,985,497	-				-0.8
2,985,510	+				-0.3
2,985,511	-				+0.9
2,985,581	+				+0.3
2,985,589	+				+0.0
2,985,589	+				+3.8
2,985,590	-				-0.7
2,985,590	-				-1.2
2,985,590	-				+1.7
2,985,901	+		DDA3937_RS13080	0.23	-0.8
2,985,901	+		DDA3937_RS13080	0.23	-0.2
2,985,901	+		DDA3937_RS13080	0.23	-0.2
2,985,902	-		DDA3937_RS13080	0.23	-1.2
2,985,902	-		DDA3937_RS13080	0.23	-0.7
2,985,902	-		DDA3937_RS13080	0.23	-1.5
2,985,904	+		DDA3937_RS13080	0.23	+0.1
2,985,904	+		DDA3937_RS13080	0.23	+0.5
2,985,904	+		DDA3937_RS13080	0.23	-2.1
2,985,904	+		DDA3937_RS13080	0.23	-0.5
2,985,904	+		DDA3937_RS13080	0.23	-1.0
2,985,904	+		DDA3937_RS13080	0.23	-1.2
2,985,905	-		DDA3937_RS13080	0.23	-0.7
2,985,905	-		DDA3937_RS13080	0.23	-1.0
2,985,916	+		DDA3937_RS13080	0.24	+0.1
2,985,917	-				+1.7
2,985,917	-		DDA3937_RS13080	0.24	+2.4
2,985,969	+		DDA3937_RS13080	0.28	-0.5
2,985,970	-		DDA3937_RS13080	0.28	+0.1
2,986,028	+		DDA3937_RS13080	0.32	-3.0
2,986,029	-		DDA3937_RS13080	0.32	-1.7
2,986,029	-		DDA3937_RS13080	0.32	+0.3
2,986,072	+		DDA3937_RS13080	0.35	+3.2
2,986,072	+		DDA3937_RS13080	0.35	-1.2
2,986,072	+		DDA3937_RS13080	0.35	-1.7
2,986,072	+		DDA3937_RS13080	0.35	+2.6
2,986,072	+		DDA3937_RS13080	0.35	-0.9
2,986,073	-		DDA3937_RS13080	0.35	-0.3
2,986,073	-		DDA3937_RS13080	0.35	-0.8
2,986,073	-		DDA3937_RS13080	0.35	-0.6
2,986,073	-		DDA3937_RS13080	0.35	-1.2
2,986,073	-		DDA3937_RS13080	0.35	+2.4
2,986,073	-		DDA3937_RS13080	0.35	-2.2
2,986,073	-		DDA3937_RS13080	0.35	+1.5
2,986,109	+		DDA3937_RS13080	0.37	+0.5
2,986,109	+		DDA3937_RS13080	0.37	-1.4
2,986,110	-		DDA3937_RS13080	0.37	-0.6
2,986,231	+		DDA3937_RS13080	0.46	-1.1
2,986,231	+		DDA3937_RS13080	0.46	-0.6
2,986,231	+		DDA3937_RS13080	0.46	-0.9
2,986,231	+		DDA3937_RS13080	0.46	-2.6
2,986,231	+		DDA3937_RS13080	0.46	-0.1
2,986,231	+		DDA3937_RS13080	0.46	+0.1
2,986,231	+		DDA3937_RS13080	0.46	-0.2
2,986,231	+		DDA3937_RS13080	0.46	-1.5
2,986,231	+		DDA3937_RS13080	0.46	+0.1
2,986,231	+		DDA3937_RS13080	0.46	-0.5
2,986,231	+		DDA3937_RS13080	0.46	-0.7
2,986,232	-		DDA3937_RS13080	0.46	+1.3
2,986,232	-		DDA3937_RS13080	0.46	-0.4
2,986,286	+		DDA3937_RS13080	0.50	-0.8
2,986,287	-		DDA3937_RS13080	0.50	+0.3
2,986,287	-		DDA3937_RS13080	0.50	-0.2
2,986,288	+		DDA3937_RS13080	0.50	-1.5
2,986,288	+		DDA3937_RS13080	0.50	-0.5
2,986,288	+		DDA3937_RS13080	0.50	-0.2
2,986,289	-		DDA3937_RS13080	0.50	+0.3
2,986,289	-		DDA3937_RS13080	0.50	+0.8
2,986,289	-		DDA3937_RS13080	0.50	+0.7
2,986,289	-		DDA3937_RS13080	0.50	+0.1
2,986,289	-		DDA3937_RS13080	0.50	+1.7
2,986,289	-		DDA3937_RS13080	0.50	-0.8
2,986,298	+		DDA3937_RS13080	0.51	-1.2
2,986,311	+		DDA3937_RS13080	0.51	+0.1
2,986,311	+		DDA3937_RS13080	0.51	+1.9
2,986,311	+				-0.9
2,986,312	-		DDA3937_RS13080	0.52	+0.5
2,986,312	-		DDA3937_RS13080	0.52	+0.7
2,986,359	+		DDA3937_RS13080	0.55	-0.4
2,986,371	-		DDA3937_RS13080	0.56	-0.8
2,986,397	+		DDA3937_RS13080	0.57	-1.5
2,986,397	+		DDA3937_RS13080	0.57	-0.5
2,986,414	+		DDA3937_RS13080	0.59	-1.5
2,986,414	+		DDA3937_RS13080	0.59	+0.9
2,986,414	+		DDA3937_RS13080	0.59	-0.5
2,986,414	+		DDA3937_RS13080	0.59	-2.8
2,986,415	-		DDA3937_RS13080	0.59	-1.9
2,986,415	-		DDA3937_RS13080	0.59	-0.8
2,986,415	-		DDA3937_RS13080	0.59	+0.7
2,986,579	+		DDA3937_RS13080	0.70	-0.4
2,986,579	+		DDA3937_RS13080	0.70	-1.3
2,986,601	-		DDA3937_RS13080	0.72	+0.8
2,986,618	+		DDA3937_RS13080	0.73	-0.5
2,986,619	-		DDA3937_RS13080	0.73	+0.8
2,986,619	-		DDA3937_RS13080	0.73	-0.2
2,986,619	-		DDA3937_RS13080	0.73	-1.0
2,986,619	-		DDA3937_RS13080	0.73	-0.9
2,986,619	-		DDA3937_RS13080	0.73	-0.9
2,986,619	-		DDA3937_RS13080	0.73	-0.6
2,986,700	+		DDA3937_RS13080	0.79	-1.1
2,986,700	+		DDA3937_RS13080	0.79	-0.7
2,986,700	+		DDA3937_RS13080	0.79	+0.7
2,986,700	+		DDA3937_RS13080	0.79	-1.1
2,986,700	+		DDA3937_RS13080	0.79	-0.2
2,986,700	+		DDA3937_RS13080	0.79	-0.5
2,986,700	+		DDA3937_RS13080	0.79	-1.0
2,986,700	+		DDA3937_RS13080	0.79	-1.8
2,986,700	+		DDA3937_RS13080	0.79	-0.2
2,986,700	+		DDA3937_RS13080	0.79	-1.4
2,986,700	+		DDA3937_RS13080	0.79	-0.7
2,986,701	-		DDA3937_RS13080	0.79	+1.3
2,986,701	-		DDA3937_RS13080	0.79	-0.9
2,986,701	-		DDA3937_RS13080	0.79	-2.2
2,986,701	-		DDA3937_RS13080	0.79	+0.3
2,986,701	-		DDA3937_RS13080	0.79	+0.3
2,986,701	-		DDA3937_RS13080	0.79	-0.3
2,986,895	+				-0.5
2,986,895	+				-0.8
2,986,895	+				-1.1
2,986,967	+				+0.5
2,986,972	-				-1.5
2,986,980	+				+1.3
2,986,980	+				-0.5
2,987,006	+				-0.5
2,987,006	+				-2.6
2,987,006	+				-1.9
2,987,006	+				+0.2
2,987,006	+				-0.8
2,987,007	-				+0.2
2,987,007	-				-1.3
2,987,007	-				+0.2
2,987,009	+				-0.2
2,987,009	+				-0.2
2,987,009	+				-0.8
2,987,010	-				-0.1
2,987,010	-				-0.1
2,987,010	-				+2.3
2,987,029	+				+2.1
2,987,029	+				-0.3
2,987,029	+				+0.0
2,987,030	-				+0.9
2,987,039	-				-0.9
2,987,039	-				+1.7
2,987,039	-				-0.4
2,987,096	+				-0.2
2,987,096	+				-0.9
2,987,096	+				-1.5
2,987,096	+				-0.7
2,987,096	+				+0.1
2,987,097	-				-0.6
2,987,097	-				-2.9
2,987,131	-				-0.7
2,987,188	+				-0.2
2,987,217	+				-1.5
2,987,218	-				+1.1
2,987,218	-				-2.0
2,987,431	-		DDA3937_RS13085	0.13	-1.0
2,987,452	-		DDA3937_RS13085	0.16	-1.5
2,987,599	+		DDA3937_RS13085	0.35	-1.0
2,987,599	+		DDA3937_RS13085	0.35	-1.1
2,987,599	+		DDA3937_RS13085	0.35	+0.5
2,987,600	-		DDA3937_RS13085	0.35	+0.8
2,987,600	-		DDA3937_RS13085	0.35	-3.2
2,987,600	-		DDA3937_RS13085	0.35	-0.7
2,987,600	-		DDA3937_RS13085	0.35	+0.9
2,987,601	+		DDA3937_RS13085	0.35	-0.6
2,987,601	+				+0.6
2,987,601	+		DDA3937_RS13085	0.35	-1.2
2,987,601	+		DDA3937_RS13085	0.35	+1.5
2,987,602	-		DDA3937_RS13085	0.35	-0.7
2,987,602	-		DDA3937_RS13085	0.35	-1.2
2,987,602	-		DDA3937_RS13085	0.35	+0.7
2,987,602	-		DDA3937_RS13085	0.35	-0.5
2,987,707	+		DDA3937_RS13085	0.48	+1.1
2,987,708	-		DDA3937_RS13085	0.48	+1.3
2,987,708	-		DDA3937_RS13085	0.48	-1.1
2,987,746	+		DDA3937_RS13085	0.53	+0.8
2,987,817	+		DDA3937_RS13085	0.62	-1.9
2,987,818	-		DDA3937_RS13085	0.62	-1.1
2,987,818	-		DDA3937_RS13085	0.62	+0.8
2,987,818	-		DDA3937_RS13085	0.62	+1.5
2,987,820	+		DDA3937_RS13085	0.62	+1.6
2,987,820	+		DDA3937_RS13085	0.62	+0.9
2,987,820	+		DDA3937_RS13085	0.62	-0.4
2,987,820	+		DDA3937_RS13085	0.62	-0.2
2,987,820	+		DDA3937_RS13085	0.62	+0.1
2,987,820	+		DDA3937_RS13085	0.62	-2.7
2,987,820	+		DDA3937_RS13085	0.62	-1.5
2,987,821	-		DDA3937_RS13085	0.63	+0.4
2,987,821	-		DDA3937_RS13085	0.63	-1.0
2,987,821	-		DDA3937_RS13085	0.63	-1.3
2,987,823	+		DDA3937_RS13085	0.63	-0.3
2,987,823	+		DDA3937_RS13085	0.63	-1.7
2,987,823	+		DDA3937_RS13085	0.63	+1.3
2,987,824	-		DDA3937_RS13085	0.63	+0.1
2,987,824	-		DDA3937_RS13085	0.63	+0.4
2,987,922	-		DDA3937_RS13085	0.75	-1.8