Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS12740

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
2,897,682	+		DDA3937_RS12735	0.67	+0.7
2,897,682	+		DDA3937_RS12735	0.67	-1.0
2,897,682	+		DDA3937_RS12735	0.67	-0.0
2,897,683	-		DDA3937_RS12735	0.67	+0.7
2,897,683	-		DDA3937_RS12735	0.67	+1.3
2,897,683	-		DDA3937_RS12735	0.67	-1.0
2,897,684	+		DDA3937_RS12735	0.67	+0.7
2,897,684	+				-1.0
2,897,684	+		DDA3937_RS12735	0.67	-0.6
2,897,684	+		DDA3937_RS12735	0.67	-0.3
2,897,684	+		DDA3937_RS12735	0.67	+1.0
2,897,684	+		DDA3937_RS12735	0.67	+0.4
2,897,684	+		DDA3937_RS12735	0.67	-0.3
2,897,684	+		DDA3937_RS12735	0.67	-0.4
2,897,684	+		DDA3937_RS12735	0.67	+1.0
2,897,684	+		DDA3937_RS12735	0.67	+0.1
2,897,684	+		DDA3937_RS12735	0.67	-1.2
2,897,684	+		DDA3937_RS12735	0.67	+0.6
2,897,684	+		DDA3937_RS12735	0.67	-0.6
2,897,684	+		DDA3937_RS12735	0.67	-2.1
2,897,685	-		DDA3937_RS12735	0.67	-0.7
2,897,685	-		DDA3937_RS12735	0.67	+0.0
2,897,685	-		DDA3937_RS12735	0.67	-2.1
2,897,685	-		DDA3937_RS12735	0.67	-0.2
2,897,685	-		DDA3937_RS12735	0.67	+1.0
2,897,685	-		DDA3937_RS12735	0.67	-0.2
2,897,685	-		DDA3937_RS12735	0.67	+3.6
2,897,685	-		DDA3937_RS12735	0.67	+0.3
2,897,685	-		DDA3937_RS12735	0.67	-0.1
2,897,685	-		DDA3937_RS12735	0.67	+0.6
2,897,755	+		DDA3937_RS12735	0.75	+0.8
2,897,756	-		DDA3937_RS12735	0.75	+0.7
2,897,756	-		DDA3937_RS12735	0.75	-0.5
2,897,907	+				-2.3
2,897,937	+				-1.0
2,897,937	+				-0.0
2,897,937	+				-0.3
2,897,937	+				-0.0
2,897,938	-				+1.8
2,897,938	-				+2.2
2,897,938	-				+0.2
2,897,947	+				-1.8
2,898,035	-				+0.1
2,898,040	+				+1.0
2,898,041	-				+0.3
2,898,041	-				+2.6
2,898,100	+				-1.7
2,898,107	+				-0.8
2,898,112	+				+0.4
2,898,112	+				-0.8
2,898,112	+				+0.2
2,898,137	+				+1.6
2,898,182	+				-2.6
2,898,182	+				-0.2
2,898,183	-				-0.8
2,898,193	+				-0.6
2,898,193	+				-1.1
2,898,193	+				-0.8
2,898,193	+				+0.4
2,898,194	-				+0.1
2,898,194	-				+0.7
2,898,196	+				-0.0
2,898,215	-				+0.2
2,898,215	-				+1.3
2,898,215	-				-0.1
2,898,256	+				+0.4
2,898,256	+				-0.6
2,898,262	+				-1.0
2,898,362	-				-0.3
2,898,362	-				-0.1
2,898,362	-				-0.4
2,898,377	-				+0.5
2,898,377	-				+0.6
2,898,377	-				+0.4
2,898,380	+				-1.9
2,898,380	+				-0.3
2,898,381	-				-1.5
2,898,383	-				-1.2
2,898,520	+				-2.8
2,898,520	+				+0.1
2,898,521	-				-0.6
2,898,521	-				-1.6
2,898,521	-				-0.3
2,898,521	-				-0.4
2,898,546	+				-1.0
2,898,546	+				-1.0
2,898,546	+				-1.3
2,898,546	+				-2.2
2,898,546	+				-0.2
2,898,546	+				-0.1
2,898,546	+				+1.0
2,898,546	+				+0.4
2,898,546	+				-0.6
2,898,546	+				+0.1
2,898,546	+				+4.2
2,898,546	+				+0.5
2,898,546	+				+0.7
2,898,547	-				-1.2
2,898,547	-				+0.5
2,898,547	-				+0.7
2,898,547	-				-0.3
2,898,547	-				-1.8
2,898,547	-				-1.6
2,898,547	-				+1.0
2,898,547	-				-0.1
2,898,547	-				-1.7
2,898,547	-				-1.0
2,898,547	-				+0.1
2,898,547	-				-2.3
2,898,547	-				+0.6
2,898,547	-				-0.2
2,898,547	-				-0.9
2,898,547	-				-0.1
2,898,548	+				+1.6
2,898,548	+				+0.6
2,898,548	+				+1.2
2,898,548	+				-1.0
2,898,548	+				+1.0
2,898,548	+				+0.1
2,898,548	+				-0.5
2,898,548	+				-0.7
2,898,548	+				-0.5
2,898,548	+				-0.2
2,898,548	+				-0.1
2,898,548	+				-0.1
2,898,548	+				+0.6
2,898,548	+				-0.4
2,898,548	+				-0.0
2,898,548	+				+0.9
2,898,548	+				-1.2
2,898,549	-				+0.4
2,898,549	-				-0.9
2,898,549	-				-0.4
2,898,549	-				+0.6
2,898,549	-				+0.2
2,898,549	-				-0.9
2,898,549	-				-0.9
2,898,549	-				-0.4
2,898,549	-				-0.5
2,898,549	-				-0.3
2,898,549	-				-0.5
2,898,549	-				+0.4
2,898,549	-				+0.4
2,898,549	-				-0.7
2,898,549	-				+1.3
2,898,549	-				+0.7
2,898,549	-				-0.8
2,898,549	-				-0.2
2,898,552	+				+2.6
2,898,552	+				+0.9
2,898,553	-				+1.0
2,898,553	-				+1.1
2,898,553	-				-0.2
2,898,577	+				-0.4
2,898,577	+				-1.8
2,898,577	+				-2.1
2,898,578	-				-1.3
2,898,578	-				-0.5
2,898,578	-				-0.0
2,898,629	-				-1.2
2,898,651	+				+2.2
2,898,651	+				-1.4
2,898,657	+				-0.8
2,898,658	-				-0.5
2,898,682	-				-0.0
2,898,775	+				+1.2
2,898,796	-				+1.3
2,898,796	-				-0.5
2,898,855	+		DDA3937_RS12740	0.14	-0.0
2,898,855	+		DDA3937_RS12740	0.14	-2.2
2,898,963	+		DDA3937_RS12740	0.22	-1.1
2,898,964	-		DDA3937_RS12740	0.22	+0.8
2,898,964	-		DDA3937_RS12740	0.22	+1.5
2,898,964	-		DDA3937_RS12740	0.22	-2.0
2,898,985	+		DDA3937_RS12740	0.23	-1.8
2,898,985	+		DDA3937_RS12740	0.23	-1.2
2,898,985	+		DDA3937_RS12740	0.23	-1.6
2,898,985	+		DDA3937_RS12740	0.23	-0.0
2,898,985	+		DDA3937_RS12740	0.23	-1.0
2,898,986	-		DDA3937_RS12740	0.23	-0.3
2,899,084	-		DDA3937_RS12740	0.30	+1.4
2,899,090	-		DDA3937_RS12740	0.31	-0.6
2,899,378	-		DDA3937_RS12740	0.51	-0.2
2,899,615	+		DDA3937_RS12740	0.68	+1.6
2,899,665	+		DDA3937_RS12740	0.71	-1.4
2,899,821	+		DDA3937_RS12740	0.82	-1.2
2,899,822	-		DDA3937_RS12740	0.82	-0.7
2,899,825	+		DDA3937_RS12740	0.83	+2.0
2,899,825	+		DDA3937_RS12740	0.83	-1.8
2,899,945	+				-0.9
2,899,956	+				+1.4
2,900,000	+				-0.1
2,900,001	-				-1.1
2,900,001	-				-2.5
2,900,057	+				+0.4
2,900,131	+				-1.0
2,900,145	-				-0.0
2,900,159	+				-1.1
2,900,196	+				-1.8
2,900,209	+				+0.1
2,900,210	-				-0.8
2,900,280	-				-2.9
2,900,336	+				+0.2
2,900,756	+				-0.8
2,900,756	+				+0.3
2,900,756	+				-0.7
2,900,756	+				+0.4
2,900,757	-				-0.3
2,900,757	-				+0.1
2,900,757	-				+1.0
2,900,757	-				-0.6
2,900,769	-				-0.1
2,900,845	+				-0.0