Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS09300

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
2,090,390	+		DDA3937_RS09295	0.26	-0.5
2,090,392	+		DDA3937_RS09295	0.26	-0.9
2,090,392	+		DDA3937_RS09295	0.26	-0.2
2,090,393	-		DDA3937_RS09295	0.26	+0.0
2,090,447	+		DDA3937_RS09295	0.31	-0.9
2,090,448	-		DDA3937_RS09295	0.31	+0.6
2,090,448	-		DDA3937_RS09295	0.31	-1.1
2,090,482	+		DDA3937_RS09295	0.34	-0.7
2,090,482	+		DDA3937_RS09295	0.34	-2.1
2,090,483	-		DDA3937_RS09295	0.34	-1.4
2,090,485	+		DDA3937_RS09295	0.35	-0.4
2,090,604	-		DDA3937_RS09295	0.46	-0.0
2,090,627	+		DDA3937_RS09295	0.48	-0.9
2,090,627	+		DDA3937_RS09295	0.48	+0.2
2,090,627	+		DDA3937_RS09295	0.48	-1.1
2,090,627	+		DDA3937_RS09295	0.48	-0.1
2,090,628	-		DDA3937_RS09295	0.48	-2.4
2,090,628	-		DDA3937_RS09295	0.48	-0.8
2,090,628	-		DDA3937_RS09295	0.48	-0.3
2,090,628	-		DDA3937_RS09295	0.48	-0.0
2,090,680	+		DDA3937_RS09295	0.53	-1.1
2,090,681	-		DDA3937_RS09295	0.53	-0.7
2,090,714	+		DDA3937_RS09295	0.56	-0.9
2,090,715	-		DDA3937_RS09295	0.56	+0.3
2,090,783	+		DDA3937_RS09295	0.62	-0.8
2,090,783	+		DDA3937_RS09295	0.62	-1.9
2,090,784	-		DDA3937_RS09295	0.62	-0.6
2,090,784	-		DDA3937_RS09295	0.62	+0.8
2,090,801	+		DDA3937_RS09295	0.64	+0.4
2,090,816	+		DDA3937_RS09295	0.65	+0.3
2,090,817	-		DDA3937_RS09295	0.65	-0.4
2,090,822	-		DDA3937_RS09295	0.66	-1.7
2,090,822	-		DDA3937_RS09295	0.66	+0.1
2,090,842	+		DDA3937_RS09295	0.68	+0.3
2,090,843	-		DDA3937_RS09295	0.68	-0.5
2,090,843	-		DDA3937_RS09295	0.68	-1.5
2,090,886	+		DDA3937_RS09295	0.72	-0.8
2,090,886	+		DDA3937_RS09295	0.72	-1.2
2,090,886	+		DDA3937_RS09295	0.72	-0.7
2,090,886	+		DDA3937_RS09295	0.72	-0.7
2,090,886	+		DDA3937_RS09295	0.72	-1.0
2,090,887	-		DDA3937_RS09295	0.72	-0.1
2,090,895	-		DDA3937_RS09295	0.73	-2.8
2,090,938	+		DDA3937_RS09295	0.77	-0.1
2,090,939	-		DDA3937_RS09295	0.77	-0.3
2,090,951	+		DDA3937_RS09295	0.78	-0.9
2,090,951	+		DDA3937_RS09295	0.78	+0.3
2,090,952	-		DDA3937_RS09295	0.78	+0.2
2,090,952	-		DDA3937_RS09295	0.78	+0.0
2,090,952	-		DDA3937_RS09295	0.78	+0.2
2,090,954	+		DDA3937_RS09295	0.78	-0.0
2,090,954	+		DDA3937_RS09295	0.78	+1.6
2,090,954	+		DDA3937_RS09295	0.78	-0.5
2,090,954	+		DDA3937_RS09295	0.78	-0.7
2,090,954	+		DDA3937_RS09295	0.78	-0.2
2,090,954	+		DDA3937_RS09295	0.78	-0.8
2,090,955	-		DDA3937_RS09295	0.78	-0.0
2,090,986	+		DDA3937_RS09295	0.81	-0.5
2,091,031	+		DDA3937_RS09295	0.85	-1.9
2,091,032	-		DDA3937_RS09295	0.85	+0.0
2,091,032	-		DDA3937_RS09295	0.85	+0.3
2,091,032	-		DDA3937_RS09295	0.85	-0.4
2,091,089	+				+1.5
2,091,093	+				+0.9
2,091,093	+				+0.9
2,091,094	-				-1.6
2,091,262	+				-1.8
2,091,262	+				-0.9
2,091,263	-				-1.8
2,091,393	+				-0.1
2,091,393	+				+0.8
2,091,393	+				-0.8
2,091,394	-				-0.1
2,091,394	-				-1.8
2,091,394	-				-0.6
2,091,437	-				-0.3
2,091,447	+				+0.2
2,091,447	+				-0.7
2,091,448	-				-0.3
2,091,559	+		DDA3937_RS09300	0.18	+0.3
2,091,560	-		DDA3937_RS09300	0.18	+0.0
2,091,561	+		DDA3937_RS09300	0.18	-0.4
2,091,561	+		DDA3937_RS09300	0.18	-0.2
2,091,562	-		DDA3937_RS09300	0.19	-0.1
2,091,562	-		DDA3937_RS09300	0.19	-1.4
2,091,562	-		DDA3937_RS09300	0.19	-0.4
2,091,562	-		DDA3937_RS09300	0.19	+1.1
2,091,747	+		DDA3937_RS09300	0.37	+0.4
2,091,747	+		DDA3937_RS09300	0.37	-0.3
2,091,748	-		DDA3937_RS09300	0.37	+1.1
2,091,778	+		DDA3937_RS09300	0.40	+0.1
2,091,778	+		DDA3937_RS09300	0.40	-0.9
2,091,778	+		DDA3937_RS09300	0.40	+0.3
2,091,778	+		DDA3937_RS09300	0.40	-1.1
2,091,778	+		DDA3937_RS09300	0.40	-0.1
2,091,778	+		DDA3937_RS09300	0.40	-0.3
2,091,778	+		DDA3937_RS09300	0.40	-0.6
2,091,778	+				-0.7
2,091,779	-		DDA3937_RS09300	0.40	+0.1
2,091,779	-		DDA3937_RS09300	0.40	-0.6
2,091,779	-		DDA3937_RS09300	0.40	+2.0
2,091,779	-		DDA3937_RS09300	0.40	+0.6
2,091,779	-		DDA3937_RS09300	0.40	-0.2
2,091,779	-		DDA3937_RS09300	0.40	+3.4
2,091,779	-		DDA3937_RS09300	0.40	-2.8
2,091,779	-		DDA3937_RS09300	0.40	+1.1
2,091,780	+		DDA3937_RS09300	0.40	-0.2
2,091,780	+		DDA3937_RS09300	0.40	-1.3
2,091,780	+		DDA3937_RS09300	0.40	-0.2
2,091,780	+		DDA3937_RS09300	0.40	-1.4
2,091,780	+		DDA3937_RS09300	0.40	-0.4
2,091,780	+		DDA3937_RS09300	0.40	+2.0
2,091,780	+		DDA3937_RS09300	0.40	+0.2
2,091,780	+		DDA3937_RS09300	0.40	-0.3
2,091,780	+		DDA3937_RS09300	0.40	-0.1
2,091,780	+		DDA3937_RS09300	0.40	-0.5
2,091,780	+		DDA3937_RS09300	0.40	+0.2
2,091,780	+		DDA3937_RS09300	0.40	-0.6
2,091,780	+		DDA3937_RS09300	0.40	-1.0
2,091,780	+		DDA3937_RS09300	0.40	+1.6
2,091,780	+		DDA3937_RS09300	0.40	-0.7
2,091,780	+		DDA3937_RS09300	0.40	+0.4
2,091,780	+		DDA3937_RS09300	0.40	-0.1
2,091,780	+		DDA3937_RS09300	0.40	+0.5
2,091,780	+		DDA3937_RS09300	0.40	+0.2
2,091,780	+		DDA3937_RS09300	0.40	-0.4
2,091,780	+		DDA3937_RS09300	0.40	-0.3
2,091,780	+		DDA3937_RS09300	0.40	-0.2
2,091,780	+		DDA3937_RS09300	0.40	-0.9
2,091,780	+		DDA3937_RS09300	0.40	-0.3
2,091,780	+		DDA3937_RS09300	0.40	+0.3
2,091,780	+		DDA3937_RS09300	0.40	+0.0
2,091,780	+		DDA3937_RS09300	0.40	+0.5
2,091,780	+		DDA3937_RS09300	0.40	+0.2
2,091,780	+		DDA3937_RS09300	0.40	-1.9
2,091,780	+		DDA3937_RS09300	0.40	+0.2
2,091,780	+		DDA3937_RS09300	0.40	-0.4
2,091,780	+		DDA3937_RS09300	0.40	-1.2
2,091,780	+		DDA3937_RS09300	0.40	+0.4
2,091,780	+		DDA3937_RS09300	0.40	-1.0
2,091,780	+		DDA3937_RS09300	0.40	-1.7
2,091,780	+		DDA3937_RS09300	0.40	+0.7
2,091,780	+		DDA3937_RS09300	0.40	+4.8
2,091,780	+		DDA3937_RS09300	0.40	-1.5
2,091,780	+		DDA3937_RS09300	0.40	-1.1
2,091,780	+		DDA3937_RS09300	0.40	+1.4
2,091,780	+				+0.3
2,091,780	+		DDA3937_RS09300	0.40	-2.3
2,091,780	+		DDA3937_RS09300	0.40	+0.9
2,091,780	+		DDA3937_RS09300	0.40	+0.7
2,091,780	+		DDA3937_RS09300	0.40	-1.3
2,091,780	+		DDA3937_RS09300	0.40	-0.8
2,091,781	-		DDA3937_RS09300	0.41	-1.1
2,091,781	-		DDA3937_RS09300	0.41	+0.2
2,091,781	-		DDA3937_RS09300	0.41	+1.3
2,091,781	-		DDA3937_RS09300	0.41	-0.9
2,091,781	-		DDA3937_RS09300	0.41	+0.7
2,091,781	-		DDA3937_RS09300	0.41	-0.1
2,091,781	-		DDA3937_RS09300	0.41	-0.2
2,091,781	-		DDA3937_RS09300	0.41	+0.6
2,091,781	-		DDA3937_RS09300	0.41	+0.1
2,091,781	-		DDA3937_RS09300	0.41	-0.8
2,091,781	-		DDA3937_RS09300	0.41	-0.7
2,091,781	-		DDA3937_RS09300	0.41	+1.9
2,091,781	-		DDA3937_RS09300	0.41	+0.5
2,091,781	-		DDA3937_RS09300	0.41	+0.0
2,091,781	-		DDA3937_RS09300	0.41	-2.8
2,091,781	-		DDA3937_RS09300	0.41	-0.1
2,091,781	-		DDA3937_RS09300	0.41	-1.0
2,091,781	-		DDA3937_RS09300	0.41	-0.8
2,091,781	-		DDA3937_RS09300	0.41	-0.2
2,091,781	-		DDA3937_RS09300	0.41	-0.9
2,091,781	-		DDA3937_RS09300	0.41	+0.9
2,091,781	-		DDA3937_RS09300	0.41	+0.0
2,091,781	-		DDA3937_RS09300	0.41	+0.5
2,091,781	-		DDA3937_RS09300	0.41	-1.0
2,091,781	-		DDA3937_RS09300	0.41	-1.2
2,091,781	-		DDA3937_RS09300	0.41	-0.2
2,091,781	-		DDA3937_RS09300	0.41	+0.4
2,091,781	-		DDA3937_RS09300	0.41	+1.1
2,091,781	-				-0.1
2,091,781	-		DDA3937_RS09300	0.41	+0.4
2,091,781	-		DDA3937_RS09300	0.41	-0.7
2,091,781	-		DDA3937_RS09300	0.41	-0.2
2,091,781	-		DDA3937_RS09300	0.41	+0.2
2,091,781	-		DDA3937_RS09300	0.41	-0.7
2,091,781	-		DDA3937_RS09300	0.41	-0.6
2,091,781	-		DDA3937_RS09300	0.41	-1.0
2,091,781	-		DDA3937_RS09300	0.41	+0.9
2,091,781	-		DDA3937_RS09300	0.41	-1.1
2,091,781	-		DDA3937_RS09300	0.41	-1.9
2,091,781	-		DDA3937_RS09300	0.41	+0.9
2,091,781	-		DDA3937_RS09300	0.41	-0.4
2,091,781	-		DDA3937_RS09300	0.41	+0.4
2,091,781	-		DDA3937_RS09300	0.41	+0.3
2,091,782	+		DDA3937_RS09300	0.41	-2.1
2,091,782	+		DDA3937_RS09300	0.41	+0.4
2,091,782	+		DDA3937_RS09300	0.41	+1.9
2,091,782	+		DDA3937_RS09300	0.41	+0.2
2,091,782	+		DDA3937_RS09300	0.41	+0.5
2,091,782	+		DDA3937_RS09300	0.41	-2.9
2,091,782	+		DDA3937_RS09300	0.41	-0.7
2,091,782	+		DDA3937_RS09300	0.41	+0.2
2,091,782	+		DDA3937_RS09300	0.41	-1.9
2,091,783	-		DDA3937_RS09300	0.41	+1.6
2,091,783	-		DDA3937_RS09300	0.41	+0.2
2,091,783	-		DDA3937_RS09300	0.41	+0.6
2,091,783	-		DDA3937_RS09300	0.41	+0.9
2,091,783	-		DDA3937_RS09300	0.41	-0.7
2,091,783	-		DDA3937_RS09300	0.41	+0.4
2,091,783	-		DDA3937_RS09300	0.41	+1.8
2,091,783	-		DDA3937_RS09300	0.41	+0.1
2,091,783	-		DDA3937_RS09300	0.41	-0.5
2,091,783	-		DDA3937_RS09300	0.41	+0.8
2,091,783	-		DDA3937_RS09300	0.41	-0.7
2,091,788	+		DDA3937_RS09300	0.41	+0.3
2,091,789	-		DDA3937_RS09300	0.41	-1.1
2,091,789	-		DDA3937_RS09300	0.41	-0.4
2,091,789	-		DDA3937_RS09300	0.41	-1.2
2,091,898	+		DDA3937_RS09300	0.52	+1.4
2,091,898	+		DDA3937_RS09300	0.52	+0.6
2,091,898	+		DDA3937_RS09300	0.52	+0.3
2,091,899	-		DDA3937_RS09300	0.52	-0.7
2,091,899	-		DDA3937_RS09300	0.52	-1.8
2,091,921	+		DDA3937_RS09300	0.55	+0.1
2,091,927	+		DDA3937_RS09300	0.55	+0.3
2,091,927	+		DDA3937_RS09300	0.55	-0.7
2,091,927	+		DDA3937_RS09300	0.55	-2.1
2,091,928	-		DDA3937_RS09300	0.55	+0.8
2,091,928	-		DDA3937_RS09300	0.55	-2.3
2,091,928	-		DDA3937_RS09300	0.55	+0.6
2,091,928	-		DDA3937_RS09300	0.55	+0.4
2,091,928	-		DDA3937_RS09300	0.55	+0.6
2,092,216	+		DDA3937_RS09300	0.84	-0.0
2,092,308	+				-2.0
2,092,308	+				-1.9
2,092,309	-				-1.2
2,092,309	-				-2.8
2,092,309	-				-1.0
2,092,394	+				-0.2
2,092,399	+				-2.8
2,092,400	-				-1.1
2,092,400	-				+0.3
2,092,400	-				-1.0
2,092,400	-				-1.9
2,092,400	-				+0.9
2,092,446	+				-2.0
2,092,446	+				+0.4
2,092,447	-				+0.9
2,092,447	-				-0.4
2,092,515	-				+0.2
2,092,515	-				+0.8
2,092,641	+		DDA3937_RS09305	0.18	+1.6
2,092,641	+		DDA3937_RS09305	0.18	-1.7
2,093,035	+		DDA3937_RS09305	0.44	-1.3
2,093,035	+		DDA3937_RS09305	0.44	-1.0
2,093,265	+		DDA3937_RS09305	0.59	-0.4