Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS18315

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
4,182,695	+		DDA3937_RS18310	0.56	-3.2
4,182,695	+		DDA3937_RS18310	0.56	-3.8
4,182,695	+		DDA3937_RS18310	0.56	-0.3
4,182,695	+		DDA3937_RS18310	0.56	-1.6
4,182,696	-		DDA3937_RS18310	0.56	-1.0
4,182,696	-		DDA3937_RS18310	0.56	+1.0
4,182,696	-		DDA3937_RS18310	0.56	-2.8
4,182,696	-		DDA3937_RS18310	0.56	-2.7
4,182,697	+		DDA3937_RS18310	0.56	-3.2
4,182,697	+		DDA3937_RS18310	0.56	-2.3
4,182,697	+		DDA3937_RS18310	0.56	-0.7
4,182,697	+		DDA3937_RS18310	0.56	-2.3
4,182,697	+		DDA3937_RS18310	0.56	-1.6
4,182,697	+		DDA3937_RS18310	0.56	-0.7
4,182,697	+		DDA3937_RS18310	0.56	+1.6
4,182,697	+		DDA3937_RS18310	0.56	-1.9
4,182,697	+		DDA3937_RS18310	0.56	-4.7
4,182,698	-		DDA3937_RS18310	0.56	-5.0
4,182,698	-		DDA3937_RS18310	0.56	-1.9
4,182,698	-		DDA3937_RS18310	0.56	-1.0
4,182,698	-		DDA3937_RS18310	0.56	+1.1
4,182,698	-		DDA3937_RS18310	0.56	-1.2
4,182,698	-		DDA3937_RS18310	0.56	-1.4
4,182,698	-		DDA3937_RS18310	0.56	-3.0
4,182,926	-		DDA3937_RS18310	0.76	-2.7
4,182,946	-		DDA3937_RS18310	0.78	-2.3
4,182,946	-		DDA3937_RS18310	0.78	-3.1
4,183,030	+		DDA3937_RS18310	0.85	-4.6
4,183,031	-		DDA3937_RS18310	0.85	-1.6
4,183,031	-		DDA3937_RS18310	0.85	-2.0
4,183,034	+		DDA3937_RS18310	0.86	-1.0
4,183,034	+		DDA3937_RS18310	0.86	-1.2
4,183,034	+		DDA3937_RS18310	0.86	-2.0
4,183,034	+				-1.0
4,183,034	+		DDA3937_RS18310	0.86	-1.9
4,183,034	+		DDA3937_RS18310	0.86	-3.5
4,183,034	+		DDA3937_RS18310	0.86	-2.7
4,183,034	+		DDA3937_RS18310	0.86	-2.4
4,183,034	+		DDA3937_RS18310	0.86	-1.7
4,183,034	+		DDA3937_RS18310	0.86	-1.6
4,183,034	+		DDA3937_RS18310	0.86	-1.7
4,183,034	+		DDA3937_RS18310	0.86	-1.0
4,183,034	+		DDA3937_RS18310	0.86	-1.9
4,183,035	-		DDA3937_RS18310	0.86	-1.4
4,183,035	-		DDA3937_RS18310	0.86	-3.2
4,183,035	-		DDA3937_RS18310	0.86	-1.1
4,183,035	-		DDA3937_RS18310	0.86	-2.3
4,183,035	-		DDA3937_RS18310	0.86	-3.1
4,183,035	-		DDA3937_RS18310	0.86	-3.5
4,183,035	-		DDA3937_RS18310	0.86	-3.7
4,183,035	-		DDA3937_RS18310	0.86	-0.9
4,183,035	-		DDA3937_RS18310	0.86	-0.4
4,183,035	-		DDA3937_RS18310	0.86	+0.6
4,183,035	-		DDA3937_RS18310	0.86	-4.8
4,183,035	-		DDA3937_RS18310	0.86	-3.5
4,183,035	-		DDA3937_RS18310	0.86	-1.4
4,183,057	+		DDA3937_RS18310	0.88	-0.4
4,183,058	-		DDA3937_RS18310	0.88	-2.6
4,183,058	-		DDA3937_RS18310	0.88	-2.0
4,183,058	-		DDA3937_RS18310	0.88	-1.7
4,183,101	-				-2.0
4,183,259	+				-1.0
4,183,259	+				-0.4
4,183,259	+				-2.4
4,183,259	+				+0.6
4,183,259	+				-3.3
4,183,259	+				-2.6
4,183,259	+				+0.1
4,183,260	-				-0.7
4,183,260	-				+1.4
4,183,260	-				-0.9
4,183,260	-				+0.4
4,183,260	-				+0.0
4,183,260	-				+1.0
4,183,260	-				+1.6
4,183,260	-				-1.2
4,183,282	+				-2.3
4,183,282	+				+0.6
4,183,283	-				-0.6
4,183,283	-				-0.1
4,183,283	-				-0.5
4,183,330	+				-0.9
4,183,330	+				-1.6
4,183,330	+				-1.1
4,183,331	-				+0.6
4,183,337	+				-1.5
4,183,337	+				-1.4
4,183,337	+				+0.1
4,183,374	-				-1.2
4,183,381	+				+0.6
4,183,453	+				+2.0
4,183,454	-				-0.5
4,183,454	-				-0.6
4,183,644	-				-1.7
4,184,475	-				-1.5
4,184,475	-				-0.7
4,184,487	+				-1.6
4,184,487	+				-0.4
4,184,487	+				+0.8
4,184,487	+				-0.2
4,184,488	-				+0.2
4,184,559	+				+0.6
4,184,560	-				+1.0
4,184,560	-				+1.0
4,184,564	-				-2.1
4,184,603	+				-1.7
4,184,604	-				-2.9
4,184,604	-				-1.3
4,184,655	+				-0.8
4,184,656	-				+0.6
4,184,846	-		DDA3937_RS18320	0.14	+0.5
4,184,876	-		DDA3937_RS18320	0.18	-0.3
4,184,876	-		DDA3937_RS18320	0.18	+1.1
4,184,911	+		DDA3937_RS18320	0.21	+0.7
4,184,911	+		DDA3937_RS18320	0.21	+0.5
4,184,911	+		DDA3937_RS18320	0.21	+1.4
4,184,925	+		DDA3937_RS18320	0.23	+3.9
4,184,925	+		DDA3937_RS18320	0.23	+0.8
4,184,925	+		DDA3937_RS18320	0.23	-1.0
4,184,925	+		DDA3937_RS18320	0.23	+0.0
4,184,925	+		DDA3937_RS18320	0.23	+0.1
4,184,926	-		DDA3937_RS18320	0.23	+1.9
4,184,926	-		DDA3937_RS18320	0.23	+1.2
4,184,926	-		DDA3937_RS18320	0.23	-0.7
4,184,926	-		DDA3937_RS18320	0.23	+1.6
4,184,937	-		DDA3937_RS18320	0.24	-1.7
4,184,968	+		DDA3937_RS18320	0.28	-2.1
4,185,059	+		DDA3937_RS18320	0.37	-0.1
4,185,200	+		DDA3937_RS18320	0.53	+0.4
4,185,201	-		DDA3937_RS18320	0.53	+0.7
4,185,212	+		DDA3937_RS18320	0.54	+1.2
4,185,246	-		DDA3937_RS18320	0.58	+0.9
4,185,307	+		DDA3937_RS18320	0.64	-0.3
4,185,307	+		DDA3937_RS18320	0.64	-0.2
4,185,307	+		DDA3937_RS18320	0.64	+0.2
4,185,307	+		DDA3937_RS18320	0.64	-0.6
4,185,307	+		DDA3937_RS18320	0.64	-0.1
4,185,307	+		DDA3937_RS18320	0.64	+0.3
4,185,307	+		DDA3937_RS18320	0.64	-0.7
4,185,307	+		DDA3937_RS18320	0.64	+1.5
4,185,308	-		DDA3937_RS18320	0.65	-0.2
4,185,308	-		DDA3937_RS18320	0.65	-0.2
4,185,308	-		DDA3937_RS18320	0.65	-0.2
4,185,308	-		DDA3937_RS18320	0.65	+0.3
4,185,308	-		DDA3937_RS18320	0.65	-0.3
4,185,308	-		DDA3937_RS18320	0.65	-1.4
4,185,308	-		DDA3937_RS18320	0.65	-0.1
4,185,308	-		DDA3937_RS18320	0.65	-2.7
4,185,394	+		DDA3937_RS18320	0.74	-0.1
4,185,394	+		DDA3937_RS18320	0.74	-0.6
4,185,394	+		DDA3937_RS18320	0.74	+0.7
4,185,395	-		DDA3937_RS18320	0.74	+0.6
4,185,395	-		DDA3937_RS18320	0.74	+1.6
4,185,395	-		DDA3937_RS18320	0.74	+0.9