Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS09185

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
2,062,658	-				+0.1
2,062,658	-				-0.9
2,062,718	+		DDA3937_RS09180	0.11	-1.6
2,062,723	+		DDA3937_RS09180	0.12	-0.6
2,062,839	+		DDA3937_RS09180	0.23	+0.3
2,062,840	-		DDA3937_RS09180	0.23	-0.1
2,062,840	-		DDA3937_RS09180	0.23	+0.1
2,062,929	+		DDA3937_RS09180	0.32	+0.2
2,062,930	-		DDA3937_RS09180	0.32	-1.9
2,062,930	-		DDA3937_RS09180	0.32	-0.5
2,063,036	+		DDA3937_RS09180	0.42	-0.1
2,063,036	+		DDA3937_RS09180	0.42	+0.1
2,063,114	+		DDA3937_RS09180	0.50	+0.1
2,063,115	-		DDA3937_RS09180	0.50	-0.3
2,063,128	-		DDA3937_RS09180	0.51	-2.7
2,063,131	-		DDA3937_RS09180	0.51	+0.1
2,063,147	+		DDA3937_RS09180	0.53	-0.7
2,063,147	+		DDA3937_RS09180	0.53	-2.4
2,063,148	-		DDA3937_RS09180	0.53	+0.5
2,063,148	-		DDA3937_RS09180	0.53	-1.9
2,063,148	-		DDA3937_RS09180	0.53	-2.6
2,063,217	+		DDA3937_RS09180	0.60	+0.6
2,063,217	+		DDA3937_RS09180	0.60	-0.1
2,063,310	+		DDA3937_RS09180	0.69	+2.6
2,063,310	+		DDA3937_RS09180	0.69	-0.9
2,063,310	+		DDA3937_RS09180	0.69	-2.3
2,063,310	+		DDA3937_RS09180	0.69	-2.3
2,063,311	-		DDA3937_RS09180	0.69	-0.4
2,063,311	-		DDA3937_RS09180	0.69	-0.3
2,063,668	-				-1.1
2,063,668	-				-1.9
2,063,668	-				+0.4
2,063,668	-				+0.7
2,063,669	+				-0.6
2,063,669	+				+0.1
2,063,669	+				-0.9
2,063,669	+				-1.4
2,063,669	+				-1.7
2,063,669	+				+0.1
2,063,669	+				-2.3
2,063,670	-				-0.7
2,063,670	-				-0.7
2,063,670	-				+0.1
2,063,670	-				-0.4
2,063,670	-				-0.3
2,063,670	-				-1.7
2,063,720	+				-1.1
2,063,720	+				-0.9
2,063,720	+				-3.0
2,063,755	+		DDA3937_RS09185	0.12	+0.8
2,063,755	+		DDA3937_RS09185	0.12	-1.3
2,063,755	+		DDA3937_RS09185	0.12	-0.9
2,063,756	-		DDA3937_RS09185	0.12	-0.5
2,063,756	-		DDA3937_RS09185	0.12	-1.7
2,063,756	-		DDA3937_RS09185	0.12	-1.0
2,063,756	-		DDA3937_RS09185	0.12	-1.9
2,063,826	+		DDA3937_RS09185	0.18	-0.7
2,063,948	+		DDA3937_RS09185	0.29	+0.1
2,063,948	+		DDA3937_RS09185	0.29	-1.3
2,063,948	+		DDA3937_RS09185	0.29	-1.9
2,063,948	+		DDA3937_RS09185	0.29	-0.7
2,063,948	+		DDA3937_RS09185	0.29	-0.5
2,063,948	+		DDA3937_RS09185	0.29	-0.7
2,063,949	-				-1.3
2,063,949	-		DDA3937_RS09185	0.29	-2.6
2,063,949	-		DDA3937_RS09185	0.29	-1.1
2,063,949	-		DDA3937_RS09185	0.29	+3.0
2,064,053	+		DDA3937_RS09185	0.39	-1.9
2,064,132	-		DDA3937_RS09185	0.46	-0.3
2,064,202	-		DDA3937_RS09185	0.52	-1.9
2,064,202	-		DDA3937_RS09185	0.52	-0.9
2,064,205	+		DDA3937_RS09185	0.53	-1.5
2,064,206	-		DDA3937_RS09185	0.53	-0.2
2,064,206	-		DDA3937_RS09185	0.53	-2.5
2,064,210	+		DDA3937_RS09185	0.53	+2.3
2,064,210	+		DDA3937_RS09185	0.53	-2.4
2,064,211	-		DDA3937_RS09185	0.53	-0.8
2,064,211	-		DDA3937_RS09185	0.53	+0.4
2,064,211	-		DDA3937_RS09185	0.53	-0.4
2,064,281	+		DDA3937_RS09185	0.60	-0.3
2,064,281	+		DDA3937_RS09185	0.60	-1.4
2,064,281	+		DDA3937_RS09185	0.60	-1.5
2,064,282	-		DDA3937_RS09185	0.60	+0.2
2,064,312	-		DDA3937_RS09185	0.62	-1.5
2,064,328	-		DDA3937_RS09185	0.64	+0.5
2,064,328	-		DDA3937_RS09185	0.64	+0.6
2,064,391	+		DDA3937_RS09185	0.70	+0.3
2,064,392	-		DDA3937_RS09185	0.70	-2.1
2,064,392	-		DDA3937_RS09185	0.70	-2.1
2,064,396	-				-1.5
2,064,396	-		DDA3937_RS09185	0.70	-0.4
2,064,396	-		DDA3937_RS09185	0.70	-0.1
2,064,435	+		DDA3937_RS09185	0.74	-1.5
2,064,500	+		DDA3937_RS09185	0.80	-1.7
2,064,649	-				-2.3
2,064,697	+				+2.7
2,064,697	+				+1.5
2,064,698	-				+2.1
2,064,698	-				-1.2
2,064,713	+				-0.2
2,064,713	+				-1.2
2,064,714	-				+0.3
2,064,766	-				-2.1
2,064,777	-				-0.3
2,064,777	-				-1.3
2,064,777	-				-0.6
2,064,801	+				-2.3
2,064,802	-				-1.4
2,064,803	+				-0.5
2,064,803	+				-1.3
2,064,803	+				+0.2
2,064,804	-				-1.7
2,064,835	-				+0.3
2,064,866	+				-0.2
2,064,867	-				-1.9
2,064,877	+				-1.3
2,065,012	-		DDA3937_RS09190	0.15	-1.1
2,065,013	+		DDA3937_RS09190	0.15	-0.5
2,065,013	+		DDA3937_RS09190	0.15	-1.4
2,065,013	+		DDA3937_RS09190	0.15	+0.1
2,065,013	+		DDA3937_RS09190	0.15	-0.9
2,065,014	-		DDA3937_RS09190	0.15	-0.5
2,065,014	-		DDA3937_RS09190	0.15	+2.5
2,065,014	-		DDA3937_RS09190	0.15	-1.5
2,065,026	+				+0.5
2,065,026	+		DDA3937_RS09190	0.16	-0.4
2,065,027	-		DDA3937_RS09190	0.16	-0.3
2,065,027	-		DDA3937_RS09190	0.16	+5.3
2,065,027	-		DDA3937_RS09190	0.16	-1.9
2,065,186	-		DDA3937_RS09190	0.25	-0.2
2,065,186	-		DDA3937_RS09190	0.25	-0.9
2,065,186	-		DDA3937_RS09190	0.25	+0.5
2,065,186	-		DDA3937_RS09190	0.25	-1.8
2,065,205	+		DDA3937_RS09190	0.26	+0.7
2,065,205	+		DDA3937_RS09190	0.26	-0.4
2,065,205	+		DDA3937_RS09190	0.26	-0.5
2,065,205	+		DDA3937_RS09190	0.26	-0.4
2,065,205	+		DDA3937_RS09190	0.26	+0.1
2,065,206	-		DDA3937_RS09190	0.26	-0.3
2,065,206	-		DDA3937_RS09190	0.26	-0.5
2,065,206	-		DDA3937_RS09190	0.26	+0.4
2,065,206	-		DDA3937_RS09190	0.26	-1.1
2,065,505	+		DDA3937_RS09190	0.43	+2.7
2,065,505	+				-1.5
2,065,505	+		DDA3937_RS09190	0.43	-0.5
2,065,505	+		DDA3937_RS09190	0.43	-0.2
2,065,506	-		DDA3937_RS09190	0.43	-1.3
2,065,506	-		DDA3937_RS09190	0.43	+0.9
2,065,506	-		DDA3937_RS09190	0.43	-0.9
2,065,506	-		DDA3937_RS09190	0.43	-0.7
2,065,512	+		DDA3937_RS09190	0.43	+0.3
2,065,528	-		DDA3937_RS09190	0.44	+0.1
2,065,605	+		DDA3937_RS09190	0.48	+0.2
2,065,680	+		DDA3937_RS09190	0.52	-0.6
2,065,692	-		DDA3937_RS09190	0.53	-0.3