Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS19060

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
4,358,342	+		DDA3937_RS19055	0.27	-0.4
4,358,343	-		DDA3937_RS19055	0.27	-1.1
4,358,453	+		DDA3937_RS19055	0.36	-0.3
4,358,454	-		DDA3937_RS19055	0.36	-2.3
4,358,501	+		DDA3937_RS19055	0.40	-0.8
4,358,501	+		DDA3937_RS19055	0.40	+0.5
4,358,501	+		DDA3937_RS19055	0.40	-0.3
4,358,546	+		DDA3937_RS19055	0.43	-1.5
4,358,592	+		DDA3937_RS19055	0.46	-0.7
4,358,697	+		DDA3937_RS19055	0.55	-0.7
4,358,910	+		DDA3937_RS19055	0.71	-1.8
4,358,910	+		DDA3937_RS19055	0.71	-1.2
4,358,910	+		DDA3937_RS19055	0.71	-1.8
4,358,911	-		DDA3937_RS19055	0.71	-0.7
4,358,911	-		DDA3937_RS19055	0.71	-0.1
4,358,911	-		DDA3937_RS19055	0.71	+0.9
4,358,911	-		DDA3937_RS19055	0.71	+0.3
4,358,911	-		DDA3937_RS19055	0.71	-1.1
4,358,911	-		DDA3937_RS19055	0.71	-1.2
4,358,920	-		DDA3937_RS19055	0.72	+0.5
4,358,920	-		DDA3937_RS19055	0.72	-2.7
4,358,920	-		DDA3937_RS19055	0.72	-1.2
4,358,929	+		DDA3937_RS19055	0.72	+2.7
4,358,930	-		DDA3937_RS19055	0.72	+0.4
4,358,930	-		DDA3937_RS19055	0.72	-1.0
4,358,930	-		DDA3937_RS19055	0.72	-0.1
4,358,955	-		DDA3937_RS19055	0.74	-1.0
4,359,023	+		DDA3937_RS19055	0.79	-0.4
4,359,023	+		DDA3937_RS19055	0.79	-0.8
4,359,023	+		DDA3937_RS19055	0.79	-1.5
4,359,023	+		DDA3937_RS19055	0.79	+0.3
4,359,023	+		DDA3937_RS19055	0.79	-1.7
4,359,024	-		DDA3937_RS19055	0.80	+0.1
4,359,024	-		DDA3937_RS19055	0.80	+0.7
4,359,024	-		DDA3937_RS19055	0.80	-0.7
4,359,024	-		DDA3937_RS19055	0.80	-2.5
4,359,024	-		DDA3937_RS19055	0.80	+0.5
4,359,095	+		DDA3937_RS19055	0.85	-0.9
4,359,111	+		DDA3937_RS19055	0.86	+0.5
4,359,111	+		DDA3937_RS19055	0.86	-1.2
4,359,160	-		DDA3937_RS19055	0.90	-0.5
4,359,160	-		DDA3937_RS19055	0.90	-0.2
4,359,160	-		DDA3937_RS19055	0.90	+0.7
4,359,291	+				+0.3
4,359,316	+				-0.9
4,359,316	+				-0.6
4,359,324	+				-2.0
4,359,324	+				-1.4
4,359,324	+				+1.2
4,359,339	+				-1.7
4,359,483	+		DDA3937_RS19060	0.11	-0.4
4,359,484	-		DDA3937_RS19060	0.11	-0.3
4,359,551	+		DDA3937_RS19060	0.15	+0.0
4,359,552	-		DDA3937_RS19060	0.15	+2.6
4,359,634	+		DDA3937_RS19060	0.20	-2.5
4,359,634	+		DDA3937_RS19060	0.20	-0.8
4,359,634	+		DDA3937_RS19060	0.20	+1.1
4,359,635	-		DDA3937_RS19060	0.20	-0.2
4,359,635	-		DDA3937_RS19060	0.20	-0.3
4,359,635	-		DDA3937_RS19060	0.20	+0.1
4,359,666	-		DDA3937_RS19060	0.22	+1.1
4,359,743	+		DDA3937_RS19060	0.27	+0.7
4,359,743	+		DDA3937_RS19060	0.27	-1.8
4,359,744	-		DDA3937_RS19060	0.27	-0.4
4,360,069	+		DDA3937_RS19060	0.47	+1.1
4,360,079	+		DDA3937_RS19060	0.48	-2.0
4,360,079	+		DDA3937_RS19060	0.48	+0.5
4,360,233	+		DDA3937_RS19060	0.57	+1.9
4,360,233	+		DDA3937_RS19060	0.57	+0.3
4,360,234	-		DDA3937_RS19060	0.57	-0.5
4,360,234	-		DDA3937_RS19060	0.57	-0.9
4,360,234	-		DDA3937_RS19060	0.57	+0.4
4,360,234	-		DDA3937_RS19060	0.57	+0.8
4,360,234	-		DDA3937_RS19060	0.57	+0.3
4,360,283	-		DDA3937_RS19060	0.61	+1.2
4,360,289	-		DDA3937_RS19060	0.61	+5.2
4,360,321	+		DDA3937_RS19060	0.63	-0.9
4,360,321	+		DDA3937_RS19060	0.63	+0.9
4,360,456	+		DDA3937_RS19060	0.71	+0.7
4,360,457	-		DDA3937_RS19060	0.71	-1.0
4,360,457	-		DDA3937_RS19060	0.71	+1.7
4,360,478	+		DDA3937_RS19060	0.73	+0.3
4,360,479	-		DDA3937_RS19060	0.73	-1.3
4,360,480	+		DDA3937_RS19060	0.73	-0.3
4,360,480	+		DDA3937_RS19060	0.73	-1.2
4,360,480	+		DDA3937_RS19060	0.73	-0.3
4,360,480	+		DDA3937_RS19060	0.73	-0.5
4,360,481	-		DDA3937_RS19060	0.73	+0.9
4,360,481	-		DDA3937_RS19060	0.73	-2.7
4,360,481	-		DDA3937_RS19060	0.73	+0.0
4,360,481	-		DDA3937_RS19060	0.73	-1.7
4,360,481	-		DDA3937_RS19060	0.73	+1.7
4,360,481	-		DDA3937_RS19060	0.73	+1.3
4,360,481	-		DDA3937_RS19060	0.73	+1.7
4,360,575	-		DDA3937_RS19060	0.79	-0.2
4,360,604	+		DDA3937_RS19060	0.81	-1.2
4,360,878	-				-0.7
4,360,997	+				-1.1
4,360,997	+				+0.4
4,360,997	+				-1.5
4,360,998	-				+0.4
4,360,998	-				-0.1
4,360,998	-				+0.7
4,360,998	-				-0.7
4,360,998	-				+0.4
4,360,998	-				+1.5
4,361,049	+				-0.6
4,361,083	-				-0.7
4,361,088	+				-0.0
4,361,106	-				-1.3
4,361,106	-				+0.7
4,361,143	+				-1.0
4,361,186	-				-0.8
4,361,240	-				+0.2
4,361,274	+				+0.3
4,361,275	-				-0.3
4,361,275	-				+0.6
4,361,315	-		DDA3937_RS19065	0.10	+0.2
4,361,361	+		DDA3937_RS19065	0.15	-0.4
4,361,361	+		DDA3937_RS19065	0.15	-0.3
4,361,362	-		DDA3937_RS19065	0.15	+0.1
4,361,383	+		DDA3937_RS19065	0.18	-2.3
4,361,398	-		DDA3937_RS19065	0.19	+0.7
4,361,437	-		DDA3937_RS19065	0.23	-2.3
4,361,490	+		DDA3937_RS19065	0.29	-1.0
4,361,491	-		DDA3937_RS19065	0.29	-0.3
4,361,635	+		DDA3937_RS19065	0.45	-1.8
4,361,635	+		DDA3937_RS19065	0.45	-0.9
4,361,635	+		DDA3937_RS19065	0.45	-0.3
4,361,636	-		DDA3937_RS19065	0.45	-0.3
4,361,646	+		DDA3937_RS19065	0.46	-1.1
4,361,647	-		DDA3937_RS19065	0.46	+0.6
4,361,647	-		DDA3937_RS19065	0.46	-1.7
4,361,647	-		DDA3937_RS19065	0.46	-1.1
4,361,647	-		DDA3937_RS19065	0.46	-0.1
4,361,691	+		DDA3937_RS19065	0.51	-0.6
4,361,691	+		DDA3937_RS19065	0.51	+0.7
4,361,692	-		DDA3937_RS19065	0.51	+0.0
4,361,692	-		DDA3937_RS19065	0.51	-1.0
4,361,692	-		DDA3937_RS19065	0.51	-0.3
4,361,692	-		DDA3937_RS19065	0.51	+0.4
4,361,737	+		DDA3937_RS19065	0.56	-0.4
4,361,737	+		DDA3937_RS19065	0.56	-1.5
4,361,737	+		DDA3937_RS19065	0.56	-0.2
4,361,738	-		DDA3937_RS19065	0.56	+0.0
4,361,790	+		DDA3937_RS19065	0.61	+1.4
4,361,790	+		DDA3937_RS19065	0.61	+0.2
4,361,790	+		DDA3937_RS19065	0.61	+0.7
4,361,791	-		DDA3937_RS19065	0.62	+1.3
4,361,791	-		DDA3937_RS19065	0.62	+0.6
4,361,795	+		DDA3937_RS19065	0.62	+0.2
4,361,795	+		DDA3937_RS19065	0.62	-0.3
4,361,795	+		DDA3937_RS19065	0.62	-1.4
4,361,795	+		DDA3937_RS19065	0.62	-0.6
4,361,795	+		DDA3937_RS19065	0.62	-1.1
4,361,795	+		DDA3937_RS19065	0.62	+1.3
4,361,796	-		DDA3937_RS19065	0.62	-0.8
4,361,796	-		DDA3937_RS19065	0.62	-0.6
4,361,796	-		DDA3937_RS19065	0.62	-2.1
4,361,796	-		DDA3937_RS19065	0.62	-0.5
4,361,796	-		DDA3937_RS19065	0.62	-0.4
4,361,796	-		DDA3937_RS19065	0.62	-2.0