Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS17720

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
4,040,254	+				+1.3
4,040,254	+				-1.8
4,040,254	+				+0.4
4,040,255	-				-0.3
4,040,256	+				+0.6
4,040,256	+				-0.3
4,040,256	+				+0.3
4,040,257	-				-1.6
4,040,257	-				+0.4
4,040,257	-				+0.7
4,040,257	-				-0.9
4,040,372	-		DDA3937_RS17715	0.21	+0.7
4,040,433	+		DDA3937_RS17715	0.27	-0.2
4,040,502	+		DDA3937_RS17715	0.33	+1.1
4,040,503	-		DDA3937_RS17715	0.33	-0.3
4,040,503	-		DDA3937_RS17715	0.33	-1.9
4,040,503	-		DDA3937_RS17715	0.33	+0.5
4,040,503	-		DDA3937_RS17715	0.33	-0.4
4,040,648	+		DDA3937_RS17715	0.47	-0.7
4,040,683	-				-1.3
4,040,769	+		DDA3937_RS17715	0.59	+0.3
4,040,769	+		DDA3937_RS17715	0.59	-0.0
4,040,805	+		DDA3937_RS17715	0.62	-0.4
4,040,805	+				+2.1
4,040,805	+		DDA3937_RS17715	0.62	-0.0
4,040,805	+		DDA3937_RS17715	0.62	-0.8
4,040,806	-				+0.8
4,040,806	-		DDA3937_RS17715	0.62	+0.1
4,040,806	-		DDA3937_RS17715	0.62	+1.3
4,040,806	-		DDA3937_RS17715	0.62	-0.4
4,040,806	-		DDA3937_RS17715	0.62	+1.1
4,040,885	-		DDA3937_RS17715	0.70	-0.1
4,040,885	-		DDA3937_RS17715	0.70	-0.8
4,041,194	+				-0.1
4,041,194	+				-0.8
4,041,219	+				-1.3
4,041,351	+		DDA3937_RS17720	0.13	-1.1
4,041,351	+		DDA3937_RS17720	0.13	+0.2
4,041,352	-		DDA3937_RS17720	0.13	-0.7
4,041,352	-		DDA3937_RS17720	0.13	-0.3
4,041,352	-		DDA3937_RS17720	0.13	-1.1
4,041,352	-		DDA3937_RS17720	0.13	-0.0
4,041,352	-		DDA3937_RS17720	0.13	+1.0
4,041,352	-		DDA3937_RS17720	0.13	-0.2
4,041,352	-		DDA3937_RS17720	0.13	-1.4
4,041,357	+		DDA3937_RS17720	0.14	-0.9
4,041,357	+		DDA3937_RS17720	0.14	-0.8
4,041,357	+		DDA3937_RS17720	0.14	+0.6
4,041,357	+		DDA3937_RS17720	0.14	-0.9
4,041,357	+		DDA3937_RS17720	0.14	+0.7
4,041,357	+		DDA3937_RS17720	0.14	+0.2
4,041,357	+		DDA3937_RS17720	0.14	-0.3
4,041,357	+		DDA3937_RS17720	0.14	-0.7
4,041,357	+		DDA3937_RS17720	0.14	-1.0
4,041,358	-		DDA3937_RS17720	0.14	+1.4
4,041,358	-		DDA3937_RS17720	0.14	-0.3
4,041,358	-		DDA3937_RS17720	0.14	-2.1
4,041,358	-		DDA3937_RS17720	0.14	+0.5
4,041,358	-		DDA3937_RS17720	0.14	+0.3
4,041,358	-		DDA3937_RS17720	0.14	-0.4
4,041,358	-		DDA3937_RS17720	0.14	-1.5
4,041,358	-		DDA3937_RS17720	0.14	-2.8
4,041,358	-		DDA3937_RS17720	0.14	-0.3
4,041,358	-		DDA3937_RS17720	0.14	+0.6
4,041,367	+		DDA3937_RS17720	0.15	-0.2
4,041,368	-		DDA3937_RS17720	0.15	+0.4
4,041,431	+		DDA3937_RS17720	0.21	+0.4
4,041,432	-		DDA3937_RS17720	0.21	-0.9
4,041,432	-		DDA3937_RS17720	0.21	-1.3
4,041,501	+		DDA3937_RS17720	0.28	-0.0
4,041,502	-		DDA3937_RS17720	0.28	+0.3
4,041,502	-		DDA3937_RS17720	0.28	+0.5
4,041,547	-		DDA3937_RS17720	0.33	+0.0
4,041,547	-		DDA3937_RS17720	0.33	+0.6
4,041,547	-		DDA3937_RS17720	0.33	-0.7
4,041,593	-		DDA3937_RS17720	0.37	-0.3
4,041,595	-		DDA3937_RS17720	0.38	+1.8
4,041,667	+		DDA3937_RS17720	0.45	-0.3
4,041,868	+		DDA3937_RS17720	0.65	+0.1
4,041,869	-		DDA3937_RS17720	0.65	-0.9
4,041,877	+		DDA3937_RS17720	0.66	+0.1
4,041,942	+		DDA3937_RS17720	0.72	-0.1
4,041,943	-		DDA3937_RS17720	0.72	-1.4
4,041,943	-		DDA3937_RS17720	0.72	-0.0
4,041,965	-		DDA3937_RS17720	0.75	-1.4
4,041,987	+		DDA3937_RS17720	0.77	+0.1
4,041,987	+		DDA3937_RS17720	0.77	-2.8
4,041,987	+		DDA3937_RS17720	0.77	-0.1
4,041,988	-		DDA3937_RS17720	0.77	-1.2
4,041,988	-		DDA3937_RS17720	0.77	-0.0
4,042,032	+		DDA3937_RS17720	0.81	-1.9
4,042,032	+		DDA3937_RS17720	0.81	-1.5
4,042,033	-		DDA3937_RS17720	0.81	-0.0
4,042,058	-		DDA3937_RS17720	0.84	-1.1
4,042,137	-				-0.4
4,042,175	-				-0.1
4,042,312	+				-0.4
4,042,312	+				+0.1
4,042,312	+				+0.8
4,042,313	-				-0.2
4,042,313	-				+2.2
4,042,313	-				-0.0
4,042,313	-				+0.5
4,042,415	-		DDA3937_RS17725	0.15	-2.0
4,042,415	-		DDA3937_RS17725	0.15	+0.9
4,042,415	-		DDA3937_RS17725	0.15	+1.1
4,042,415	-		DDA3937_RS17725	0.15	+0.8
4,042,415	-		DDA3937_RS17725	0.15	-1.9
4,042,628	+		DDA3937_RS17725	0.35	+0.4
4,042,628	+		DDA3937_RS17725	0.35	-0.2
4,042,628	+		DDA3937_RS17725	0.35	+1.3
4,042,628	+		DDA3937_RS17725	0.35	-1.1
4,042,628	+		DDA3937_RS17725	0.35	-1.6
4,042,628	+		DDA3937_RS17725	0.35	-0.8
4,042,628	+		DDA3937_RS17725	0.35	-0.2
4,042,628	+		DDA3937_RS17725	0.35	-0.4
4,042,628	+		DDA3937_RS17725	0.35	+1.4
4,042,629	-		DDA3937_RS17725	0.35	-0.4
4,042,629	-		DDA3937_RS17725	0.35	-0.7
4,042,629	-		DDA3937_RS17725	0.35	-0.6
4,042,629	-		DDA3937_RS17725	0.35	+0.0
4,042,629	-		DDA3937_RS17725	0.35	-0.0
4,042,629	-		DDA3937_RS17725	0.35	+1.1
4,042,629	-		DDA3937_RS17725	0.35	-1.9
4,042,629	-		DDA3937_RS17725	0.35	-0.4
4,042,629	-		DDA3937_RS17725	0.35	+0.7
4,042,629	-		DDA3937_RS17725	0.35	-0.9
4,042,783	+		DDA3937_RS17725	0.49	-1.0
4,042,783	+		DDA3937_RS17725	0.49	+3.7
4,042,783	+		DDA3937_RS17725	0.49	+1.0
4,042,783	+		DDA3937_RS17725	0.49	+0.6
4,042,840	-		DDA3937_RS17725	0.54	+1.1
4,042,973	-		DDA3937_RS17725	0.66	-1.8
4,042,973	-		DDA3937_RS17725	0.66	-0.3
4,042,973	-		DDA3937_RS17725	0.66	-1.4
4,043,090	-		DDA3937_RS17725	0.76	-0.3
4,043,098	+		DDA3937_RS17725	0.77	+2.1
4,043,098	+		DDA3937_RS17725	0.77	-0.0
4,043,099	-		DDA3937_RS17725	0.77	+0.1