Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS14265

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
3,267,150	+		DDA3937_RS14260	0.55	-0.6
3,267,151	-		DDA3937_RS14260	0.55	+1.0
3,267,159	+		DDA3937_RS14260	0.55	+0.7
3,267,172	-		DDA3937_RS14260	0.56	-1.4
3,267,175	+		DDA3937_RS14260	0.56	-0.2
3,267,175	+		DDA3937_RS14260	0.56	-1.5
3,267,175	+		DDA3937_RS14260	0.56	+0.0
3,267,175	+		DDA3937_RS14260	0.56	-0.3
3,267,176	-		DDA3937_RS14260	0.56	-1.6
3,267,176	-		DDA3937_RS14260	0.56	-1.0
3,267,220	+		DDA3937_RS14260	0.59	-1.9
3,267,220	+		DDA3937_RS14260	0.59	+0.6
3,267,221	-		DDA3937_RS14260	0.59	-0.1
3,267,221	-		DDA3937_RS14260	0.59	+0.8
3,267,224	+		DDA3937_RS14260	0.60	-0.6
3,267,301	+		DDA3937_RS14260	0.64	-0.2
3,267,301	+		DDA3937_RS14260	0.64	-1.3
3,267,301	+		DDA3937_RS14260	0.64	-1.8
3,267,301	+		DDA3937_RS14260	0.64	+0.9
3,267,301	+		DDA3937_RS14260	0.64	+0.2
3,267,302	-		DDA3937_RS14260	0.64	+0.3
3,267,302	-		DDA3937_RS14260	0.64	-0.8
3,267,302	-		DDA3937_RS14260	0.64	+0.1
3,267,302	-		DDA3937_RS14260	0.64	-1.2
3,267,302	-		DDA3937_RS14260	0.64	-0.1
3,267,302	-		DDA3937_RS14260	0.64	+1.8
3,267,377	+		DDA3937_RS14260	0.69	-0.5
3,267,377	+		DDA3937_RS14260	0.69	-1.0
3,267,377	+		DDA3937_RS14260	0.69	-0.4
3,267,377	+		DDA3937_RS14260	0.69	-2.1
3,267,377	+		DDA3937_RS14260	0.69	+0.2
3,267,377	+		DDA3937_RS14260	0.69	+1.1
3,267,443	+		DDA3937_RS14260	0.73	+2.2
3,267,484	-		DDA3937_RS14260	0.76	+1.5
3,267,484	-		DDA3937_RS14260	0.76	-0.6
3,267,484	-		DDA3937_RS14260	0.76	+0.2
3,267,501	+		DDA3937_RS14260	0.77	+0.2
3,267,502	-		DDA3937_RS14260	0.77	-0.4
3,267,561	+		DDA3937_RS14260	0.81	+0.5
3,267,561	+		DDA3937_RS14260	0.81	-0.5
3,267,562	-				-0.8
3,267,562	-		DDA3937_RS14260	0.81	-0.9
3,267,562	-		DDA3937_RS14260	0.81	+0.2
3,267,562	-		DDA3937_RS14260	0.81	-2.1
3,267,562	-		DDA3937_RS14260	0.81	+0.0
3,267,562	-		DDA3937_RS14260	0.81	-2.0
3,267,562	-		DDA3937_RS14260	0.81	-1.9
3,267,565	+		DDA3937_RS14260	0.81	-0.7
3,267,565	+		DDA3937_RS14260	0.81	+0.2
3,267,565	+		DDA3937_RS14260	0.81	+0.5
3,267,565	+		DDA3937_RS14260	0.81	-0.5
3,267,566	-		DDA3937_RS14260	0.81	-0.3
3,267,566	-		DDA3937_RS14260	0.81	-1.2
3,267,566	-		DDA3937_RS14260	0.81	+0.6
3,267,566	-		DDA3937_RS14260	0.81	+0.0
3,267,566	-		DDA3937_RS14260	0.81	-0.9
3,267,566	-		DDA3937_RS14260	0.81	+0.4
3,267,566	-		DDA3937_RS14260	0.81	-3.2
3,267,633	+		DDA3937_RS14260	0.85	+0.5
3,267,633	+		DDA3937_RS14260	0.85	-1.3
3,267,633	+		DDA3937_RS14260	0.85	-1.2
3,267,633	+		DDA3937_RS14260	0.85	-0.3
3,267,634	-		DDA3937_RS14260	0.85	-1.3
3,267,634	-		DDA3937_RS14260	0.85	-1.8
3,267,634	-		DDA3937_RS14260	0.85	+4.1
3,267,634	-		DDA3937_RS14260	0.85	-1.9
3,267,634	-		DDA3937_RS14260	0.85	+0.4
3,267,739	+				-0.5
3,267,739	+				-0.6
3,267,739	+				+1.0
3,267,740	-				+0.5
3,267,740	-				+0.3
3,267,740	-				+0.4
3,267,830	-				-0.5
3,267,847	+				+0.2
3,267,847	+				+1.8
3,267,848	-				-1.4
3,267,850	+				-1.1
3,267,851	-				+2.2
3,267,853	+				-0.8
3,267,876	-				-2.1
3,267,907	-				-0.9
3,267,907	-				-1.3
3,267,907	-				-1.9
3,267,962	-				-0.9
3,268,035	-				+0.8
3,268,040	+				+0.7
3,268,040	+				-1.3
3,268,040	+				+0.1
3,268,041	-				-1.3
3,268,041	-				-0.9
3,268,041	-				+0.2
3,268,041	-				-0.9
3,268,041	-				-0.3
3,268,041	-				+0.0
3,268,041	-				-0.2
3,268,044	+				+0.4
3,268,044	+				+1.7
3,268,044	+				+0.1
3,268,044	+				-0.8
3,268,044	+				-0.9
3,268,044	+				-0.4
3,268,044	+				-0.5
3,268,045	-				-0.2
3,268,045	-				-1.6
3,268,045	-				-0.8
3,268,045	-				+0.5
3,268,103	-				+1.7
3,268,277	-		DDA3937_RS14265	0.22	-0.5
3,268,473	+		DDA3937_RS14265	0.44	+0.3
3,268,484	+		DDA3937_RS14265	0.46	-1.6
3,268,484	+		DDA3937_RS14265	0.46	-0.1
3,268,484	+		DDA3937_RS14265	0.46	+0.5
3,268,484	+		DDA3937_RS14265	0.46	-0.3
3,268,484	+		DDA3937_RS14265	0.46	-0.8
3,268,485	-		DDA3937_RS14265	0.46	+0.2
3,268,485	-		DDA3937_RS14265	0.46	-0.9
3,268,535	+		DDA3937_RS14265	0.51	-0.0
3,268,536	-		DDA3937_RS14265	0.51	-1.5
3,268,668	+		DDA3937_RS14265	0.66	+0.4
3,268,710	-		DDA3937_RS14265	0.71	+0.1
3,268,783	+		DDA3937_RS14265	0.79	-1.2
3,268,804	+		DDA3937_RS14265	0.82	-0.3
3,268,831	+		DDA3937_RS14265	0.85	+1.9
3,268,831	+		DDA3937_RS14265	0.85	-1.3
3,268,831	+		DDA3937_RS14265	0.85	+0.2
3,268,831	+		DDA3937_RS14265	0.85	-0.5
3,268,848	+		DDA3937_RS14265	0.87	+0.4
3,268,868	+		DDA3937_RS14265	0.89	+2.5
3,268,869	-		DDA3937_RS14265	0.89	-1.3
3,268,869	-		DDA3937_RS14265	0.89	-0.8
3,268,888	+				+0.5
3,268,889	-				-0.6
3,269,071	-				+1.2
3,269,071	-				-1.1
3,269,087	+				-1.7
3,269,088	-				+0.2
3,269,088	-				+0.6
3,269,088	-				+0.3
3,269,088	-				-1.4
3,269,189	+				+0.2
3,269,189	+				-0.3
3,269,189	+				-1.8
3,269,190	-				-2.3
3,269,190	-				+0.2
3,269,190	-				-0.0
3,269,190	-				-0.4
3,269,193	+				-2.6
3,269,193	+				-1.6
3,269,193	+				+0.8
3,269,193	+				+1.2
3,269,193	+				-2.8
3,269,194	-				-1.6
3,269,194	-				+1.9
3,269,194	-				+0.4
3,269,194	-				+0.2
3,269,198	+				+0.5
3,269,198	+				-0.2
3,269,235	-				-0.2
3,269,248	+				-0.8
3,269,248	+				-0.3
3,269,253	+				-1.7
3,269,253	+				-0.7
3,269,253	+				+1.0
3,269,254	-				-0.2
3,269,283	+				+0.3
3,269,334	-				-0.3
3,269,464	-				-0.5
3,269,465	+				-2.6
3,269,465	+				-0.7
3,269,466	-				-0.2
3,269,466	-				+0.3
3,269,466	-				-1.8
3,269,466	-				-1.8
3,269,502	-				+0.2
3,269,502	-				-0.8
3,269,502	-				-0.3
3,269,518	-				-1.3
3,269,518	-				+0.2
3,269,752	+		DDA3937_RS14270	0.19	-1.4
3,269,752	+		DDA3937_RS14270	0.19	-1.8
3,269,753	-		DDA3937_RS14270	0.19	-0.1
3,269,753	-		DDA3937_RS14270	0.19	-1.0
3,269,754	+		DDA3937_RS14270	0.19	+1.8
3,269,774	+		DDA3937_RS14270	0.20	+0.5
3,269,774	+		DDA3937_RS14270	0.20	+0.2
3,269,774	+		DDA3937_RS14270	0.20	-1.6
3,269,775	-		DDA3937_RS14270	0.20	+0.8
3,269,775	-		DDA3937_RS14270	0.20	+0.2
3,269,775	-		DDA3937_RS14270	0.20	-1.1
3,269,775	-		DDA3937_RS14270	0.20	-0.6
3,269,782	+		DDA3937_RS14270	0.20	-2.2
3,269,782	+		DDA3937_RS14270	0.20	+0.5
3,269,783	-		DDA3937_RS14270	0.20	+0.8
3,269,783	-		DDA3937_RS14270	0.20	-2.5
3,269,783	-		DDA3937_RS14270	0.20	-0.0
3,269,847	+		DDA3937_RS14270	0.23	-2.1
3,269,848	-		DDA3937_RS14270	0.23	-0.6
3,269,937	+		DDA3937_RS14270	0.27	-0.8
3,269,937	+		DDA3937_RS14270	0.27	+1.7
3,269,937	+		DDA3937_RS14270	0.27	-0.2
3,269,938	-		DDA3937_RS14270	0.27	-0.6
3,269,938	-		DDA3937_RS14270	0.27	-1.5
3,269,938	-		DDA3937_RS14270	0.27	+1.1
3,269,961	-		DDA3937_RS14270	0.28	+6.6
3,269,961	-		DDA3937_RS14270	0.28	+0.0