Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS07315

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
1,648,532	+		DDA3937_RS07310	0.19	-1.9
1,648,532	+		DDA3937_RS07310	0.19	-2.3
1,648,533	-		DDA3937_RS07310	0.19	-0.7
1,648,533	-		DDA3937_RS07310	0.19	-0.2
1,648,564	+		DDA3937_RS07310	0.22	+2.8
1,648,644	-		DDA3937_RS07310	0.29	+0.9
1,648,644	-		DDA3937_RS07310	0.29	+3.2
1,648,644	-		DDA3937_RS07310	0.29	-0.2
1,648,661	+		DDA3937_RS07310	0.30	-1.3
1,648,661	+		DDA3937_RS07310	0.30	-1.6
1,648,661	+		DDA3937_RS07310	0.30	-1.8
1,648,662	-		DDA3937_RS07310	0.30	-2.2
1,648,662	-		DDA3937_RS07310	0.30	-1.2
1,648,662	-		DDA3937_RS07310	0.30	-0.7
1,648,662	-		DDA3937_RS07310	0.30	-1.0
1,648,662	-		DDA3937_RS07310	0.30	-0.2
1,648,662	-		DDA3937_RS07310	0.30	-0.6
1,648,855	+		DDA3937_RS07310	0.47	-0.8
1,648,856	-		DDA3937_RS07310	0.47	-0.3
1,648,859	-		DDA3937_RS07310	0.47	+0.5
1,648,859	-		DDA3937_RS07310	0.47	+1.0
1,648,885	+		DDA3937_RS07310	0.49	-0.8
1,648,905	+		DDA3937_RS07310	0.51	+0.1
1,648,905	+		DDA3937_RS07310	0.51	-2.3
1,648,905	+		DDA3937_RS07310	0.51	-0.2
1,648,906	-		DDA3937_RS07310	0.51	-0.2
1,648,906	-		DDA3937_RS07310	0.51	+0.9
1,648,906	-		DDA3937_RS07310	0.51	-2.8
1,648,912	+		DDA3937_RS07310	0.52	+0.0
1,648,912	+				+0.8
1,648,912	+		DDA3937_RS07310	0.52	-1.9
1,648,912	+		DDA3937_RS07310	0.52	+0.5
1,648,913	-		DDA3937_RS07310	0.52	-0.5
1,648,913	-		DDA3937_RS07310	0.52	-0.7
1,648,913	-		DDA3937_RS07310	0.52	-0.8
1,648,913	-		DDA3937_RS07310	0.52	-1.8
1,648,913	-		DDA3937_RS07310	0.52	+0.2
1,648,913	-		DDA3937_RS07310	0.52	+0.2
1,648,913	-		DDA3937_RS07310	0.52	+0.9
1,648,913	-				+0.7
1,648,917	-		DDA3937_RS07310	0.52	-1.3
1,648,961	+		DDA3937_RS07310	0.56	-0.2
1,648,962	-		DDA3937_RS07310	0.56	+0.0
1,648,962	-		DDA3937_RS07310	0.56	-0.3
1,648,999	+		DDA3937_RS07310	0.59	-0.2
1,649,123	+		DDA3937_RS07310	0.69	-1.6
1,649,123	+		DDA3937_RS07310	0.69	-0.2
1,649,124	-		DDA3937_RS07310	0.70	+0.4
1,649,139	+		DDA3937_RS07310	0.71	-1.6
1,649,141	+		DDA3937_RS07310	0.71	-0.9
1,649,141	+		DDA3937_RS07310	0.71	+2.8
1,649,154	+		DDA3937_RS07310	0.72	-1.2
1,649,154	+		DDA3937_RS07310	0.72	-0.6
1,649,155	-		DDA3937_RS07310	0.72	-1.1
1,649,155	-		DDA3937_RS07310	0.72	-0.2
1,649,155	-		DDA3937_RS07310	0.72	-0.8
1,649,292	+		DDA3937_RS07310	0.84	-0.0
1,649,292	+		DDA3937_RS07310	0.84	-3.6
1,649,292	+		DDA3937_RS07310	0.84	-1.6
1,649,293	-		DDA3937_RS07310	0.84	-0.8
1,649,293	-		DDA3937_RS07310	0.84	+1.1
1,649,296	+		DDA3937_RS07310	0.84	-1.3
1,649,335	+		DDA3937_RS07310	0.87	+0.2
1,649,336	-		DDA3937_RS07310	0.88	-0.8
1,649,336	-		DDA3937_RS07310	0.88	-0.4
1,649,336	-		DDA3937_RS07310	0.88	+0.8
1,649,336	-		DDA3937_RS07310	0.88	-0.3
1,649,397	-				-0.8
1,649,501	+				+0.3
1,649,657	+		DDA3937_RS07315	0.11	+0.5
1,649,671	+		DDA3937_RS07315	0.12	+0.1
1,649,671	+				+3.2
1,649,671	+		DDA3937_RS07315	0.12	-1.1
1,649,672	-		DDA3937_RS07315	0.12	-0.4
1,649,672	-		DDA3937_RS07315	0.12	+0.8
1,649,735	-		DDA3937_RS07315	0.16	-0.1
1,649,738	+		DDA3937_RS07315	0.16	+1.9
1,649,850	+		DDA3937_RS07315	0.23	-1.3
1,649,850	+		DDA3937_RS07315	0.23	-0.6
1,649,985	+		DDA3937_RS07315	0.32	+1.1
1,649,985	+		DDA3937_RS07315	0.32	-0.5
1,649,985	+		DDA3937_RS07315	0.32	+0.8
1,649,985	+		DDA3937_RS07315	0.32	-2.2
1,649,985	+		DDA3937_RS07315	0.32	+1.2
1,649,985	+		DDA3937_RS07315	0.32	-1.3
1,649,985	+		DDA3937_RS07315	0.32	-1.0
1,649,986	-		DDA3937_RS07315	0.32	-1.5
1,649,986	-		DDA3937_RS07315	0.32	-0.6
1,649,986	-		DDA3937_RS07315	0.32	-1.2
1,650,099	+		DDA3937_RS07315	0.40	+0.2
1,650,099	+		DDA3937_RS07315	0.40	+1.1
1,650,099	+		DDA3937_RS07315	0.40	-1.6
1,650,099	+		DDA3937_RS07315	0.40	+0.4
1,650,099	+		DDA3937_RS07315	0.40	-0.3
1,650,099	+		DDA3937_RS07315	0.40	+5.0
1,650,099	+		DDA3937_RS07315	0.40	-0.8
1,650,099	+		DDA3937_RS07315	0.40	+0.2
1,650,099	+		DDA3937_RS07315	0.40	-1.1
1,650,305	+		DDA3937_RS07315	0.53	-0.0
1,650,311	+		DDA3937_RS07315	0.54	-0.2
1,650,393	+		DDA3937_RS07315	0.59	+0.5
1,650,394	-		DDA3937_RS07315	0.59	-1.1
1,650,641	+		DDA3937_RS07315	0.75	+0.4
1,650,642	-		DDA3937_RS07315	0.75	-0.1
1,650,768	+		DDA3937_RS07315	0.83	-1.1
1,650,768	+		DDA3937_RS07315	0.83	+0.7
1,650,768	+		DDA3937_RS07315	0.83	+0.5
1,650,768	+		DDA3937_RS07315	0.83	-1.8
1,650,768	+		DDA3937_RS07315	0.83	+0.1
1,650,768	+		DDA3937_RS07315	0.83	-2.3
1,650,769	-		DDA3937_RS07315	0.84	-1.6
1,650,769	-		DDA3937_RS07315	0.84	+0.2
1,650,769	-		DDA3937_RS07315	0.84	+0.1
1,650,805	-		DDA3937_RS07315	0.86	+2.5
1,650,924	+				-0.4
1,650,925	-				-2.8
1,650,925	-				+0.2
1,650,962	+				+0.3
1,650,962	+				+0.2
1,650,963	-				+1.2
1,650,963	-				-1.8
1,651,024	+				-0.2
1,651,024	+				-1.8
1,651,024	+				+0.6
1,651,024	+				+0.4
1,651,025	-				-0.3
1,651,077	+				+0.1
1,651,078	-				+0.0
1,651,100	+				-1.2
1,651,101	-				-0.1
1,651,116	+				-0.2
1,651,116	+				+0.0
1,651,116	+				+0.0
1,651,116	+				-0.7
1,651,116	+				+0.2
1,651,116	+				-1.1
1,651,116	+				-0.8
1,651,117	-				+0.9
1,651,117	-				-1.6
1,651,117	-				-0.3
1,651,117	-				+0.1
1,651,209	+		DDA3937_RS07320	0.13	-0.3
1,651,230	+		DDA3937_RS07320	0.15	-1.1
1,651,231	-		DDA3937_RS07320	0.15	-3.3
1,651,267	+		DDA3937_RS07320	0.19	-0.5
1,651,267	+		DDA3937_RS07320	0.19	+0.4
1,651,267	+		DDA3937_RS07320	0.19	-0.6
1,651,267	+		DDA3937_RS07320	0.19	+0.4
1,651,270	-		DDA3937_RS07320	0.20	+0.2
1,651,270	-		DDA3937_RS07320	0.20	-0.9
1,651,343	+		DDA3937_RS07320	0.28	-0.5
1,651,343	+		DDA3937_RS07320	0.28	+0.5
1,651,344	-		DDA3937_RS07320	0.28	+0.8
1,651,349	-		DDA3937_RS07320	0.28	-1.0
1,651,386	+		DDA3937_RS07320	0.33	-2.2
1,651,387	-		DDA3937_RS07320	0.33	-0.3
1,651,508	+		DDA3937_RS07320	0.46	+0.6
1,651,545	+		DDA3937_RS07320	0.50	-1.1
1,651,596	-		DDA3937_RS07320	0.56	+0.5
1,651,596	-		DDA3937_RS07320	0.56	-1.3
1,651,649	-		DDA3937_RS07320	0.62	-1.9
1,651,649	-		DDA3937_RS07320	0.62	-1.5
1,651,708	+		DDA3937_RS07320	0.68	-2.5
1,651,716	+		DDA3937_RS07320	0.69	-1.3
1,651,717	-		DDA3937_RS07320	0.69	-0.3
1,651,780	-		DDA3937_RS07320	0.76	+0.2
1,651,789	+		DDA3937_RS07320	0.77	+0.4
1,651,790	-		DDA3937_RS07320	0.77	+0.6
1,651,800	+		DDA3937_RS07320	0.79	+1.2
1,651,801	-		DDA3937_RS07320	0.79	+0.0
1,651,815	+		DDA3937_RS07320	0.80	+1.4
1,651,816	-		DDA3937_RS07320	0.80	-0.6
1,651,816	-		DDA3937_RS07320	0.80	-0.1
1,651,826	-		DDA3937_RS07320	0.81	-1.6
1,651,827	+		DDA3937_RS07320	0.82	-0.5
1,651,827	+		DDA3937_RS07320	0.82	-1.1
1,651,828	-				-0.8
1,651,857	+		DDA3937_RS07320	0.85	-1.6
1,651,876	+		DDA3937_RS07320	0.87	-0.7
1,651,876	+		DDA3937_RS07320	0.87	-0.8
1,651,876	+		DDA3937_RS07320	0.87	+2.0
1,651,876	+				-0.8
1,651,877	-		DDA3937_RS07320	0.87	+1.6
1,651,877	-		DDA3937_RS07320	0.87	-1.2
1,651,877	-		DDA3937_RS07320	0.87	+2.7
1,651,879	-		DDA3937_RS07320	0.87	+0.1
1,651,966	+				+0.4
1,651,967	-				-0.6
1,651,969	+				-0.2
1,651,969	+				-0.3
1,651,969	+				-0.3
1,651,969	+				+1.1
1,651,969	+				-0.6
1,651,969	+				-0.1
1,651,969	+				-0.3
1,651,970	-				-0.1
1,651,970	-				+0.8
1,651,970	-				+0.1
1,651,970	-				-0.2
1,651,971	+				+2.0
1,651,972	-				-1.2
1,651,972	-				+1.8
1,651,972	-				+0.4
1,651,991	-				-0.2
1,651,998	+				-0.1
1,651,998	+				-1.3
1,651,999	-				-0.5
1,652,001	-				+0.7
1,652,001	-				-0.2
1,652,005	+				-1.4
1,652,006	-				+0.3
1,652,010	-				-0.2
1,652,015	-				+0.5