Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS04760

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
1,058,837	+				+0.5
1,058,855	-				+0.8
1,058,855	-				-1.0
1,058,855	-				+3.6
1,058,872	-				-1.3
1,058,907	+				-0.2
1,058,907	+				+0.7
1,058,907	+				+1.2
1,058,907	+				-0.4
1,058,907	+				-0.3
1,058,908	-				+0.3
1,058,908	-				+0.5
1,058,908	-				-1.1
1,058,913	+				-0.8
1,058,970	+				-0.4
1,058,985	+		DDA3937_RS04755	0.10	-1.0
1,058,985	+		DDA3937_RS04755	0.10	-1.5
1,058,986	-		DDA3937_RS04755	0.10	+0.4
1,059,000	+		DDA3937_RS04755	0.12	+1.0
1,059,001	-		DDA3937_RS04755	0.12	-1.2
1,059,063	-		DDA3937_RS04755	0.18	+1.7
1,059,118	-		DDA3937_RS04755	0.24	-0.3
1,059,132	-		DDA3937_RS04755	0.26	+2.1
1,059,174	-		DDA3937_RS04755	0.30	+0.2
1,059,174	-		DDA3937_RS04755	0.30	-0.2
1,059,174	-		DDA3937_RS04755	0.30	-1.5
1,059,231	+		DDA3937_RS04755	0.36	+0.9
1,059,231	+		DDA3937_RS04755	0.36	-0.6
1,059,232	-		DDA3937_RS04755	0.36	-0.2
1,059,232	-		DDA3937_RS04755	0.36	+2.5
1,059,310	-		DDA3937_RS04755	0.44	-0.9
1,059,321	+		DDA3937_RS04755	0.45	+0.8
1,059,418	+		DDA3937_RS04755	0.56	-0.0
1,059,507	+		DDA3937_RS04755	0.65	-0.0
1,059,507	+		DDA3937_RS04755	0.65	-0.8
1,059,507	+		DDA3937_RS04755	0.65	+0.4
1,059,508	-		DDA3937_RS04755	0.65	-0.3
1,059,508	-		DDA3937_RS04755	0.65	-1.2
1,059,510	+		DDA3937_RS04755	0.65	+0.8
1,059,510	+		DDA3937_RS04755	0.65	-0.7
1,059,510	+		DDA3937_RS04755	0.65	-2.2
1,059,510	+		DDA3937_RS04755	0.65	+1.0
1,059,510	+		DDA3937_RS04755	0.65	-1.2
1,059,510	+		DDA3937_RS04755	0.65	-0.6
1,059,511	-		DDA3937_RS04755	0.66	-0.2
1,059,511	-		DDA3937_RS04755	0.66	-0.6
1,059,511	-		DDA3937_RS04755	0.66	+1.4
1,059,511	-		DDA3937_RS04755	0.66	-1.2
1,059,564	+		DDA3937_RS04755	0.71	-0.3
1,059,564	+		DDA3937_RS04755	0.71	+0.0
1,059,564	+		DDA3937_RS04755	0.71	+0.2
1,059,565	-		DDA3937_RS04755	0.71	-1.1
1,059,597	+		DDA3937_RS04755	0.75	+1.0
1,059,722	+		DDA3937_RS04755	0.88	-0.2
1,059,722	+		DDA3937_RS04755	0.88	-0.4
1,059,722	+		DDA3937_RS04755	0.88	-1.2
1,059,723	-		DDA3937_RS04755	0.88	-0.3
1,059,723	-		DDA3937_RS04755	0.88	-1.1
1,059,723	-		DDA3937_RS04755	0.88	-0.8
1,059,723	-		DDA3937_RS04755	0.88	-0.2
1,059,723	-		DDA3937_RS04755	0.88	-0.3
1,059,723	-		DDA3937_RS04755	0.88	-0.3
1,059,735	+		DDA3937_RS04755	0.89	-0.1
1,059,792	+				-1.5
1,059,792	+				-0.7
1,059,810	+				+0.4
1,059,811	-				+0.7
1,059,815	+				+0.6
1,059,815	+				+2.5
1,059,816	-				-0.8
1,059,816	-				-0.6
1,059,836	-				-0.2
1,059,836	-				-0.1
1,059,838	+				-0.6
1,059,839	-				+0.4
1,059,866	-				+0.7
1,060,047	+		DDA3937_RS04760	0.16	-1.8
1,060,259	+		DDA3937_RS04760	0.31	-0.6
1,060,260	-		DDA3937_RS04760	0.32	-0.3
1,060,260	-		DDA3937_RS04760	0.32	-1.7
1,060,260	-		DDA3937_RS04760	0.32	-0.9
1,060,283	-		DDA3937_RS04760	0.33	-0.9
1,060,325	+		DDA3937_RS04760	0.36	+0.2
1,060,325	+		DDA3937_RS04760	0.36	+0.6
1,060,325	+		DDA3937_RS04760	0.36	-2.5
1,060,325	+		DDA3937_RS04760	0.36	+1.9
1,060,326	-		DDA3937_RS04760	0.36	-0.6
1,060,327	+		DDA3937_RS04760	0.36	-0.3
1,060,327	+		DDA3937_RS04760	0.36	+0.4
1,060,328	-		DDA3937_RS04760	0.36	-1.0
1,060,328	-		DDA3937_RS04760	0.36	-0.7
1,060,598	+		DDA3937_RS04760	0.56	-1.2
1,060,598	+		DDA3937_RS04760	0.56	-0.5
1,060,598	+		DDA3937_RS04760	0.56	-0.8
1,060,598	+		DDA3937_RS04760	0.56	-0.8
1,060,599	-		DDA3937_RS04760	0.56	+0.6
1,060,599	-		DDA3937_RS04760	0.56	-0.1
1,060,748	+		DDA3937_RS04760	0.67	+0.4
1,060,748	+		DDA3937_RS04760	0.67	+1.1
1,060,748	+		DDA3937_RS04760	0.67	+0.6
1,060,748	+		DDA3937_RS04760	0.67	-1.2
1,060,749	-		DDA3937_RS04760	0.67	-0.4
1,060,749	-		DDA3937_RS04760	0.67	-0.7
1,060,749	-		DDA3937_RS04760	0.67	+0.3
1,060,749	-		DDA3937_RS04760	0.67	-0.2
1,060,763	+		DDA3937_RS04760	0.68	+0.7
1,060,763	+		DDA3937_RS04760	0.68	-0.1
1,060,763	+		DDA3937_RS04760	0.68	-1.2
1,060,764	-		DDA3937_RS04760	0.68	+0.1
1,060,764	-		DDA3937_RS04760	0.68	-1.2
1,060,771	+		DDA3937_RS04760	0.69	+2.5
1,060,808	+		DDA3937_RS04760	0.72	-0.5
1,060,808	+				-1.2
1,060,808	+		DDA3937_RS04760	0.72	+1.1
1,060,808	+		DDA3937_RS04760	0.72	+0.2
1,060,809	-		DDA3937_RS04760	0.72	-0.1
1,060,809	-		DDA3937_RS04760	0.72	-0.4
1,060,809	-		DDA3937_RS04760	0.72	-1.5
1,060,816	+		DDA3937_RS04760	0.72	-0.8
1,060,816	+		DDA3937_RS04760	0.72	-0.2
1,060,817	-		DDA3937_RS04760	0.72	+0.4
1,060,983	-		DDA3937_RS04760	0.84	-0.5
1,061,009	+		DDA3937_RS04760	0.86	-0.3
1,061,009	+		DDA3937_RS04760	0.86	-0.8
1,061,009	+		DDA3937_RS04760	0.86	+0.4
1,061,010	-		DDA3937_RS04760	0.86	+0.6
1,061,010	-		DDA3937_RS04760	0.86	+0.2
1,061,010	-		DDA3937_RS04760	0.86	-0.3
1,061,010	-		DDA3937_RS04760	0.86	+0.4
1,061,010	-		DDA3937_RS04760	0.86	-0.2
1,061,011	+		DDA3937_RS04760	0.87	-1.6
1,061,011	+		DDA3937_RS04760	0.87	-0.2
1,061,012	-		DDA3937_RS04760	0.87	+0.0
1,061,012	-		DDA3937_RS04760	0.87	-0.3
1,061,045	+		DDA3937_RS04760	0.89	-1.6
1,061,045	+				+0.8
1,061,045	+		DDA3937_RS04760	0.89	-1.6
1,061,045	+		DDA3937_RS04760	0.89	-0.2
1,061,045	+		DDA3937_RS04760	0.89	-2.2
1,061,045	+		DDA3937_RS04760	0.89	-1.1
1,061,046	-		DDA3937_RS04760	0.89	-0.2
1,061,046	-		DDA3937_RS04760	0.89	-0.1
1,061,047	+		DDA3937_RS04760	0.89	-0.6
1,061,047	+		DDA3937_RS04760	0.89	-0.2
1,061,047	+		DDA3937_RS04760	0.89	-1.4
1,061,047	+		DDA3937_RS04760	0.89	-0.7
1,061,047	+		DDA3937_RS04760	0.89	-0.5
1,061,047	+		DDA3937_RS04760	0.89	-0.2
1,061,048	-		DDA3937_RS04760	0.89	-0.7
1,061,048	-		DDA3937_RS04760	0.89	-1.6
1,061,048	-		DDA3937_RS04760	0.89	-0.4
1,061,117	+				-0.9
1,061,229	-				-0.4
1,061,290	+				+1.8
1,061,290	+				-0.0
1,061,291	-				-0.4
1,061,479	+		DDA3937_RS04765	0.14	-0.4
1,061,480	-		DDA3937_RS04765	0.14	-0.2
1,061,480	-		DDA3937_RS04765	0.14	+1.6
1,061,634	-		DDA3937_RS04765	0.21	-0.2
1,061,634	-		DDA3937_RS04765	0.21	-0.3
1,061,653	+		DDA3937_RS04765	0.22	-0.2
1,061,654	-		DDA3937_RS04765	0.22	-0.2
1,061,654	-		DDA3937_RS04765	0.22	+0.3
1,061,654	-		DDA3937_RS04765	0.22	-0.6
1,061,680	+		DDA3937_RS04765	0.23	-1.0
1,061,680	+		DDA3937_RS04765	0.23	-2.1
1,061,680	+		DDA3937_RS04765	0.23	-0.1
1,061,681	-		DDA3937_RS04765	0.23	-0.6
1,061,681	-		DDA3937_RS04765	0.23	-1.9
1,061,681	-		DDA3937_RS04765	0.23	+0.1
1,061,704	+		DDA3937_RS04765	0.24	-0.4
1,061,711	+		DDA3937_RS04765	0.25	-1.3
1,061,851	+		DDA3937_RS04765	0.31	-0.6
1,061,851	+		DDA3937_RS04765	0.31	-1.0
1,061,851	+		DDA3937_RS04765	0.31	-2.0
1,061,852	-		DDA3937_RS04765	0.31	-0.4
1,061,853	+		DDA3937_RS04765	0.32	+0.6
1,061,853	+		DDA3937_RS04765	0.32	+0.7
1,061,854	-		DDA3937_RS04765	0.32	-0.8
1,061,952	+		DDA3937_RS04765	0.36	-0.6
1,062,048	+		DDA3937_RS04765	0.41	+0.3
1,062,048	+		DDA3937_RS04765	0.41	+2.0
1,062,077	-		DDA3937_RS04765	0.42	-0.5
1,062,083	+		DDA3937_RS04765	0.43	+0.0
1,062,092	+		DDA3937_RS04765	0.43	-2.5
1,062,139	+		DDA3937_RS04765	0.45	+0.5
1,062,139	+		DDA3937_RS04765	0.45	-0.8
1,062,139	+		DDA3937_RS04765	0.45	+1.4
1,062,140	-		DDA3937_RS04765	0.45	-0.2
1,062,140	-		DDA3937_RS04765	0.45	-0.1