Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS18375

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
4,197,686	-				-1.0
4,197,689	-				-0.5
4,197,689	-				+0.6
4,197,689	-				-0.9
4,197,689	-				+0.1
4,197,689	-				-1.8
4,197,689	-				-0.7
4,197,689	-				-0.4
4,197,731	+				+0.1
4,197,731	+				-0.1
4,197,731	+				+1.0
4,197,731	+				-1.2
4,197,732	-				+2.1
4,197,732	-				+0.2
4,197,732	-				+0.8
4,197,763	+				-0.3
4,197,764	-				+0.1
4,197,764	-				+0.3
4,197,764	-				+0.3
4,197,764	-				-0.3
4,197,799	+				+1.0
4,197,840	-				-1.1
4,197,850	+				-0.4
4,197,851	-				-0.2
4,197,860	+				-0.4
4,197,860	+				-0.3
4,197,861	-				-0.5
4,197,881	-				-0.6
4,197,985	+				-0.8
4,197,985	+				+1.2
4,197,986	-				-0.8
4,198,024	+				+1.0
4,198,024	+				-0.4
4,198,024	+				+3.0
4,198,024	+				-0.3
4,198,024	+				-0.3
4,198,024	+				-0.6
4,198,024	+				-0.7
4,198,024	+				+1.1
4,198,024	+				-1.8
4,198,024	+				-0.1
4,198,024	+				+0.7
4,198,024	+				+0.3
4,198,024	+				+0.3
4,198,024	+				-1.1
4,198,024	+				+0.1
4,198,024	+				-0.1
4,198,024	+				+0.2
4,198,024	+				+0.2
4,198,024	+				-0.8
4,198,024	+				+0.3
4,198,025	-				-0.0
4,198,025	-				+0.1
4,198,025	-				+0.5
4,198,025	-				+1.6
4,198,025	-				+0.1
4,198,025	-				+1.9
4,198,025	-				-2.1
4,198,025	-				-0.6
4,198,025	-				+3.8
4,198,025	-				-0.0
4,198,025	-				-1.1
4,198,025	-				-1.5
4,198,025	-				-0.3
4,198,025	-				+1.0
4,198,135	+		DDA3937_RS18375	0.19	-0.8
4,198,135	+		DDA3937_RS18375	0.19	+0.3
4,198,157	+		DDA3937_RS18375	0.23	-2.6
4,198,157	+		DDA3937_RS18375	0.23	+0.2
4,198,158	-		DDA3937_RS18375	0.23	-0.8
4,198,158	-		DDA3937_RS18375	0.23	-0.1
4,198,197	-		DDA3937_RS18375	0.30	-1.3
4,198,197	-		DDA3937_RS18375	0.30	+0.1
4,198,198	+		DDA3937_RS18375	0.30	-2.1
4,198,198	+		DDA3937_RS18375	0.30	-2.1
4,198,198	+		DDA3937_RS18375	0.30	-0.7
4,198,198	+		DDA3937_RS18375	0.30	+0.1
4,198,198	+		DDA3937_RS18375	0.30	+0.3
4,198,198	+		DDA3937_RS18375	0.30	+1.3
4,198,199	-		DDA3937_RS18375	0.30	-1.5
4,198,199	-		DDA3937_RS18375	0.30	+0.8
4,198,199	-		DDA3937_RS18375	0.30	-2.6
4,198,231	+		DDA3937_RS18375	0.36	-0.9
4,198,231	+		DDA3937_RS18375	0.36	+1.3
4,198,231	+		DDA3937_RS18375	0.36	-0.6
4,198,232	-		DDA3937_RS18375	0.36	+0.3
4,198,232	-		DDA3937_RS18375	0.36	-0.7
4,198,232	-		DDA3937_RS18375	0.36	-1.7
4,198,238	+		DDA3937_RS18375	0.37	-0.6
4,198,239	-		DDA3937_RS18375	0.37	+0.6
4,198,239	-		DDA3937_RS18375	0.37	-0.4
4,198,239	-		DDA3937_RS18375	0.37	-1.5
4,198,326	+		DDA3937_RS18375	0.53	-1.3
4,198,327	-		DDA3937_RS18375	0.53	-0.4
4,198,422	+		DDA3937_RS18375	0.69	+1.3
4,198,422	+		DDA3937_RS18375	0.69	-0.5
4,198,488	-		DDA3937_RS18375	0.81	-0.7
4,198,499	-		DDA3937_RS18375	0.83	-1.1
4,198,520	+		DDA3937_RS18375	0.86	+1.3
4,198,520	+		DDA3937_RS18375	0.86	+0.3
4,198,520	+		DDA3937_RS18375	0.86	-0.7
4,198,520	+		DDA3937_RS18375	0.86	-2.1
4,198,521	-		DDA3937_RS18375	0.87	+0.1
4,198,553	+				+0.0
4,198,553	+				-0.0
4,198,611	-				-1.3
4,198,636	+				+0.2
4,198,694	-				-0.7
4,198,694	-				+0.4
4,198,694	-				-1.1
4,198,749	-				-1.0
4,198,749	-				+0.5
4,198,749	-				-1.2
4,198,749	-				+0.2
4,198,762	+				+0.4
4,198,763	-				+0.4
4,198,797	+				-0.1
4,198,798	-				+0.3
4,198,804	+				-1.9
4,198,804	+				-1.9
4,198,804	+				-0.8
4,198,805	-				+0.2
4,198,805	-				-1.2
4,198,805	-				-0.9
4,198,879	+		DDA3937_RS18380	0.14	+0.1
4,198,879	+		DDA3937_RS18380	0.14	+0.6
4,198,879	+		DDA3937_RS18380	0.14	+0.3
4,198,880	-		DDA3937_RS18380	0.14	-0.4
4,198,880	-		DDA3937_RS18380	0.14	-1.0
4,198,892	-		DDA3937_RS18380	0.15	+0.1
4,198,892	-		DDA3937_RS18380	0.15	-1.3
4,198,892	-		DDA3937_RS18380	0.15	-1.2
4,198,892	-		DDA3937_RS18380	0.15	+0.6
4,198,948	+		DDA3937_RS18380	0.19	+0.1
4,198,993	+		DDA3937_RS18380	0.23	-3.3
4,198,993	+		DDA3937_RS18380	0.23	+0.1
4,198,993	+		DDA3937_RS18380	0.23	+0.6
4,198,993	+		DDA3937_RS18380	0.23	-1.5
4,198,993	+		DDA3937_RS18380	0.23	-1.7
4,198,994	-		DDA3937_RS18380	0.23	-0.1
4,199,084	+		DDA3937_RS18380	0.30	-0.2
4,199,084	+		DDA3937_RS18380	0.30	-1.1
4,199,126	+		DDA3937_RS18380	0.33	+2.3
4,199,126	+		DDA3937_RS18380	0.33	-0.7
4,199,126	+		DDA3937_RS18380	0.33	-0.5
4,199,126	+		DDA3937_RS18380	0.33	-2.9
4,199,127	-		DDA3937_RS18380	0.33	-0.0
4,199,209	+		DDA3937_RS18380	0.39	-2.6
4,199,210	-		DDA3937_RS18380	0.39	-2.9
4,199,210	-		DDA3937_RS18380	0.39	-0.7
4,199,210	-		DDA3937_RS18380	0.39	-1.7
4,199,291	+		DDA3937_RS18380	0.45	+1.5
4,199,291	+		DDA3937_RS18380	0.45	+1.0
4,199,292	-		DDA3937_RS18380	0.45	+0.0
4,199,301	+		DDA3937_RS18380	0.46	+0.0
4,199,301	+		DDA3937_RS18380	0.46	-0.1
4,199,301	+		DDA3937_RS18380	0.46	-0.2
4,199,302	-		DDA3937_RS18380	0.46	-2.4
4,199,302	-		DDA3937_RS18380	0.46	+0.6
4,199,392	+		DDA3937_RS18380	0.53	-1.0
4,199,393	-		DDA3937_RS18380	0.53	+0.2
4,199,414	+		DDA3937_RS18380	0.55	-0.2
4,199,477	+		DDA3937_RS18380	0.59	+0.0
4,199,477	+		DDA3937_RS18380	0.59	-1.2
4,199,478	-		DDA3937_RS18380	0.60	+0.6
4,199,478	-		DDA3937_RS18380	0.60	-1.5
4,199,478	-		DDA3937_RS18380	0.60	-0.2
4,199,478	-		DDA3937_RS18380	0.60	+0.5