Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS09835

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
2,218,172	+		DDA3937_RS09825	0.42	-0.3
2,218,185	+		DDA3937_RS09825	0.46	+0.6
2,218,186	-		DDA3937_RS09825	0.46	-0.7
2,218,215	-		DDA3937_RS09825	0.55	+0.3
2,218,241	+		DDA3937_RS09825	0.63	-0.4
2,218,249	-		DDA3937_RS09825	0.65	+0.8
2,218,269	+		DDA3937_RS09825	0.71	-1.1
2,218,269	+		DDA3937_RS09825	0.71	+1.6
2,218,269	+		DDA3937_RS09825	0.71	-0.4
2,218,269	+		DDA3937_RS09825	0.71	-2.6
2,218,269	+		DDA3937_RS09825	0.71	-0.5
2,218,269	+		DDA3937_RS09825	0.71	+0.7
2,218,269	+		DDA3937_RS09825	0.71	+3.5
2,218,270	-		DDA3937_RS09825	0.71	-0.6
2,218,270	-		DDA3937_RS09825	0.71	-0.5
2,218,270	-		DDA3937_RS09825	0.71	-1.5
2,218,270	-		DDA3937_RS09825	0.71	+0.3
2,218,270	-		DDA3937_RS09825	0.71	+0.2
2,218,343	+				+0.7
2,218,344	-				-1.2
2,218,365	+				+0.2
2,218,436	+				-1.2
2,218,563	+		DDA3937_RS09830	0.35	-0.6
2,218,575	+		DDA3937_RS09830	0.38	+0.2
2,218,576	-		DDA3937_RS09830	0.39	-2.0
2,218,613	+		DDA3937_RS09830	0.49	+0.7
2,218,613	+				-0.7
2,218,613	+		DDA3937_RS09830	0.49	-0.2
2,218,613	+		DDA3937_RS09830	0.49	-0.3
2,218,613	+		DDA3937_RS09830	0.49	-1.2
2,218,614	-		DDA3937_RS09830	0.49	+0.6
2,218,614	-		DDA3937_RS09830	0.49	-2.0
2,218,614	-		DDA3937_RS09830	0.49	+0.3
2,218,614	-		DDA3937_RS09830	0.49	-1.5
2,218,616	+		DDA3937_RS09830	0.49	+0.1
2,218,617	-		DDA3937_RS09830	0.50	+0.8
2,218,617	-		DDA3937_RS09830	0.50	+0.7
2,218,617	-		DDA3937_RS09830	0.50	-0.7
2,218,800	+				-0.0
2,218,800	+				-0.4
2,218,800	+				+0.3
2,218,800	+				+0.1
2,218,800	+				+1.7
2,218,801	-				-0.0
2,218,801	-				+1.8
2,218,801	-				-0.6
2,218,801	-				+0.3
2,218,832	-				+1.1
2,218,832	-				-0.2
2,218,847	+				-1.4
2,218,847	+				-0.6
2,218,848	-				-1.5
2,218,848	-				+0.3
2,218,848	-				+0.4
2,218,848	-				-0.7
2,218,848	-				-0.5
2,218,848	-				-0.2
2,218,859	+				-0.2
2,218,859	+				+0.5
2,218,860	-				+0.1
2,218,860	-				-0.2
2,218,880	+				-1.2
2,218,886	+				-0.6
2,218,887	-				+0.5
2,218,911	+				+1.1
2,218,912	-				-1.2
2,218,912	-				-0.5
2,218,962	+				+1.4
2,218,962	+				-0.7
2,218,963	-				-1.2
2,218,963	-				-0.0
2,218,970	+				-0.7
2,218,970	+				+0.3
2,218,970	+				+0.4
2,218,970	+				-1.0
2,218,970	+				+0.5
2,218,970	+				+0.0
2,218,971	-				+0.5
2,218,971	-				-0.7
2,219,120	-				-0.7
2,219,176	+				-0.4
2,219,176	+				+0.0
2,219,177	-				+1.1
2,219,177	-				+1.5
2,219,177	-				-1.5
2,219,177	-				-0.5
2,219,200	+				+0.4
2,219,201	-				+1.2
2,219,317	-				-0.7
2,219,317	-				-0.7
2,219,317	-				-1.2
2,219,333	-		DDA3937_RS09835	0.10	-0.0
2,219,391	-		DDA3937_RS09835	0.13	+0.1
2,219,476	-		DDA3937_RS09835	0.16	+0.8
2,219,476	-		DDA3937_RS09835	0.16	-0.2
2,219,476	-		DDA3937_RS09835	0.16	+1.1
2,219,650	+		DDA3937_RS09835	0.24	-1.1
2,219,651	-		DDA3937_RS09835	0.24	+0.1
2,219,837	+		DDA3937_RS09835	0.32	-0.2
2,219,886	+		DDA3937_RS09835	0.34	+0.2
2,219,886	+		DDA3937_RS09835	0.34	-2.3
2,219,886	+		DDA3937_RS09835	0.34	+0.3
2,219,887	-		DDA3937_RS09835	0.34	+0.4
2,220,193	+		DDA3937_RS09835	0.48	-0.5
2,220,193	+		DDA3937_RS09835	0.48	-0.4
2,220,194	-		DDA3937_RS09835	0.48	-1.2
2,220,194	-		DDA3937_RS09835	0.48	+0.4
2,220,203	+		DDA3937_RS09835	0.48	+2.0
2,220,387	-		DDA3937_RS09835	0.56	+0.7
2,220,505	-		DDA3937_RS09835	0.61	-0.0
2,220,505	-		DDA3937_RS09835	0.61	-0.1
2,220,586	+		DDA3937_RS09835	0.65	+0.1
2,220,698	+		DDA3937_RS09835	0.70	-0.2
2,220,698	+		DDA3937_RS09835	0.70	-0.4
2,220,698	+		DDA3937_RS09835	0.70	-1.0
2,220,698	+		DDA3937_RS09835	0.70	-0.8
2,220,698	+		DDA3937_RS09835	0.70	-1.2
2,220,698	+		DDA3937_RS09835	0.70	-2.0
2,220,698	+		DDA3937_RS09835	0.70	-2.6
2,220,699	-		DDA3937_RS09835	0.70	+1.0
2,220,699	-		DDA3937_RS09835	0.70	-0.5
2,220,699	-		DDA3937_RS09835	0.70	-2.7
2,220,699	-		DDA3937_RS09835	0.70	-2.2
2,220,699	-		DDA3937_RS09835	0.70	+0.3
2,220,699	-		DDA3937_RS09835	0.70	+0.2
2,220,699	-		DDA3937_RS09835	0.70	-1.5
2,220,699	-		DDA3937_RS09835	0.70	+1.2
2,220,699	-		DDA3937_RS09835	0.70	-0.6
2,220,699	-		DDA3937_RS09835	0.70	+0.5
2,220,699	-		DDA3937_RS09835	0.70	+1.1
2,220,699	-		DDA3937_RS09835	0.70	-0.5
2,220,699	-		DDA3937_RS09835	0.70	-1.0
2,220,756	-		DDA3937_RS09835	0.72	-1.5
2,220,756	-		DDA3937_RS09835	0.72	+0.0
2,220,756	-		DDA3937_RS09835	0.72	+0.7
2,220,760	+		DDA3937_RS09835	0.72	-1.1
2,220,774	+		DDA3937_RS09835	0.73	+1.4
2,220,774	+		DDA3937_RS09835	0.73	-0.6
2,220,775	-		DDA3937_RS09835	0.73	-0.4
2,220,837	+		DDA3937_RS09835	0.76	+0.1
2,220,838	-		DDA3937_RS09835	0.76	+0.4
2,220,864	+				+1.8
2,220,866	+		DDA3937_RS09835	0.77	+1.5
2,220,867	-		DDA3937_RS09835	0.77	+0.3
2,220,867	-		DDA3937_RS09835	0.77	-0.9
2,220,867	-		DDA3937_RS09835	0.77	+1.4
2,220,867	-		DDA3937_RS09835	0.77	+0.3
2,220,901	+		DDA3937_RS09835	0.78	-1.5
2,220,901	+		DDA3937_RS09835	0.78	-1.4
2,220,901	+		DDA3937_RS09835	0.78	-0.7
2,220,901	+		DDA3937_RS09835	0.78	-1.0
2,220,901	+		DDA3937_RS09835	0.78	-2.2
2,220,901	+		DDA3937_RS09835	0.78	-0.7
2,220,901	+		DDA3937_RS09835	0.78	+1.3
2,220,901	+		DDA3937_RS09835	0.78	+0.5
2,220,901	+		DDA3937_RS09835	0.78	-0.3
2,220,902	-		DDA3937_RS09835	0.78	-1.0
2,220,902	-		DDA3937_RS09835	0.78	-0.3
2,220,902	-		DDA3937_RS09835	0.78	-0.6
2,220,902	-		DDA3937_RS09835	0.78	-0.2
2,220,903	+		DDA3937_RS09835	0.79	-0.4
2,220,903	+		DDA3937_RS09835	0.79	-0.5
2,220,903	+		DDA3937_RS09835	0.79	+1.1
2,220,903	+		DDA3937_RS09835	0.79	-0.6
2,220,903	+		DDA3937_RS09835	0.79	-1.5
2,220,903	+		DDA3937_RS09835	0.79	-0.8
2,220,904	-		DDA3937_RS09835	0.79	+0.4
2,220,904	-		DDA3937_RS09835	0.79	-2.2
2,220,904	-		DDA3937_RS09835	0.79	+3.1
2,220,904	-		DDA3937_RS09835	0.79	+0.6
2,220,904	-		DDA3937_RS09835	0.79	-3.0
2,220,941	-		DDA3937_RS09835	0.80	-0.2
2,220,946	+		DDA3937_RS09835	0.80	+0.7
2,220,947	-		DDA3937_RS09835	0.80	+1.2
2,221,027	-		DDA3937_RS09835	0.84	+1.4
2,221,027	-		DDA3937_RS09835	0.84	-0.8
2,221,063	+		DDA3937_RS09835	0.85	+0.3
2,221,063	+		DDA3937_RS09835	0.85	+1.4
2,221,063	+		DDA3937_RS09835	0.85	-1.2
2,221,063	+		DDA3937_RS09835	0.85	+0.7
2,221,063	+		DDA3937_RS09835	0.85	-0.8
2,221,063	+		DDA3937_RS09835	0.85	-0.0
2,221,063	+		DDA3937_RS09835	0.85	-2.4
2,221,063	+		DDA3937_RS09835	0.85	-0.6
2,221,063	+		DDA3937_RS09835	0.85	-2.2
2,221,063	+		DDA3937_RS09835	0.85	-2.6
2,221,063	+		DDA3937_RS09835	0.85	-0.6
2,221,063	+		DDA3937_RS09835	0.85	-1.5
2,221,063	+		DDA3937_RS09835	0.85	+0.3
2,221,063	+		DDA3937_RS09835	0.85	+0.2
2,221,063	+		DDA3937_RS09835	0.85	-1.0
2,221,063	+		DDA3937_RS09835	0.85	+0.2
2,221,063	+		DDA3937_RS09835	0.85	+0.2
2,221,063	+		DDA3937_RS09835	0.85	+4.3
2,221,064	-		DDA3937_RS09835	0.86	+1.0
2,221,064	-		DDA3937_RS09835	0.86	+0.3
2,221,064	-		DDA3937_RS09835	0.86	+0.2
2,221,064	-		DDA3937_RS09835	0.86	+0.8
2,221,064	-		DDA3937_RS09835	0.86	+1.3
2,221,064	-		DDA3937_RS09835	0.86	-1.5
2,221,064	-		DDA3937_RS09835	0.86	-2.2
2,221,064	-		DDA3937_RS09835	0.86	+0.4
2,221,064	-		DDA3937_RS09835	0.86	-1.6
2,221,068	+		DDA3937_RS09835	0.86	-0.2
2,221,068	+		DDA3937_RS09835	0.86	-0.2
2,221,069	-		DDA3937_RS09835	0.86	+0.6
2,221,069	-		DDA3937_RS09835	0.86	+0.3
2,221,271	-				-2.5
2,221,345	-				+0.3
2,221,345	-				-0.9
2,221,394	+				-0.2
2,221,397	+				-1.0
2,221,397	+				+1.5
2,221,400	+				-3.5
2,221,400	+				-1.6
2,221,412	+				-0.3