Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS15150

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
3,476,080	+		DDA3937_RS15145	0.69	+0.1
3,476,080	+		DDA3937_RS15145	0.69	-2.2
3,476,080	+		DDA3937_RS15145	0.69	+0.8
3,476,080	+		DDA3937_RS15145	0.69	+0.9
3,476,080	+		DDA3937_RS15145	0.69	+0.1
3,476,080	+		DDA3937_RS15145	0.69	+0.9
3,476,080	+		DDA3937_RS15145	0.69	-1.1
3,476,080	+		DDA3937_RS15145	0.69	+0.0
3,476,081	-		DDA3937_RS15145	0.69	+0.8
3,476,081	-		DDA3937_RS15145	0.69	+0.9
3,476,081	-		DDA3937_RS15145	0.69	+1.4
3,476,081	-		DDA3937_RS15145	0.69	-0.2
3,476,081	-		DDA3937_RS15145	0.69	-0.6
3,476,081	-		DDA3937_RS15145	0.69	-2.2
3,476,081	-		DDA3937_RS15145	0.69	+1.0
3,476,174	+		DDA3937_RS15145	0.73	+0.8
3,476,174	+		DDA3937_RS15145	0.73	+1.0
3,476,174	+		DDA3937_RS15145	0.73	+0.1
3,476,174	+		DDA3937_RS15145	0.73	-1.2
3,476,174	+		DDA3937_RS15145	0.73	+0.2
3,476,174	+		DDA3937_RS15145	0.73	+0.0
3,476,175	-		DDA3937_RS15145	0.73	+0.8
3,476,175	-		DDA3937_RS15145	0.73	-0.2
3,476,175	-		DDA3937_RS15145	0.73	+0.6
3,476,175	-		DDA3937_RS15145	0.73	+0.1
3,476,175	-		DDA3937_RS15145	0.73	+0.1
3,476,175	-		DDA3937_RS15145	0.73	+0.5
3,476,175	-		DDA3937_RS15145	0.73	-0.9
3,476,176	+		DDA3937_RS15145	0.73	-0.4
3,476,176	+		DDA3937_RS15145	0.73	-1.4
3,476,176	+		DDA3937_RS15145	0.73	-0.7
3,476,176	+		DDA3937_RS15145	0.73	-0.5
3,476,176	+		DDA3937_RS15145	0.73	+1.0
3,476,176	+		DDA3937_RS15145	0.73	+0.5
3,476,176	+		DDA3937_RS15145	0.73	-1.5
3,476,176	+		DDA3937_RS15145	0.73	+1.0
3,476,176	+		DDA3937_RS15145	0.73	+2.1
3,476,177	-		DDA3937_RS15145	0.73	+0.5
3,476,177	-		DDA3937_RS15145	0.73	-0.9
3,476,177	-		DDA3937_RS15145	0.73	-0.0
3,476,177	-		DDA3937_RS15145	0.73	-1.8
3,476,177	-		DDA3937_RS15145	0.73	-0.4
3,476,177	-		DDA3937_RS15145	0.73	-0.3
3,476,177	-				+1.8
3,476,177	-		DDA3937_RS15145	0.73	+0.2
3,476,177	-		DDA3937_RS15145	0.73	+2.2
3,476,177	-		DDA3937_RS15145	0.73	-0.8
3,476,403	+		DDA3937_RS15145	0.84	-0.5
3,476,403	+		DDA3937_RS15145	0.84	-0.0
3,476,404	-		DDA3937_RS15145	0.84	+0.8
3,476,404	-		DDA3937_RS15145	0.84	+1.0
3,476,404	-		DDA3937_RS15145	0.84	+0.5
3,476,404	-		DDA3937_RS15145	0.84	-0.1
3,476,404	-		DDA3937_RS15145	0.84	+2.8
3,476,452	-		DDA3937_RS15145	0.86	-0.0
3,476,623	+				+0.0
3,476,623	+				-0.2
3,476,623	+				-2.2
3,476,623	+				+5.0
3,476,624	-				-2.5
3,476,624	-				+0.4
3,476,624	-				-0.2
3,476,624	-				+0.5
3,476,624	-				+0.2
3,476,624	-				+0.5
3,476,624	-				+1.2
3,476,624	-				+0.1
3,476,632	+				+0.5
3,476,736	+				-1.1
3,476,736	+				+1.2
3,476,736	+				+0.7
3,476,736	+				-1.2
3,476,737	-				-0.1
3,476,737	-				+0.2
3,476,848	+				-0.2
3,476,848	+				-0.3
3,476,848	+				+0.8
3,476,848	+				+2.7
3,476,848	+				-1.0
3,476,848	+				+0.4
3,476,848	+				+0.4
3,476,848	+				-0.7
3,476,848	+				-2.1
3,476,848	+				+0.4
3,476,848	+				+0.5
3,476,848	+				+0.3
3,476,848	+				+1.2
3,476,848	+				+0.2
3,476,848	+				+0.2
3,476,848	+				+2.0
3,476,848	+				-0.4
3,476,848	+				+2.1
3,476,848	+				+1.5
3,476,848	+				-0.4
3,476,848	+				-0.3
3,476,848	+				+0.7
3,476,848	+				-0.5
3,476,848	+				-0.3
3,476,848	+				+0.2
3,476,848	+				-1.0
3,476,848	+				+0.9
3,476,848	+				-0.8
3,476,848	+				+0.6
3,476,849	-				+0.0
3,476,849	-				-0.2
3,476,849	-				+0.2
3,476,849	-				-1.8
3,476,849	-				-0.2
3,476,849	-				-0.4
3,476,849	-				-1.1
3,476,849	-				-0.5
3,476,849	-				-1.2
3,476,849	-				+0.1
3,476,849	-				+2.5
3,476,849	-				+1.0
3,476,849	-				-1.5
3,476,849	-				-1.8
3,476,849	-				+0.4
3,476,849	-				+0.7
3,476,849	-				-1.4
3,476,849	-				-1.7
3,476,849	-				-0.6
3,476,849	-				-1.4
3,476,849	-				+2.1
3,476,849	-				-0.4
3,476,849	-				+2.7
3,476,849	-				+0.3
3,476,849	-				-0.9
3,476,849	-				-0.8
3,476,849	-				-1.3
3,476,849	-				+0.7
3,476,849	-				-0.9
3,476,849	-				-1.2
3,476,849	-				+2.2
3,476,849	-				+0.3
3,476,849	-				+0.7
3,476,850	-				-1.3
3,476,867	+				+0.2
3,476,868	-				+1.9
3,476,868	-				+0.5
3,476,870	+				-1.3
3,476,870	+				+0.3
3,476,870	+				-0.3
3,476,870	+				+1.8
3,476,871	-				-0.1
3,476,871	-				-1.1
3,476,871	-				-1.2
3,476,871	-				-0.0
3,476,881	+				-0.5
3,476,881	+				-1.0
3,476,882	-				+0.6
3,476,882	-				-1.6
3,476,882	-				+1.7
3,476,882	-				-2.0
3,476,882	-				+0.2
3,476,882	-				+0.1
3,476,882	-				+1.6
3,476,882	-				-1.5
3,476,905	+				+0.2
3,476,906	-				-1.0
3,476,906	-				-1.3
3,476,906	-				+1.8
3,476,937	+				-1.9
3,476,938	-				-0.8
3,476,940	+				-1.1
3,476,940	+				-1.2
3,476,940	+				-0.9
3,476,940	+				-0.6
3,476,940	+				-0.1
3,476,941	-				-1.6
3,476,944	+				-1.9
3,476,945	-				+0.4
3,476,950	+				+1.6
3,476,951	-				-1.8
3,476,951	-				+1.8
3,476,960	+				-2.6
3,476,961	-				-0.6
3,476,961	-				+2.0
3,476,996	+				-0.9
3,476,996	+				-1.6
3,476,996	+				-0.5
3,476,997	-				-0.8
3,477,000	+				-1.1
3,477,001	-				-2.6
3,477,001	-				-0.8
3,477,102	-				+3.2
3,477,102	-				+1.2
3,477,102	-				-1.3
3,477,102	-				-0.8
3,477,102	-				-0.8
3,477,205	-		DDA3937_RS15150	0.11	-0.6
3,477,260	+		DDA3937_RS15150	0.14	-1.0
3,477,260	+		DDA3937_RS15150	0.14	-2.3
3,477,260	+		DDA3937_RS15150	0.14	-1.1
3,477,260	+		DDA3937_RS15150	0.14	+0.7
3,477,380	-		DDA3937_RS15150	0.19	-1.8
3,477,437	+		DDA3937_RS15150	0.22	-1.9
3,477,437	+		DDA3937_RS15150	0.22	+0.2
3,477,438	-		DDA3937_RS15150	0.22	-1.7
3,477,438	-				-1.3
3,477,438	-		DDA3937_RS15150	0.22	-1.1
3,477,443	+		DDA3937_RS15150	0.22	-0.1
3,477,444	-		DDA3937_RS15150	0.23	-2.1
3,477,482	+		DDA3937_RS15150	0.24	-1.1
3,477,644	+		DDA3937_RS15150	0.32	-1.3
3,477,674	+		DDA3937_RS15150	0.34	+0.2
3,477,767	+		DDA3937_RS15150	0.38	-0.1
3,477,812	-		DDA3937_RS15150	0.40	-2.8
3,477,830	+		DDA3937_RS15150	0.41	+1.8
3,477,830	+		DDA3937_RS15150	0.41	-1.6
3,477,830	+		DDA3937_RS15150	0.41	-1.6
3,477,993	+		DDA3937_RS15150	0.49	+0.0
3,477,994	-		DDA3937_RS15150	0.49	-0.6
3,478,001	+		DDA3937_RS15150	0.49	-0.8
3,478,015	+		DDA3937_RS15150	0.50	-1.8
3,478,015	+		DDA3937_RS15150	0.50	+0.1
3,478,016	-		DDA3937_RS15150	0.50	-2.8
3,478,087	+		DDA3937_RS15150	0.54	-0.8
3,478,088	-		DDA3937_RS15150	0.54	+1.2
3,478,091	+				-0.3
3,478,092	-		DDA3937_RS15150	0.54	-0.8
3,478,325	+		DDA3937_RS15150	0.65	+0.6
3,478,325	+		DDA3937_RS15150	0.65	-1.9
3,478,373	+		DDA3937_RS15150	0.67	-0.8
3,478,373	+		DDA3937_RS15150	0.67	-0.2
3,478,373	+		DDA3937_RS15150	0.67	+0.1
3,478,373	+		DDA3937_RS15150	0.67	-0.8
3,478,373	+		DDA3937_RS15150	0.67	-1.0
3,478,373	+		DDA3937_RS15150	0.67	-2.2
3,478,374	-		DDA3937_RS15150	0.67	-1.1
3,478,374	-		DDA3937_RS15150	0.67	-2.1
3,478,376	-		DDA3937_RS15150	0.68	-0.8
3,478,383	-		DDA3937_RS15150	0.68	-1.4
3,478,608	+		DDA3937_RS15150	0.79	+0.7
3,478,654	-		DDA3937_RS15150	0.81	-0.0
3,478,723	+		DDA3937_RS15150	0.84	+0.5
3,478,757	+		DDA3937_RS15150	0.86	+0.2
3,478,757	+		DDA3937_RS15150	0.86	-2.1
3,478,757	+		DDA3937_RS15150	0.86	-0.0
3,478,758	-		DDA3937_RS15150	0.86	-2.0
3,478,758	-		DDA3937_RS15150	0.86	-2.2
3,478,984	-				+0.2
3,479,003	+				-1.8
3,479,003	+				-2.5
3,479,003	+				+3.3
3,479,003	+				-0.9
3,479,003	+				-1.2
3,479,003	+				+0.8
3,479,003	+				+0.5
3,479,004	-				+1.2
3,479,004	-				-2.1
3,479,004	-				-2.1
3,479,004	-				-0.9
3,479,004	-				+0.2
3,479,004	-				-0.8
3,479,004	-				-0.3
3,479,004	-				-0.8
3,479,004	-				-1.3
3,479,004	-				-0.1
3,479,004	-				-1.6
3,479,004	-				-1.3
3,479,004	-				-1.2
3,479,004	-				+0.8
3,479,004	-				-1.5
3,479,009	+				-0.3
3,479,009	+				-1.8
3,479,009	+				+0.4
3,479,010	-				-0.8
3,479,010	-				-1.2
3,479,010	-				-1.9
3,479,010	-				-0.6
3,479,011	+				-2.2
3,479,012	-				-0.2
3,479,012	-				+0.1
3,479,012	-				-0.0
3,479,012	-				-1.5
3,479,126	+				-1.3
3,479,127	-				+0.4
3,479,300	+		DDA3937_RS15155	0.16	-2.3
3,479,318	+		DDA3937_RS15155	0.17	-0.9
3,479,318	+		DDA3937_RS15155	0.17	-0.8
3,479,673	-		DDA3937_RS15155	0.41	-1.3
3,479,673	-		DDA3937_RS15155	0.41	-0.3
3,479,673	-		DDA3937_RS15155	0.41	-0.7
3,479,673	-		DDA3937_RS15155	0.41	-1.8
3,479,677	-		DDA3937_RS15155	0.41	-1.1