Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS10385

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
2,339,943	-				+0.5
2,339,944	+				+1.3
2,339,945	-				+0.1
2,339,945	-				-0.2
2,339,945	-				+0.1
2,339,945	-				+2.1
2,339,948	+				+0.8
2,339,948	+				-0.5
2,339,948	+				+0.6
2,339,948	+				-0.1
2,339,948	+				+1.0
2,339,948	+				-0.5
2,339,948	+				+0.3
2,339,948	+				+0.5
2,339,949	-				+0.1
2,339,949	-				+0.5
2,339,949	-				+0.1
2,339,949	-				-0.6
2,339,949	-				+0.6
2,339,961	-				+0.2
2,339,961	-				-0.5
2,340,015	+				-0.0
2,340,015	+				+0.5
2,340,015	+				+0.1
2,340,016	-				+1.4
2,340,016	-				+0.5
2,340,016	-				+0.9
2,340,016	-				+0.6
2,340,016	-				+0.1
2,340,090	+		DDA3937_RS10380	0.15	-0.8
2,340,112	+		DDA3937_RS10380	0.17	-0.3
2,340,112	+		DDA3937_RS10380	0.17	+0.5
2,340,112	+		DDA3937_RS10380	0.17	-0.1
2,340,112	+		DDA3937_RS10380	0.17	+1.1
2,340,112	+		DDA3937_RS10380	0.17	-0.1
2,340,113	-		DDA3937_RS10380	0.17	+0.4
2,340,115	-		DDA3937_RS10380	0.17	+1.4
2,340,142	+		DDA3937_RS10380	0.20	+0.8
2,340,142	+		DDA3937_RS10380	0.20	+2.0
2,340,142	+		DDA3937_RS10380	0.20	+0.7
2,340,142	+		DDA3937_RS10380	0.20	+0.5
2,340,143	-		DDA3937_RS10380	0.20	+0.1
2,340,143	-		DDA3937_RS10380	0.20	-0.2
2,340,143	-		DDA3937_RS10380	0.20	+0.3
2,340,147	+		DDA3937_RS10380	0.21	-0.0
2,340,147	+		DDA3937_RS10380	0.21	+1.1
2,340,147	+		DDA3937_RS10380	0.21	+0.1
2,340,148	-		DDA3937_RS10380	0.21	-1.5
2,340,148	-		DDA3937_RS10380	0.21	+0.5
2,340,148	-		DDA3937_RS10380	0.21	-0.2
2,340,151	+		DDA3937_RS10380	0.21	+0.3
2,340,151	+		DDA3937_RS10380	0.21	+0.9
2,340,151	+		DDA3937_RS10380	0.21	+0.6
2,340,151	+		DDA3937_RS10380	0.21	+0.1
2,340,151	+		DDA3937_RS10380	0.21	+0.9
2,340,151	+		DDA3937_RS10380	0.21	-0.8
2,340,151	+		DDA3937_RS10380	0.21	+0.6
2,340,151	+		DDA3937_RS10380	0.21	-0.6
2,340,151	+		DDA3937_RS10380	0.21	-0.3
2,340,152	-		DDA3937_RS10380	0.21	+0.1
2,340,152	-		DDA3937_RS10380	0.21	+0.5
2,340,152	-		DDA3937_RS10380	0.21	-0.5
2,340,196	+		DDA3937_RS10380	0.26	+1.2
2,340,196	+		DDA3937_RS10380	0.26	+0.0
2,340,196	+		DDA3937_RS10380	0.26	+0.1
2,340,205	+		DDA3937_RS10380	0.27	+0.2
2,340,330	+		DDA3937_RS10380	0.41	+0.4
2,340,331	-		DDA3937_RS10380	0.41	+0.2
2,340,331	-		DDA3937_RS10380	0.41	-0.3
2,340,331	-		DDA3937_RS10380	0.41	+0.4
2,340,340	+		DDA3937_RS10380	0.42	+0.4
2,340,340	+		DDA3937_RS10380	0.42	+0.8
2,340,341	-		DDA3937_RS10380	0.42	+0.8
2,340,341	-		DDA3937_RS10380	0.42	+0.5
2,340,341	-		DDA3937_RS10380	0.42	-0.2
2,340,341	-		DDA3937_RS10380	0.42	+0.1
2,340,472	+		DDA3937_RS10380	0.56	+0.5
2,340,472	+		DDA3937_RS10380	0.56	-0.7
2,340,472	+		DDA3937_RS10380	0.56	+0.5
2,340,472	+		DDA3937_RS10380	0.56	+0.5
2,340,472	+		DDA3937_RS10380	0.56	+0.2
2,340,472	+		DDA3937_RS10380	0.56	-2.0
2,340,473	-		DDA3937_RS10380	0.56	+2.4
2,340,473	-		DDA3937_RS10380	0.56	+0.7
2,340,473	-		DDA3937_RS10380	0.56	+0.7
2,340,474	+		DDA3937_RS10380	0.56	+0.7
2,340,508	+		DDA3937_RS10380	0.60	+1.3
2,340,508	+		DDA3937_RS10380	0.60	+0.6
2,340,508	+		DDA3937_RS10380	0.60	+0.8
2,340,508	+		DDA3937_RS10380	0.60	+3.6
2,340,508	+		DDA3937_RS10380	0.60	+0.9
2,340,508	+		DDA3937_RS10380	0.60	+0.3
2,340,508	+		DDA3937_RS10380	0.60	+1.7
2,340,508	+		DDA3937_RS10380	0.60	-0.4
2,340,508	+		DDA3937_RS10380	0.60	-0.3
2,340,508	+		DDA3937_RS10380	0.60	+1.0
2,340,509	-		DDA3937_RS10380	0.60	+0.7
2,340,509	-		DDA3937_RS10380	0.60	-0.1
2,340,509	-		DDA3937_RS10380	0.60	+0.1
2,340,509	-		DDA3937_RS10380	0.60	+0.9
2,340,509	-		DDA3937_RS10380	0.60	+1.2
2,340,509	-		DDA3937_RS10380	0.60	+1.0
2,340,509	-		DDA3937_RS10380	0.60	+0.8
2,340,509	-		DDA3937_RS10380	0.60	+0.2
2,340,509	-		DDA3937_RS10380	0.60	+2.1
2,340,509	-		DDA3937_RS10380	0.60	+1.5
2,340,509	-		DDA3937_RS10380	0.60	+0.2
2,340,509	-		DDA3937_RS10380	0.60	+0.7
2,340,509	-		DDA3937_RS10380	0.60	+0.2
2,340,509	-		DDA3937_RS10380	0.60	+0.7
2,340,509	-		DDA3937_RS10380	0.60	-0.9
2,340,509	-		DDA3937_RS10380	0.60	-0.1
2,340,509	-		DDA3937_RS10380	0.60	+0.6
2,340,509	-		DDA3937_RS10380	0.60	+0.8
2,340,510	+		DDA3937_RS10380	0.60	+0.0
2,340,510	+		DDA3937_RS10380	0.60	-0.2
2,340,511	-		DDA3937_RS10380	0.60	-1.4
2,340,511	-		DDA3937_RS10380	0.60	-0.4
2,340,528	+		DDA3937_RS10380	0.62	+0.5
2,340,528	+		DDA3937_RS10380	0.62	-1.4
2,340,529	-		DDA3937_RS10380	0.62	+0.0
2,340,529	-		DDA3937_RS10380	0.62	-1.2
2,340,531	+		DDA3937_RS10380	0.62	+0.8
2,340,531	+		DDA3937_RS10380	0.62	+0.6
2,340,531	+		DDA3937_RS10380	0.62	+0.4
2,340,531	+		DDA3937_RS10380	0.62	+0.5
2,340,531	+		DDA3937_RS10380	0.62	+0.4
2,340,588	+		DDA3937_RS10380	0.69	+0.1
2,340,612	+		DDA3937_RS10380	0.71	+0.1
2,340,658	+		DDA3937_RS10380	0.76	+3.1
2,340,658	+		DDA3937_RS10380	0.76	+0.4
2,340,658	+		DDA3937_RS10380	0.76	-0.2
2,340,658	+		DDA3937_RS10380	0.76	+0.1
2,340,658	+		DDA3937_RS10380	0.76	+1.2
2,340,658	+		DDA3937_RS10380	0.76	+1.0
2,340,658	+		DDA3937_RS10380	0.76	+0.1
2,340,659	-		DDA3937_RS10380	0.76	-0.2
2,340,659	-		DDA3937_RS10380	0.76	+1.3
2,340,659	-		DDA3937_RS10380	0.76	-0.2
2,340,659	-		DDA3937_RS10380	0.76	+0.5
2,340,659	-		DDA3937_RS10380	0.76	+0.3
2,340,712	-		DDA3937_RS10380	0.82	+3.0
2,340,723	-		DDA3937_RS10380	0.83	-0.2
2,340,769	+		DDA3937_RS10380	0.88	-0.2
2,340,770	-		DDA3937_RS10380	0.88	+0.9
2,340,770	-		DDA3937_RS10380	0.88	+2.9
2,340,770	-		DDA3937_RS10380	0.88	-0.3
2,340,770	-		DDA3937_RS10380	0.88	-0.1
2,340,822	+				+0.5
2,340,823	-				+0.9
2,340,845	-				+0.9
2,340,871	+				+0.1
2,340,880	-				+0.3
2,340,900	+				-0.1
2,341,059	+		DDA3937_RS10385	0.19	-0.0
2,341,060	-		DDA3937_RS10385	0.19	-1.4
2,341,078	+		DDA3937_RS10385	0.21	+0.8
2,341,078	+		DDA3937_RS10385	0.21	+0.3
2,341,079	-		DDA3937_RS10385	0.21	+0.0
2,341,079	-		DDA3937_RS10385	0.21	-0.6
2,341,079	-		DDA3937_RS10385	0.21	+0.0
2,341,079	-		DDA3937_RS10385	0.21	+0.6
2,341,079	-		DDA3937_RS10385	0.21	+0.4
2,341,079	-		DDA3937_RS10385	0.21	-0.3
2,341,098	+		DDA3937_RS10385	0.23	+1.2
2,341,098	+		DDA3937_RS10385	0.23	+0.1
2,341,099	-		DDA3937_RS10385	0.23	-0.1
2,341,099	-		DDA3937_RS10385	0.23	-0.8
2,341,099	-		DDA3937_RS10385	0.23	+0.7
2,341,099	-		DDA3937_RS10385	0.23	+0.6
2,341,099	-		DDA3937_RS10385	0.23	-0.5
2,341,119	+		DDA3937_RS10385	0.25	+0.5
2,341,119	+		DDA3937_RS10385	0.25	-0.1
2,341,119	+		DDA3937_RS10385	0.25	+0.8
2,341,119	+		DDA3937_RS10385	0.25	-0.0
2,341,119	+		DDA3937_RS10385	0.25	-0.6
2,341,119	+		DDA3937_RS10385	0.25	+0.8
2,341,120	-		DDA3937_RS10385	0.25	+0.3
2,341,120	-		DDA3937_RS10385	0.25	+3.1
2,341,120	-		DDA3937_RS10385	0.25	-0.3
2,341,120	-		DDA3937_RS10385	0.25	-0.3
2,341,135	+		DDA3937_RS10385	0.27	+0.1
2,341,135	+		DDA3937_RS10385	0.27	+0.4
2,341,135	+		DDA3937_RS10385	0.27	+1.1
2,341,136	-		DDA3937_RS10385	0.27	+2.8
2,341,194	+		DDA3937_RS10385	0.34	+0.4
2,341,195	-		DDA3937_RS10385	0.34	-1.0
2,341,195	-		DDA3937_RS10385	0.34	-1.0
2,341,195	-		DDA3937_RS10385	0.34	+0.8
2,341,195	-		DDA3937_RS10385	0.34	+0.1
2,341,195	-		DDA3937_RS10385	0.34	+0.7
2,341,195	-		DDA3937_RS10385	0.34	-0.3
2,341,252	+		DDA3937_RS10385	0.40	+0.8
2,341,252	+		DDA3937_RS10385	0.40	+0.6
2,341,253	-		DDA3937_RS10385	0.40	-0.3
2,341,253	-		DDA3937_RS10385	0.40	+0.3
2,341,253	-		DDA3937_RS10385	0.40	+0.6
2,341,270	+		DDA3937_RS10385	0.42	+0.1
2,341,270	+		DDA3937_RS10385	0.42	+0.8
2,341,270	+		DDA3937_RS10385	0.42	+0.3
2,341,271	-		DDA3937_RS10385	0.42	+0.3
2,341,377	+		DDA3937_RS10385	0.54	+0.5
2,341,377	+		DDA3937_RS10385	0.54	-0.3
2,341,378	-		DDA3937_RS10385	0.54	-0.1
2,341,378	-		DDA3937_RS10385	0.54	+0.3
2,341,423	-		DDA3937_RS10385	0.59	+0.4
2,341,431	+		DDA3937_RS10385	0.60	+1.1
2,341,464	+		DDA3937_RS10385	0.63	+0.4
2,341,464	+		DDA3937_RS10385	0.63	+0.6
2,341,465	-		DDA3937_RS10385	0.63	-0.1
2,341,465	-		DDA3937_RS10385	0.63	+1.1
2,341,499	+		DDA3937_RS10385	0.67	+0.5
2,341,499	+		DDA3937_RS10385	0.67	+0.4
2,341,499	+		DDA3937_RS10385	0.67	+0.3
2,341,500	-		DDA3937_RS10385	0.67	-0.2
2,341,500	-		DDA3937_RS10385	0.67	-1.5
2,341,559	+				+1.7
2,341,559	+		DDA3937_RS10385	0.74	+0.3
2,341,559	+		DDA3937_RS10385	0.74	-0.1
2,341,559	+		DDA3937_RS10385	0.74	+1.9
2,341,559	+		DDA3937_RS10385	0.74	-0.2
2,341,559	+		DDA3937_RS10385	0.74	-0.5
2,341,559	+		DDA3937_RS10385	0.74	+0.2
2,341,560	-		DDA3937_RS10385	0.74	+1.4
2,341,560	-		DDA3937_RS10385	0.74	+0.3
2,341,560	-		DDA3937_RS10385	0.74	-0.3
2,341,560	-		DDA3937_RS10385	0.74	-0.1
2,341,560	-		DDA3937_RS10385	0.74	+0.2
2,341,561	+		DDA3937_RS10385	0.74	+0.6
2,341,561	+		DDA3937_RS10385	0.74	+0.6
2,341,561	+		DDA3937_RS10385	0.74	+1.6
2,341,561	+		DDA3937_RS10385	0.74	+0.4
2,341,562	-		DDA3937_RS10385	0.74	+0.2
2,341,562	-		DDA3937_RS10385	0.74	+0.5
2,341,562	-		DDA3937_RS10385	0.74	+0.8
2,341,562	-		DDA3937_RS10385	0.74	+0.0
2,341,675	-		DDA3937_RS10385	0.86	+0.5
2,341,810	+				+0.3
2,341,810	+				+0.4
2,341,810	+				+0.3
2,341,810	+				+0.4
2,341,810	+				-0.7
2,341,810	+				-0.2
2,341,811	-				+0.5
2,341,811	-				-0.9
2,341,822	+				+0.5
2,341,822	+				+0.5
2,341,822	+				+0.7
2,341,822	+				-0.0
2,341,822	+				-1.5
2,341,822	+				+0.5
2,341,822	+				+0.0
2,341,822	+				+1.4
2,341,822	+				+0.5
2,341,822	+				+0.0
2,341,823	-				-0.3
2,341,823	-				+2.7
2,341,823	-				+0.5
2,341,823	-				-0.1
2,341,823	-				+0.2
2,341,823	-				+0.9
2,341,823	-				-0.1
2,341,855	+				+1.1
2,341,879	+				+0.9
2,341,879	+				+0.2
2,341,880	-				+0.3
2,341,915	+		DDA3937_RS10390	0.10	-0.0
2,341,915	+		DDA3937_RS10390	0.10	+0.0
2,341,916	-		DDA3937_RS10390	0.10	-0.3
2,341,916	-		DDA3937_RS10390	0.10	-0.0
2,341,916	-		DDA3937_RS10390	0.10	-0.6
2,341,916	-		DDA3937_RS10390	0.10	+0.6
2,341,916	-		DDA3937_RS10390	0.10	+0.4
2,341,972	+		DDA3937_RS10390	0.16	+0.5
2,341,972	+		DDA3937_RS10390	0.16	+3.5
2,341,973	-		DDA3937_RS10390	0.16	-0.4
2,342,083	+		DDA3937_RS10390	0.27	+0.2
2,342,147	+		DDA3937_RS10390	0.34	-0.4
2,342,147	+		DDA3937_RS10390	0.34	+2.6
2,342,147	+		DDA3937_RS10390	0.34	+0.1
2,342,147	+		DDA3937_RS10390	0.34	+0.9
2,342,147	+		DDA3937_RS10390	0.34	+0.6
2,342,147	+		DDA3937_RS10390	0.34	+0.3
2,342,147	+		DDA3937_RS10390	0.34	+0.9
2,342,147	+		DDA3937_RS10390	0.34	+0.4
2,342,147	+		DDA3937_RS10390	0.34	+0.8
2,342,148	-		DDA3937_RS10390	0.34	+0.2
2,342,148	-		DDA3937_RS10390	0.34	-0.2
2,342,148	-		DDA3937_RS10390	0.34	+0.4
2,342,272	+		DDA3937_RS10390	0.46	+1.4
2,342,272	+		DDA3937_RS10390	0.46	-0.1
2,342,272	+		DDA3937_RS10390	0.46	-0.4
2,342,272	+		DDA3937_RS10390	0.46	-0.1
2,342,272	+		DDA3937_RS10390	0.46	-0.2
2,342,273	-		DDA3937_RS10390	0.46	+0.0
2,342,273	-		DDA3937_RS10390	0.46	+0.2
2,342,283	-		DDA3937_RS10390	0.47	+0.3
2,342,283	-		DDA3937_RS10390	0.47	+0.9
2,342,283	-		DDA3937_RS10390	0.47	+1.8
2,342,350	+		DDA3937_RS10390	0.54	+0.1
2,342,351	-		DDA3937_RS10390	0.54	-0.6
2,342,455	+		DDA3937_RS10390	0.65	-1.6
2,342,455	+		DDA3937_RS10390	0.65	-0.6
2,342,455	+		DDA3937_RS10390	0.65	-0.4
2,342,455	+		DDA3937_RS10390	0.65	+0.5
2,342,455	+		DDA3937_RS10390	0.65	+0.0
2,342,456	-		DDA3937_RS10390	0.65	+1.0
2,342,456	-		DDA3937_RS10390	0.65	+0.0
2,342,458	+		DDA3937_RS10390	0.65	+0.3
2,342,458	+		DDA3937_RS10390	0.65	-0.4
2,342,458	+		DDA3937_RS10390	0.65	+0.2
2,342,458	+		DDA3937_RS10390	0.65	+1.1
2,342,458	+		DDA3937_RS10390	0.65	+1.9
2,342,458	+		DDA3937_RS10390	0.65	-0.3
2,342,458	+		DDA3937_RS10390	0.65	+0.8
2,342,459	-		DDA3937_RS10390	0.65	-0.8
2,342,459	-		DDA3937_RS10390	0.65	+0.2
2,342,459	-		DDA3937_RS10390	0.65	-0.1
2,342,459	-		DDA3937_RS10390	0.65	+0.3
2,342,459	-		DDA3937_RS10390	0.65	+0.3
2,342,459	-		DDA3937_RS10390	0.65	+0.1
2,342,464	+		DDA3937_RS10390	0.66	+0.6
2,342,464	+		DDA3937_RS10390	0.66	+0.3
2,342,464	+		DDA3937_RS10390	0.66	+1.9
2,342,465	-		DDA3937_RS10390	0.66	+0.1
2,342,465	-		DDA3937_RS10390	0.66	-0.0
2,342,465	-		DDA3937_RS10390	0.66	-0.2
2,342,516	+		DDA3937_RS10390	0.71	+1.9
2,342,517	-		DDA3937_RS10390	0.71	+0.9
2,342,517	-		DDA3937_RS10390	0.71	+0.2
2,342,517	-		DDA3937_RS10390	0.71	+1.6
2,342,517	-		DDA3937_RS10390	0.71	+0.6
2,342,517	-		DDA3937_RS10390	0.71	-0.3
2,342,517	-		DDA3937_RS10390	0.71	+1.8
2,342,528	-		DDA3937_RS10390	0.72	+0.1
2,342,537	+		DDA3937_RS10390	0.73	-0.5
2,342,538	-		DDA3937_RS10390	0.73	+0.2
2,342,579	+		DDA3937_RS10390	0.77	+0.4
2,342,580	-		DDA3937_RS10390	0.77	-0.6
2,342,580	-		DDA3937_RS10390	0.77	+1.6
2,342,641	+		DDA3937_RS10390	0.84	+0.5
2,342,641	+		DDA3937_RS10390	0.84	+0.0
2,342,642	-		DDA3937_RS10390	0.84	+0.3
2,342,642	-		DDA3937_RS10390	0.84	+0.7
2,342,708	+				+1.0
2,342,708	+				+0.4
2,342,709	-				-1.1
2,342,796	+				+0.6
2,342,796	+				-0.5
2,342,796	+				+1.0
2,342,796	+				-1.9
2,342,796	+				+0.2
2,342,796	+				+0.7
2,342,796	+				+0.9
2,342,797	-				-0.5
2,342,797	-				+0.3
2,342,797	-				+0.4
2,342,797	-				-0.3
2,342,797	-				+0.7