Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS17690

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
4,029,864	+		DDA3937_RS17685	0.67	-0.3
4,029,917	+		DDA3937_RS17685	0.69	+0.3
4,029,918	-		DDA3937_RS17685	0.70	+0.1
4,029,918	-		DDA3937_RS17685	0.70	-0.3
4,029,918	-		DDA3937_RS17685	0.70	+0.6
4,029,918	-		DDA3937_RS17685	0.70	+0.4
4,029,918	-		DDA3937_RS17685	0.70	+0.2
4,029,918	-		DDA3937_RS17685	0.70	-0.7
4,030,291	+		DDA3937_RS17685	0.84	-1.3
4,030,291	+		DDA3937_RS17685	0.84	+0.8
4,030,291	+		DDA3937_RS17685	0.84	+0.1
4,030,291	+		DDA3937_RS17685	0.84	+0.4
4,030,291	+		DDA3937_RS17685	0.84	+0.7
4,030,291	+		DDA3937_RS17685	0.84	-0.8
4,030,291	+		DDA3937_RS17685	0.84	+0.2
4,030,291	+		DDA3937_RS17685	0.84	-0.8
4,030,291	+		DDA3937_RS17685	0.84	-0.3
4,030,291	+		DDA3937_RS17685	0.84	-0.2
4,030,292	-		DDA3937_RS17685	0.85	-0.2
4,030,292	-		DDA3937_RS17685	0.85	+1.6
4,030,292	-		DDA3937_RS17685	0.85	+0.1
4,030,292	-		DDA3937_RS17685	0.85	-1.9
4,030,292	-		DDA3937_RS17685	0.85	-1.3
4,030,393	+		DDA3937_RS17685	0.89	+0.4
4,030,673	+				+0.2
4,030,673	+				+2.0
4,030,673	+				-1.1
4,030,673	+				-0.4
4,030,673	+				+1.1
4,030,673	+				-0.6
4,030,673	+				-0.1
4,030,673	+				+0.1
4,030,673	+				+0.6
4,030,674	-				+0.8
4,030,674	-				-0.5
4,030,674	-				-1.7
4,030,674	-				-1.8
4,030,674	-				-2.3
4,030,674	-				-0.1
4,030,913	-				+0.4
4,031,151	+		DDA3937_RS17690	0.12	-0.7
4,031,272	-		DDA3937_RS17690	0.15	-0.8
4,031,272	-		DDA3937_RS17690	0.15	-0.2
4,031,469	+		DDA3937_RS17690	0.21	-2.1
4,031,470	-		DDA3937_RS17690	0.21	-0.4
4,031,624	+		DDA3937_RS17690	0.25	-0.5
4,031,624	+		DDA3937_RS17690	0.25	-1.2
4,031,624	+		DDA3937_RS17690	0.25	+1.4
4,031,624	+		DDA3937_RS17690	0.25	+0.0
4,031,625	-		DDA3937_RS17690	0.25	-1.4
4,031,625	-		DDA3937_RS17690	0.25	-0.8
4,031,728	-		DDA3937_RS17690	0.27	-0.9
4,031,728	-		DDA3937_RS17690	0.27	-1.1
4,031,728	-		DDA3937_RS17690	0.27	+0.7
4,031,797	+		DDA3937_RS17690	0.29	+0.7
4,031,797	+		DDA3937_RS17690	0.29	+2.0
4,031,797	+		DDA3937_RS17690	0.29	-0.6
4,031,797	+		DDA3937_RS17690	0.29	+0.7
4,031,797	+		DDA3937_RS17690	0.29	+1.6
4,031,798	-		DDA3937_RS17690	0.29	-0.0
4,031,798	-		DDA3937_RS17690	0.29	-0.2
4,031,798	-		DDA3937_RS17690	0.29	+0.3
4,031,798	-		DDA3937_RS17690	0.29	-1.4
4,031,799	+		DDA3937_RS17690	0.29	-0.1
4,031,799	+		DDA3937_RS17690	0.29	-0.4
4,031,799	+		DDA3937_RS17690	0.29	+1.2
4,031,800	-		DDA3937_RS17690	0.29	+0.4
4,031,800	-		DDA3937_RS17690	0.29	-2.4
4,031,800	-		DDA3937_RS17690	0.29	+1.1
4,031,800	-		DDA3937_RS17690	0.29	-0.6
4,031,803	+		DDA3937_RS17690	0.29	-0.5
4,031,803	+		DDA3937_RS17690	0.29	-0.2
4,031,803	+		DDA3937_RS17690	0.29	-0.3
4,031,803	+		DDA3937_RS17690	0.29	-0.6
4,031,803	+		DDA3937_RS17690	0.29	-0.5
4,031,803	+		DDA3937_RS17690	0.29	+0.1
4,031,803	+		DDA3937_RS17690	0.29	-0.5
4,031,803	+		DDA3937_RS17690	0.29	+0.5
4,031,804	-		DDA3937_RS17690	0.29	-0.5
4,031,804	-		DDA3937_RS17690	0.29	+0.2
4,031,804	-		DDA3937_RS17690	0.29	+0.7
4,031,804	-		DDA3937_RS17690	0.29	+2.6
4,031,804	-		DDA3937_RS17690	0.29	-0.5
4,031,804	-		DDA3937_RS17690	0.29	+0.2
4,031,973	-		DDA3937_RS17690	0.34	+0.1
4,031,973	-		DDA3937_RS17690	0.34	-2.1
4,032,189	+		DDA3937_RS17690	0.39	+0.1
4,032,345	+		DDA3937_RS17690	0.43	+2.2
4,032,346	-		DDA3937_RS17690	0.43	-0.8
4,032,388	-		DDA3937_RS17690	0.44	+0.8
4,032,388	-		DDA3937_RS17690	0.44	+0.1
4,032,425	+		DDA3937_RS17690	0.45	+2.7
4,032,425	+		DDA3937_RS17690	0.45	-0.5
4,032,426	-		DDA3937_RS17690	0.45	-0.3
4,032,426	-		DDA3937_RS17690	0.45	-0.6
4,032,426	-		DDA3937_RS17690	0.45	-0.1
4,032,600	+		DDA3937_RS17690	0.50	-0.2
4,032,601	-		DDA3937_RS17690	0.50	-0.6
4,032,663	+		DDA3937_RS17690	0.51	-0.9
4,032,664	-		DDA3937_RS17690	0.51	+0.1
4,032,670	-		DDA3937_RS17690	0.52	-0.4
4,032,769	+		DDA3937_RS17690	0.54	+1.6
4,032,769	+		DDA3937_RS17690	0.54	+0.2
4,032,770	-		DDA3937_RS17690	0.54	+0.5
4,033,011	+		DDA3937_RS17690	0.60	-0.1
4,033,364	+		DDA3937_RS17690	0.70	-0.2
4,033,372	+		DDA3937_RS17690	0.70	+0.2
4,033,373	-		DDA3937_RS17690	0.70	+0.1
4,033,416	+		DDA3937_RS17690	0.71	-1.5
4,033,428	-		DDA3937_RS17690	0.71	-0.9
4,033,458	+		DDA3937_RS17690	0.72	-0.0
4,033,459	-		DDA3937_RS17690	0.72	+0.1
4,033,506	+		DDA3937_RS17690	0.73	-0.4
4,033,506	+		DDA3937_RS17690	0.73	-0.9
4,033,506	+		DDA3937_RS17690	0.73	+0.2
4,033,507	-		DDA3937_RS17690	0.73	-0.0
4,033,553	+		DDA3937_RS17690	0.74	+0.2
4,033,553	+		DDA3937_RS17690	0.74	-0.0
4,033,564	-		DDA3937_RS17690	0.75	+0.1
4,033,564	-		DDA3937_RS17690	0.75	-0.9
4,033,564	-		DDA3937_RS17690	0.75	-0.4
4,033,564	-		DDA3937_RS17690	0.75	-0.2
4,033,564	-		DDA3937_RS17690	0.75	-0.8
4,033,895	+		DDA3937_RS17690	0.83	+1.1
4,033,956	-		DDA3937_RS17690	0.85	+0.7
4,034,085	+		DDA3937_RS17690	0.88	+2.0
4,034,178	+				+1.0
4,034,178	+				-1.4
4,034,179	-				+0.7
4,034,179	-				-0.2
4,034,179	-				-0.6
4,034,499	+				-3.3
4,034,499	+				+2.0
4,034,565	-				-0.2
4,034,599	+				+0.1
4,034,627	+				-0.8
4,034,627	+				+1.1
4,034,627	+				+1.1
4,034,627	+				-0.7
4,034,628	-				+1.2
4,034,740	+				+1.8
4,034,740	+				+0.2
4,034,740	+				-0.6
4,034,740	+				+0.3
4,034,741	-				+1.9
4,034,741	-				-3.4
4,034,741	-				+0.4
4,034,741	-				-2.0
4,034,741	-				+2.0
4,034,797	+				+1.9
4,034,798	-				+1.1
4,034,798	-				-1.2
4,034,863	-				+0.1
4,034,878	+				+1.7
4,034,896	+				-0.9
4,034,897	-				-0.2
4,034,909	-				+0.4
4,034,909	-				-1.2
4,034,926	+				-0.7
4,035,205	+		DDA3937_RS17695	0.20	+0.2
4,035,206	-		DDA3937_RS17695	0.20	-0.5
4,035,206	-				+1.1
4,035,208	+		DDA3937_RS17695	0.21	-0.1
4,035,208	+		DDA3937_RS17695	0.21	-1.4
4,035,209	-		DDA3937_RS17695	0.21	+1.9
4,035,209	-				-0.2