Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS13385

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
3,055,719	+		DDA3937_RS13380	0.30	+0.7
3,055,719	+		DDA3937_RS13380	0.30	-0.4
3,055,763	+		DDA3937_RS13380	0.33	+1.1
3,055,764	-		DDA3937_RS13380	0.33	+1.3
3,055,839	-		DDA3937_RS13380	0.39	+1.2
3,055,839	-		DDA3937_RS13380	0.39	+0.2
3,055,839	-		DDA3937_RS13380	0.39	+0.4
3,055,868	+		DDA3937_RS13380	0.41	-1.2
3,055,900	-		DDA3937_RS13380	0.43	-0.4
3,055,900	-		DDA3937_RS13380	0.43	+0.1
3,055,900	-		DDA3937_RS13380	0.43	+1.0
3,055,901	+		DDA3937_RS13380	0.43	-0.4
3,055,902	-		DDA3937_RS13380	0.43	+0.3
3,055,902	-		DDA3937_RS13380	0.43	-1.1
3,055,921	+		DDA3937_RS13380	0.44	+4.5
3,055,921	+		DDA3937_RS13380	0.44	+0.8
3,055,922	-				-1.4
3,055,973	+		DDA3937_RS13380	0.48	+0.1
3,056,045	+		DDA3937_RS13380	0.54	-0.2
3,056,061	+		DDA3937_RS13380	0.55	-0.5
3,056,062	-		DDA3937_RS13380	0.55	+0.5
3,056,062	-		DDA3937_RS13380	0.55	+2.1
3,056,062	-		DDA3937_RS13380	0.55	-0.4
3,056,062	-		DDA3937_RS13380	0.55	+0.2
3,056,066	+		DDA3937_RS13380	0.55	-1.2
3,056,066	+		DDA3937_RS13380	0.55	-0.6
3,056,107	+		DDA3937_RS13380	0.58	-0.4
3,056,107	+				+1.0
3,056,107	+		DDA3937_RS13380	0.58	+1.1
3,056,107	+		DDA3937_RS13380	0.58	+2.0
3,056,107	+		DDA3937_RS13380	0.58	+0.7
3,056,107	+		DDA3937_RS13380	0.58	-0.4
3,056,107	+		DDA3937_RS13380	0.58	+1.6
3,056,108	-		DDA3937_RS13380	0.58	+0.6
3,056,108	-		DDA3937_RS13380	0.58	-0.3
3,056,108	-		DDA3937_RS13380	0.58	-1.8
3,056,108	-		DDA3937_RS13380	0.58	+2.6
3,056,108	-		DDA3937_RS13380	0.58	-0.7
3,056,108	-		DDA3937_RS13380	0.58	+1.4
3,056,108	-		DDA3937_RS13380	0.58	+0.0
3,056,108	-		DDA3937_RS13380	0.58	-0.2
3,056,117	+		DDA3937_RS13380	0.59	+0.1
3,056,117	+		DDA3937_RS13380	0.59	-2.1
3,056,216	+		DDA3937_RS13380	0.66	+1.2
3,056,234	-		DDA3937_RS13380	0.67	-0.2
3,056,252	+		DDA3937_RS13380	0.69	-0.4
3,056,252	+		DDA3937_RS13380	0.69	+0.5
3,056,253	-		DDA3937_RS13380	0.69	-1.1
3,056,270	+		DDA3937_RS13380	0.70	-0.1
3,056,270	+		DDA3937_RS13380	0.70	-2.2
3,056,271	-		DDA3937_RS13380	0.70	-1.6
3,056,285	+		DDA3937_RS13380	0.71	+1.4
3,056,357	+		DDA3937_RS13380	0.76	-0.8
3,056,357	+		DDA3937_RS13380	0.76	-0.3
3,056,358	-		DDA3937_RS13380	0.76	+0.2
3,056,358	-		DDA3937_RS13380	0.76	+1.0
3,056,358	-		DDA3937_RS13380	0.76	-1.3
3,056,395	-		DDA3937_RS13380	0.79	+0.5
3,056,420	+		DDA3937_RS13380	0.81	+1.2
3,056,420	+		DDA3937_RS13380	0.81	+2.8
3,056,421	-		DDA3937_RS13380	0.81	+0.4
3,056,421	-		DDA3937_RS13380	0.81	+1.3
3,056,423	+		DDA3937_RS13380	0.81	+0.6
3,056,446	+		DDA3937_RS13380	0.83	+0.4
3,056,446	+		DDA3937_RS13380	0.83	+0.3
3,056,446	+		DDA3937_RS13380	0.83	+2.2
3,056,446	+		DDA3937_RS13380	0.83	+0.6
3,056,446	+		DDA3937_RS13380	0.83	-0.0
3,056,446	+		DDA3937_RS13380	0.83	-0.0
3,056,446	+		DDA3937_RS13380	0.83	+0.7
3,056,447	-		DDA3937_RS13380	0.83	-0.8
3,056,447	-		DDA3937_RS13380	0.83	-0.8
3,056,460	+		DDA3937_RS13380	0.84	+1.3
3,056,500	-		DDA3937_RS13380	0.87	+1.7
3,056,500	-		DDA3937_RS13380	0.87	+3.1
3,056,500	-		DDA3937_RS13380	0.87	+4.4
3,056,523	-		DDA3937_RS13380	0.88	-0.0
3,056,523	-		DDA3937_RS13380	0.88	+2.1
3,056,523	-		DDA3937_RS13380	0.88	-1.1
3,056,535	+		DDA3937_RS13380	0.89	+2.6
3,056,535	+		DDA3937_RS13380	0.89	+0.4
3,056,572	+				+0.1
3,056,572	+				+0.7
3,056,658	-				+0.1
3,056,671	-				-0.8
3,056,673	-				-0.3
3,056,704	+				+0.3
3,056,704	+				+0.4
3,056,705	-				-0.7
3,056,807	-		DDA3937_RS13385	0.27	-0.4
3,056,817	+		DDA3937_RS13385	0.29	+0.2
3,056,818	-		DDA3937_RS13385	0.29	+2.8
3,056,818	-		DDA3937_RS13385	0.29	-0.9
3,056,818	-		DDA3937_RS13385	0.29	+0.7
3,056,894	+		DDA3937_RS13385	0.46	+0.4
3,056,905	+		DDA3937_RS13385	0.49	+0.5
3,056,950	-		DDA3937_RS13385	0.59	+0.6
3,056,952	+		DDA3937_RS13385	0.59	+1.1
3,056,952	+		DDA3937_RS13385	0.59	+0.4
3,056,952	+		DDA3937_RS13385	0.59	+1.1
3,056,952	+		DDA3937_RS13385	0.59	+1.1
3,057,022	+		DDA3937_RS13385	0.75	+0.6
3,057,022	+		DDA3937_RS13385	0.75	+0.5
3,057,022	+		DDA3937_RS13385	0.75	+0.8
3,057,023	-		DDA3937_RS13385	0.76	-1.4
3,057,023	-		DDA3937_RS13385	0.76	-0.8
3,057,023	-		DDA3937_RS13385	0.76	+0.5
3,057,049	+		DDA3937_RS13385	0.81	+1.5
3,057,050	-		DDA3937_RS13385	0.82	-0.4
3,057,128	+				-0.2
3,057,128	+				+0.5
3,057,129	-				-1.2
3,057,129	-				-0.0
3,057,129	-				-0.4
3,057,133	-				+0.7
3,057,133	-				-0.4
3,057,133	-				-0.2
3,057,133	-				+0.2
3,057,203	+				+2.1
3,057,204	-				+1.1
3,057,231	-				+1.0
3,057,231	-				-0.6
3,057,396	+		DDA3937_RS13390	0.20	+0.9
3,057,516	+		DDA3937_RS13390	0.29	-1.5
3,057,545	+		DDA3937_RS13390	0.31	+1.6
3,057,553	-		DDA3937_RS13390	0.32	-2.3
3,057,553	-		DDA3937_RS13390	0.32	-0.9
3,057,582	+		DDA3937_RS13390	0.34	+1.0
3,057,582	+		DDA3937_RS13390	0.34	-2.1
3,057,735	+		DDA3937_RS13390	0.45	+0.6
3,057,738	+		DDA3937_RS13390	0.46	+0.2
3,057,738	+		DDA3937_RS13390	0.46	+3.1
3,057,768	+		DDA3937_RS13390	0.48	+2.4
3,057,768	+		DDA3937_RS13390	0.48	+0.2
3,057,769	-		DDA3937_RS13390	0.48	+3.2
3,057,825	+		DDA3937_RS13390	0.52	-1.5
3,057,825	+		DDA3937_RS13390	0.52	+1.6
3,057,825	+		DDA3937_RS13390	0.52	+0.9
3,057,826	-		DDA3937_RS13390	0.52	-0.5
3,057,826	-		DDA3937_RS13390	0.52	-0.2
3,057,826	-		DDA3937_RS13390	0.52	+2.1
3,057,826	-		DDA3937_RS13390	0.52	+0.5
3,057,826	-		DDA3937_RS13390	0.52	-1.2
3,057,826	-		DDA3937_RS13390	0.52	+1.6
3,057,865	-		DDA3937_RS13390	0.55	+1.2
3,057,977	+		DDA3937_RS13390	0.64	+0.2
3,057,978	-		DDA3937_RS13390	0.64	-3.0