Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS09250

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
2,078,360	+				-2.3
2,078,360	+				-0.5
2,078,476	-				-0.7
2,078,544	-				-0.6
2,078,544	-				+0.4
2,078,591	-				-0.9
2,078,608	+				-0.1
2,078,609	-				-0.1
2,078,609	-				+1.0
2,078,609	-				-1.7
2,078,726	+		DDA3937_RS09245	0.19	-0.3
2,078,726	+		DDA3937_RS09245	0.19	+0.2
2,078,726	+		DDA3937_RS09245	0.19	+0.1
2,078,726	+		DDA3937_RS09245	0.19	-0.1
2,078,726	+		DDA3937_RS09245	0.19	+1.5
2,078,727	-		DDA3937_RS09245	0.19	+1.3
2,078,727	-		DDA3937_RS09245	0.19	-0.1
2,078,727	-		DDA3937_RS09245	0.19	-0.3
2,078,727	-		DDA3937_RS09245	0.19	-0.8
2,078,789	-		DDA3937_RS09245	0.28	-1.5
2,078,806	+		DDA3937_RS09245	0.30	+0.6
2,078,806	+		DDA3937_RS09245	0.30	+0.5
2,078,807	-		DDA3937_RS09245	0.30	+1.4
2,078,807	-		DDA3937_RS09245	0.30	-0.3
2,078,807	-		DDA3937_RS09245	0.30	-1.1
2,078,807	-		DDA3937_RS09245	0.30	+0.3
2,078,810	+		DDA3937_RS09245	0.31	-1.7
2,078,810	+		DDA3937_RS09245	0.31	+1.2
2,078,811	-		DDA3937_RS09245	0.31	+0.5
2,078,871	+		DDA3937_RS09245	0.39	-3.3
2,078,872	-		DDA3937_RS09245	0.40	+0.3
2,078,877	+		DDA3937_RS09245	0.40	-0.2
2,078,878	-		DDA3937_RS09245	0.40	-0.6
2,078,902	+		DDA3937_RS09245	0.44	+2.3
2,078,903	-		DDA3937_RS09245	0.44	-1.7
2,078,916	+		DDA3937_RS09245	0.46	+0.0
2,078,916	+		DDA3937_RS09245	0.46	-0.2
2,078,916	+		DDA3937_RS09245	0.46	-2.2
2,078,944	+		DDA3937_RS09245	0.50	+0.8
2,078,952	+		DDA3937_RS09245	0.51	-0.4
2,078,953	-		DDA3937_RS09245	0.51	-1.6
2,079,000	-		DDA3937_RS09245	0.58	+0.7
2,079,028	+		DDA3937_RS09245	0.61	-0.6
2,079,069	+		DDA3937_RS09245	0.67	+2.5
2,079,100	+		DDA3937_RS09245	0.72	+0.5
2,079,142	+		DDA3937_RS09245	0.77	-1.2
2,079,232	+				-1.3
2,079,232	+				+0.7
2,079,232	+				-0.6
2,079,232	+				-0.3
2,079,232	+				-0.5
2,079,232	+				-1.1
2,079,233	-				+0.2
2,079,233	-				+1.8
2,079,233	-				-1.2
2,079,233	-				+0.2
2,079,299	+				+0.1
2,079,300	-				-2.2
2,079,334	+				-1.2
2,079,334	+				-0.7
2,079,334	+				-1.3
2,079,334	+				-1.2
2,079,335	-				+0.2
2,079,335	-				-0.3
2,079,445	+		DDA3937_RS09250	0.11	-1.3
2,079,469	+		DDA3937_RS09250	0.14	-0.8
2,079,472	+		DDA3937_RS09250	0.14	-0.3
2,079,472	+		DDA3937_RS09250	0.14	+0.0
2,079,473	-		DDA3937_RS09250	0.14	+2.7
2,079,473	-				+1.3
2,079,473	-		DDA3937_RS09250	0.14	+1.9
2,079,473	-		DDA3937_RS09250	0.14	+1.5
2,079,473	-		DDA3937_RS09250	0.14	-0.2
2,079,473	-		DDA3937_RS09250	0.14	+0.6
2,079,473	-		DDA3937_RS09250	0.14	+0.3
2,079,474	+		DDA3937_RS09250	0.14	-0.7
2,079,474	+		DDA3937_RS09250	0.14	-1.1
2,079,474	+		DDA3937_RS09250	0.14	-1.3
2,079,474	+		DDA3937_RS09250	0.14	+0.5
2,079,474	+		DDA3937_RS09250	0.14	-0.9
2,079,474	+		DDA3937_RS09250	0.14	+0.4
2,079,474	+		DDA3937_RS09250	0.14	-0.6
2,079,474	+		DDA3937_RS09250	0.14	-0.9
2,079,475	-		DDA3937_RS09250	0.14	+0.1
2,079,475	-		DDA3937_RS09250	0.14	-0.4
2,079,475	-		DDA3937_RS09250	0.14	-2.7
2,079,475	-		DDA3937_RS09250	0.14	+1.8
2,079,475	-		DDA3937_RS09250	0.14	-1.4
2,079,475	-		DDA3937_RS09250	0.14	-1.9
2,079,475	-		DDA3937_RS09250	0.14	+0.7
2,079,579	+		DDA3937_RS09250	0.26	+0.7
2,079,579	+		DDA3937_RS09250	0.26	+0.8
2,079,580	-		DDA3937_RS09250	0.26	+0.7
2,079,649	-		DDA3937_RS09250	0.34	-1.1
2,079,823	+		DDA3937_RS09250	0.55	+0.1
2,079,824	-		DDA3937_RS09250	0.55	+1.3
2,079,824	-		DDA3937_RS09250	0.55	+1.3
2,079,824	-				-0.3
2,079,996	+		DDA3937_RS09250	0.75	-1.2
2,079,996	+		DDA3937_RS09250	0.75	-0.5
2,079,996	+		DDA3937_RS09250	0.75	+0.0
2,079,997	-		DDA3937_RS09250	0.75	+1.1
2,079,997	-		DDA3937_RS09250	0.75	+0.9
2,079,997	-		DDA3937_RS09250	0.75	+0.6
2,079,997	-		DDA3937_RS09250	0.75	+0.4
2,080,035	+		DDA3937_RS09250	0.79	-1.7
2,080,204	-				-1.3
2,080,204	-				-1.1
2,080,204	-				-1.7
2,080,227	+				-2.2
2,080,239	-				+0.3
2,080,283	+				-2.9
2,080,283	+				-1.3
2,080,283	+				+0.1
2,080,283	+				+1.7
2,080,284	-				+0.5
2,080,284	-				-0.2
2,080,284	-				-0.7
2,080,320	+				-0.3
2,080,320	+				+0.3
2,080,320	+				+0.8
2,080,320	+				+0.6
2,080,320	+				-1.1
2,080,320	+				+1.7
2,080,320	+				+2.5
2,080,320	+				+0.6
2,080,321	-				+1.0
2,080,321	-				-0.3
2,080,321	-				+1.0
2,080,321	-				-0.3
2,080,321	-				-1.7
2,080,321	-				+1.0
2,080,321	-				+0.9
2,080,321	-				-1.2
2,080,321	-				+0.3
2,080,321	-				+1.5
2,080,321	-				-0.1
2,080,334	+				-0.5
2,080,334	+				-2.2
2,080,334	+				-0.5
2,080,334	+				+1.2
2,080,334	+				-1.5
2,080,334	+				+0.7
2,080,334	+				-0.7
2,080,334	+				+0.1
2,080,335	-				+0.7
2,080,335	-				+1.6
2,080,335	-				-0.3
2,080,335	-				-1.2
2,080,335	-				-1.5
2,080,335	-				+0.3
2,080,348	+				+0.0
2,080,348	+				+1.3
2,080,348	+				-0.3
2,080,348	+				-2.2
2,080,348	+				-0.1
2,080,348	+				+0.3
2,080,348	+				-0.1
2,080,348	+				+0.7
2,080,348	+				-1.1
2,080,348	+				-1.1
2,080,348	+				-0.6
2,080,348	+				+0.4
2,080,348	+				-1.5
2,080,348	+				+0.0
2,080,349	-				-0.9
2,080,349	-				-0.7
2,080,349	-				-0.2
2,080,349	-				-1.3
2,080,349	-				-0.1
2,080,349	-				-0.7
2,080,349	-				+1.0
2,080,349	-				+0.3
2,080,349	-				+0.1
2,080,349	-				-0.1
2,080,349	-				+0.3
2,080,349	-				-0.2
2,080,349	-				+3.2
2,080,352	+				-0.5
2,080,352	+				+0.7
2,080,352	+				-2.7
2,080,352	+				+0.8
2,080,352	+				+0.7
2,080,352	+				-0.1
2,080,352	+				-2.4
2,080,352	+				+0.3
2,080,353	-				+1.8
2,080,353	-				+0.7
2,080,353	-				+1.3
2,080,353	-				-1.3
2,080,379	+				-2.3
2,080,741	+		DDA3937_RS09255	0.35	-0.0
2,080,815	+		DDA3937_RS09255	0.42	+0.7
2,080,838	-		DDA3937_RS09255	0.44	-2.5
2,080,841	+		DDA3937_RS09255	0.44	-1.2
2,080,852	+		DDA3937_RS09255	0.45	+0.7
2,080,854	+		DDA3937_RS09255	0.46	+0.8
2,080,854	+		DDA3937_RS09255	0.46	-2.2
2,080,854	+		DDA3937_RS09255	0.46	+0.4
2,080,855	-		DDA3937_RS09255	0.46	+0.3
2,080,872	+		DDA3937_RS09255	0.47	-0.3
2,080,872	+		DDA3937_RS09255	0.47	+0.7
2,081,163	+		DDA3937_RS09255	0.74	+0.0
2,081,163	+				+0.3
2,081,164	-		DDA3937_RS09255	0.74	-1.7