Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS17050

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
3,881,228	+		DDA3937_RS17045	0.35	-1.5
3,881,228	+		DDA3937_RS17045	0.35	+0.1
3,881,228	+		DDA3937_RS17045	0.35	-1.2
3,881,229	-		DDA3937_RS17045	0.35	-2.2
3,881,229	-		DDA3937_RS17045	0.35	-0.9
3,881,229	-		DDA3937_RS17045	0.35	+0.7
3,881,360	+		DDA3937_RS17045	0.45	+0.7
3,881,360	+		DDA3937_RS17045	0.45	-0.1
3,881,360	+		DDA3937_RS17045	0.45	-1.9
3,881,361	-				-0.5
3,881,361	-		DDA3937_RS17045	0.45	-0.9
3,881,500	+		DDA3937_RS17045	0.56	-0.1
3,881,500	+		DDA3937_RS17045	0.56	+0.1
3,881,638	+		DDA3937_RS17045	0.66	+2.2
3,881,638	+		DDA3937_RS17045	0.66	-0.4
3,881,639	-		DDA3937_RS17045	0.66	-1.6
3,881,639	-		DDA3937_RS17045	0.66	+0.1
3,881,639	-		DDA3937_RS17045	0.66	-1.0
3,881,706	+		DDA3937_RS17045	0.71	+0.1
3,881,858	-		DDA3937_RS17045	0.82	-1.5
3,881,873	+		DDA3937_RS17045	0.83	-1.9
3,881,873	+		DDA3937_RS17045	0.83	-0.8
3,881,874	-		DDA3937_RS17045	0.83	-0.7
3,881,874	-		DDA3937_RS17045	0.83	+0.1
3,881,874	-		DDA3937_RS17045	0.83	+0.4
3,881,978	+				-0.8
3,881,993	-				-1.0
3,882,059	+				+0.8
3,882,066	-				-0.7
3,882,066	-				+0.1
3,882,066	-				-0.8
3,882,098	+				-0.2
3,882,113	-				+0.2
3,882,128	+				+0.4
3,882,133	-				-0.2
3,882,187	+				+0.1
3,882,187	+				+0.4
3,882,187	+				-0.5
3,882,188	-				-1.1
3,882,267	-		DDA3937_RS17050	0.11	-1.2
3,882,412	-		DDA3937_RS17050	0.22	+0.5
3,882,950	-		DDA3937_RS17050	0.62	-1.1
3,882,982	+		DDA3937_RS17050	0.64	+0.9
3,882,983	-		DDA3937_RS17050	0.64	-1.5
3,883,015	+		DDA3937_RS17050	0.66	-1.7
3,883,015	+		DDA3937_RS17050	0.66	-1.4
3,883,015	+		DDA3937_RS17050	0.66	+0.8
3,883,015	+		DDA3937_RS17050	0.66	+1.1
3,883,015	+		DDA3937_RS17050	0.66	+1.5
3,883,015	+		DDA3937_RS17050	0.66	+0.2
3,883,015	+		DDA3937_RS17050	0.66	+0.7
3,883,015	+		DDA3937_RS17050	0.66	-0.5
3,883,016	-		DDA3937_RS17050	0.66	-0.1
3,883,016	-		DDA3937_RS17050	0.66	+1.1
3,883,016	-		DDA3937_RS17050	0.66	+1.3
3,883,016	-		DDA3937_RS17050	0.66	+0.1
3,883,016	-		DDA3937_RS17050	0.66	-0.1
3,883,016	-		DDA3937_RS17050	0.66	-0.3
3,883,288	+		DDA3937_RS17050	0.86	+0.1
3,883,288	+		DDA3937_RS17050	0.86	-0.7
3,883,289	-		DDA3937_RS17050	0.86	-0.7
3,883,289	-		DDA3937_RS17050	0.86	-1.3
3,883,318	-		DDA3937_RS17050	0.89	-0.4
3,883,370	-				-0.8
3,883,412	-				+0.3
3,883,463	+				-0.3
3,883,473	-				-0.1
3,883,473	-				+0.4
3,883,489	+				-0.9
3,883,489	+				+0.3
3,883,489	+				-0.6
3,883,489	+				-1.2
3,883,489	+				-1.5
3,883,490	-				-1.2
3,883,506	+				+1.2
3,883,506	+				-0.9
3,883,506	+				-0.2
3,883,506	+				-1.6
3,883,588	-				+0.2
3,883,812	+		DDA3937_RS17055	0.24	+0.7
3,883,812	+		DDA3937_RS17055	0.24	-1.7
3,883,812	+		DDA3937_RS17055	0.24	-0.5
3,883,812	+		DDA3937_RS17055	0.24	-1.9
3,883,812	+		DDA3937_RS17055	0.24	+2.3
3,883,812	+		DDA3937_RS17055	0.24	-2.2
3,883,812	+		DDA3937_RS17055	0.24	-0.8
3,883,812	+		DDA3937_RS17055	0.24	-1.5
3,883,813	-		DDA3937_RS17055	0.24	-0.9
3,883,813	-		DDA3937_RS17055	0.24	-1.4
3,883,813	-		DDA3937_RS17055	0.24	-2.2
3,883,813	-		DDA3937_RS17055	0.24	-2.2
3,883,813	-		DDA3937_RS17055	0.24	-0.1
3,883,813	-		DDA3937_RS17055	0.24	-1.5
3,883,813	-		DDA3937_RS17055	0.24	+0.2
3,883,816	+		DDA3937_RS17055	0.24	-1.2
3,883,816	+		DDA3937_RS17055	0.24	-0.3
3,883,816	+		DDA3937_RS17055	0.24	+0.8
3,883,846	+		DDA3937_RS17055	0.26	-0.8
3,883,867	+		DDA3937_RS17055	0.28	-1.7
3,884,013	+		DDA3937_RS17055	0.38	+0.8
3,884,014	-		DDA3937_RS17055	0.39	-1.7
3,884,014	-		DDA3937_RS17055	0.39	+0.7
3,884,014	-		DDA3937_RS17055	0.39	-0.4
3,884,014	-		DDA3937_RS17055	0.39	-1.6
3,884,014	-				+0.1
3,884,032	+		DDA3937_RS17055	0.40	-0.1
3,884,040	+		DDA3937_RS17055	0.40	+0.7
3,884,040	+		DDA3937_RS17055	0.40	-0.2
3,884,040	+		DDA3937_RS17055	0.40	-1.3
3,884,041	-				+1.7
3,884,061	+		DDA3937_RS17055	0.42	+0.3
3,884,062	-		DDA3937_RS17055	0.42	-1.5
3,884,074	-		DDA3937_RS17055	0.43	-0.6
3,884,102	+		DDA3937_RS17055	0.45	-0.3
3,884,102	+		DDA3937_RS17055	0.45	+0.3
3,884,103	-		DDA3937_RS17055	0.45	+0.3
3,884,196	+		DDA3937_RS17055	0.52	+1.0
3,884,196	+		DDA3937_RS17055	0.52	+0.6
3,884,196	+		DDA3937_RS17055	0.52	-0.7
3,884,196	+		DDA3937_RS17055	0.52	-2.8
3,884,196	+		DDA3937_RS17055	0.52	+0.4
3,884,197	-		DDA3937_RS17055	0.52	-0.4
3,884,197	-		DDA3937_RS17055	0.52	-1.1
3,884,197	-		DDA3937_RS17055	0.52	+0.4
3,884,300	+		DDA3937_RS17055	0.60	+0.1
3,884,300	+		DDA3937_RS17055	0.60	-0.5
3,884,300	+		DDA3937_RS17055	0.60	+0.4
3,884,301	-				-0.2
3,884,301	-		DDA3937_RS17055	0.60	+0.3
3,884,301	-		DDA3937_RS17055	0.60	-0.9
3,884,301	-		DDA3937_RS17055	0.60	+0.7
3,884,354	+		DDA3937_RS17055	0.64	+2.4
3,884,354	+		DDA3937_RS17055	0.64	-0.7
3,884,381	-		DDA3937_RS17055	0.66	+1.4
3,884,381	-		DDA3937_RS17055	0.66	-0.5
3,884,381	-		DDA3937_RS17055	0.66	-0.5
3,884,381	-		DDA3937_RS17055	0.66	-2.1
3,884,387	-		DDA3937_RS17055	0.66	+0.2
3,884,430	-		DDA3937_RS17055	0.69	-1.0
3,884,430	-		DDA3937_RS17055	0.69	+0.7
3,884,430	-		DDA3937_RS17055	0.69	+0.0
3,884,443	+		DDA3937_RS17055	0.70	-1.6
3,884,443	+		DDA3937_RS17055	0.70	+0.3