Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS17895

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
4,080,047	+				-0.6
4,080,047	+				-0.3
4,080,047	+				-0.5
4,080,047	+				-1.1
4,080,047	+				-1.7
4,080,047	+				-0.1
4,080,140	+		DDA3937_RS17890	0.18	-1.2
4,080,140	+		DDA3937_RS17890	0.18	-0.7
4,080,140	+		DDA3937_RS17890	0.18	-1.1
4,080,140	+		DDA3937_RS17890	0.18	+0.4
4,080,140	+		DDA3937_RS17890	0.18	+0.8
4,080,141	-		DDA3937_RS17890	0.18	+3.0
4,080,141	-		DDA3937_RS17890	0.18	+0.4
4,080,287	+		DDA3937_RS17890	0.35	-1.5
4,080,399	+		DDA3937_RS17890	0.48	+0.4
4,080,410	-		DDA3937_RS17890	0.50	-0.0
4,080,451	+		DDA3937_RS17890	0.54	-1.3
4,080,617	-		DDA3937_RS17890	0.74	-0.2
4,080,617	-		DDA3937_RS17890	0.74	-0.2
4,080,617	-		DDA3937_RS17890	0.74	+1.7
4,080,617	-		DDA3937_RS17890	0.74	-0.6
4,080,701	-		DDA3937_RS17890	0.84	-0.5
4,080,701	-		DDA3937_RS17890	0.84	-1.8
4,080,721	+		DDA3937_RS17890	0.86	-0.2
4,080,721	+		DDA3937_RS17890	0.86	+0.1
4,080,722	-		DDA3937_RS17890	0.86	+0.0
4,080,722	-		DDA3937_RS17890	0.86	-0.7
4,080,722	-		DDA3937_RS17890	0.86	-0.8
4,080,722	-		DDA3937_RS17890	0.86	-0.8
4,080,722	-		DDA3937_RS17890	0.86	-0.9
4,080,781	+				+0.0
4,080,835	+				-0.6
4,080,835	+				+0.7
4,080,835	+				-1.4
4,080,835	+				+2.7
4,080,835	+				+1.7
4,080,835	+				-0.3
4,080,835	+				-0.2
4,080,835	+				+0.8
4,080,836	-				-1.1
4,080,836	-				+1.5
4,080,836	-				+0.5
4,080,836	-				-0.0
4,080,836	-				+0.1
4,080,836	-				+0.4
4,080,839	+				+0.3
4,080,839	+				-2.5
4,080,839	+				-0.3
4,080,839	+				-0.5
4,080,839	+				+0.3
4,080,840	-				-0.7
4,080,840	-				-0.6
4,080,840	-				-3.1
4,080,910	+				-1.1
4,080,934	+				+0.6
4,080,934	+				-1.5
4,080,934	+				-1.4
4,080,935	-				-0.2
4,080,935	-				+5.6
4,080,935	-				-1.2
4,080,935	-				+0.6
4,080,935	-				+0.4
4,080,958	+				-0.2
4,080,958	+				-0.9
4,080,958	+				-0.7
4,080,986	+				-0.6
4,080,987	-				-0.3
4,081,019	+				-1.5
4,081,019	+				+3.7
4,081,019	+				-0.3
4,081,020	-				+0.7
4,081,020	-				-0.3
4,081,111	+				+1.0
4,081,111	+				-1.5
4,081,111	+				-0.4
4,081,111	+				+1.0
4,081,111	+				-0.4
4,081,111	+				+1.0
4,081,111	+				-1.4
4,081,111	+				+0.9
4,081,111	+				+0.1
4,081,112	-				+1.3
4,081,112	-				-0.4
4,081,112	-				-0.5
4,081,112	-				-0.5
4,081,112	-				-0.2
4,081,112	-				+1.5
4,081,187	-		DDA3937_RS17895	0.12	-1.6
4,081,192	+		DDA3937_RS17895	0.12	+1.1
4,081,192	+		DDA3937_RS17895	0.12	-0.6
4,081,192	+		DDA3937_RS17895	0.12	-2.6
4,081,193	-		DDA3937_RS17895	0.12	+0.0
4,081,193	-		DDA3937_RS17895	0.12	+0.7
4,081,193	-		DDA3937_RS17895	0.12	-0.1
4,081,193	-		DDA3937_RS17895	0.12	+0.6
4,081,266	+		DDA3937_RS17895	0.16	+3.5
4,081,266	+		DDA3937_RS17895	0.16	-0.3
4,081,267	-		DDA3937_RS17895	0.16	+0.3
4,081,284	-		DDA3937_RS17895	0.16	-0.3
4,081,307	+		DDA3937_RS17895	0.18	-0.9
4,081,308	-		DDA3937_RS17895	0.18	-0.1
4,081,335	+		DDA3937_RS17895	0.19	+1.0
4,081,335	+		DDA3937_RS17895	0.19	+1.0
4,081,336	-		DDA3937_RS17895	0.19	+1.0
4,081,336	-		DDA3937_RS17895	0.19	-1.1
4,081,336	-		DDA3937_RS17895	0.19	-0.7
4,081,336	-		DDA3937_RS17895	0.19	+0.7
4,081,336	-		DDA3937_RS17895	0.19	-0.2
4,081,349	+		DDA3937_RS17895	0.19	-0.7
4,081,349	+		DDA3937_RS17895	0.19	-0.7
4,081,349	+		DDA3937_RS17895	0.19	+0.8
4,081,349	+		DDA3937_RS17895	0.19	+0.0
4,081,349	+		DDA3937_RS17895	0.19	-1.3
4,081,350	-		DDA3937_RS17895	0.19	+0.4
4,081,442	-		DDA3937_RS17895	0.23	+4.4
4,081,499	+		DDA3937_RS17895	0.26	-0.5
4,081,499	+		DDA3937_RS17895	0.26	+1.7
4,081,500	-		DDA3937_RS17895	0.26	-1.1
4,081,507	+		DDA3937_RS17895	0.26	-1.0
4,081,522	+		DDA3937_RS17895	0.27	-0.9
4,081,523	-		DDA3937_RS17895	0.27	-0.4
4,081,523	-		DDA3937_RS17895	0.27	-0.0
4,081,523	-		DDA3937_RS17895	0.27	-0.0
4,081,528	-		DDA3937_RS17895	0.27	-1.6
4,081,618	+		DDA3937_RS17895	0.31	-0.5
4,081,619	-		DDA3937_RS17895	0.31	-0.9
4,081,626	-		DDA3937_RS17895	0.32	-1.7
4,081,626	-		DDA3937_RS17895	0.32	+1.5
4,081,648	+		DDA3937_RS17895	0.32	+1.2
4,081,649	-		DDA3937_RS17895	0.33	+2.2
4,081,649	-		DDA3937_RS17895	0.33	-2.0
4,081,669	+		DDA3937_RS17895	0.33	-0.1
4,081,676	+		DDA3937_RS17895	0.34	-1.3
4,081,676	+		DDA3937_RS17895	0.34	-0.7
4,081,676	+		DDA3937_RS17895	0.34	-1.3
4,081,677	-		DDA3937_RS17895	0.34	-0.4
4,081,677	-		DDA3937_RS17895	0.34	-0.1
4,081,677	-		DDA3937_RS17895	0.34	-0.8
4,081,677	-		DDA3937_RS17895	0.34	-0.2
4,081,677	-		DDA3937_RS17895	0.34	+0.6
4,081,677	-		DDA3937_RS17895	0.34	-1.0
4,081,677	-		DDA3937_RS17895	0.34	-0.9
4,081,677	-		DDA3937_RS17895	0.34	-0.0
4,081,678	+		DDA3937_RS17895	0.34	+0.6
4,081,678	+		DDA3937_RS17895	0.34	-1.5
4,081,678	+		DDA3937_RS17895	0.34	-1.1
4,081,678	+		DDA3937_RS17895	0.34	+2.6
4,081,678	+		DDA3937_RS17895	0.34	-0.3
4,081,678	+		DDA3937_RS17895	0.34	-0.1
4,081,678	+		DDA3937_RS17895	0.34	-2.4
4,081,678	+		DDA3937_RS17895	0.34	-1.4
4,081,678	+		DDA3937_RS17895	0.34	-0.1
4,081,678	+		DDA3937_RS17895	0.34	+0.9
4,081,678	+		DDA3937_RS17895	0.34	-0.9
4,081,678	+		DDA3937_RS17895	0.34	+0.1
4,081,679	-		DDA3937_RS17895	0.34	-0.5
4,081,679	-		DDA3937_RS17895	0.34	-2.2
4,081,679	-		DDA3937_RS17895	0.34	-0.5
4,081,679	-		DDA3937_RS17895	0.34	-0.8
4,081,679	-		DDA3937_RS17895	0.34	-0.9
4,081,679	-		DDA3937_RS17895	0.34	-2.4
4,081,679	-		DDA3937_RS17895	0.34	-1.4
4,081,679	-		DDA3937_RS17895	0.34	-0.9
4,081,679	-		DDA3937_RS17895	0.34	-1.7
4,081,679	-		DDA3937_RS17895	0.34	-0.9
4,081,698	+		DDA3937_RS17895	0.35	-1.7
4,081,698	+		DDA3937_RS17895	0.35	-0.6
4,081,698	+		DDA3937_RS17895	0.35	-0.7
4,081,698	+		DDA3937_RS17895	0.35	-0.3
4,081,698	+		DDA3937_RS17895	0.35	-2.0
4,081,699	-		DDA3937_RS17895	0.35	-1.4
4,081,699	-		DDA3937_RS17895	0.35	-0.6
4,081,699	-		DDA3937_RS17895	0.35	-2.4
4,081,699	-		DDA3937_RS17895	0.35	-1.1
4,081,699	-		DDA3937_RS17895	0.35	-1.2
4,081,699	-		DDA3937_RS17895	0.35	+0.4
4,081,699	-		DDA3937_RS17895	0.35	-0.5
4,081,715	-		DDA3937_RS17895	0.35	-1.4
4,081,715	-		DDA3937_RS17895	0.35	+1.3
4,081,715	-		DDA3937_RS17895	0.35	-0.3
4,081,862	+		DDA3937_RS17895	0.42	-1.2
4,081,863	-		DDA3937_RS17895	0.42	-0.2
4,081,886	+		DDA3937_RS17895	0.43	-0.4
4,081,887	-		DDA3937_RS17895	0.43	-0.3
4,081,908	-		DDA3937_RS17895	0.44	-0.9
4,081,922	+		DDA3937_RS17895	0.45	+1.1
4,081,922	+		DDA3937_RS17895	0.45	-0.4
4,081,922	+		DDA3937_RS17895	0.45	-0.6
4,081,923	-		DDA3937_RS17895	0.45	+0.3
4,081,923	-		DDA3937_RS17895	0.45	-0.9
4,081,923	-		DDA3937_RS17895	0.45	+0.2
4,081,924	+		DDA3937_RS17895	0.45	-1.6
4,081,924	+		DDA3937_RS17895	0.45	-0.8
4,081,924	+		DDA3937_RS17895	0.45	+0.4
4,081,924	+		DDA3937_RS17895	0.45	-0.7
4,081,957	+		DDA3937_RS17895	0.46	-0.3
4,081,958	-		DDA3937_RS17895	0.46	-0.3
4,081,964	+		DDA3937_RS17895	0.46	-1.6
4,081,965	-		DDA3937_RS17895	0.46	-0.5
4,081,965	-		DDA3937_RS17895	0.46	+0.1
4,082,029	+		DDA3937_RS17895	0.49	-0.1
4,082,092	+		DDA3937_RS17895	0.52	-1.2
4,082,092	+		DDA3937_RS17895	0.52	-0.4
4,082,093	-		DDA3937_RS17895	0.52	-0.4
4,082,171	-		DDA3937_RS17895	0.55	+0.2
4,082,179	+		DDA3937_RS17895	0.56	+0.1
4,082,180	-		DDA3937_RS17895	0.56	-0.3
4,082,180	-		DDA3937_RS17895	0.56	-0.6
4,082,180	-		DDA3937_RS17895	0.56	-1.0
4,082,180	-		DDA3937_RS17895	0.56	+4.8
4,082,180	-		DDA3937_RS17895	0.56	+0.5
4,082,230	+		DDA3937_RS17895	0.58	-0.9
4,082,230	+		DDA3937_RS17895	0.58	-0.0
4,082,230	+		DDA3937_RS17895	0.58	+0.3
4,082,230	+		DDA3937_RS17895	0.58	+0.1
4,082,230	+		DDA3937_RS17895	0.58	-1.1
4,082,231	-		DDA3937_RS17895	0.58	+1.7
4,082,231	-		DDA3937_RS17895	0.58	-1.6
4,082,242	+		DDA3937_RS17895	0.59	-0.4
4,082,242	+		DDA3937_RS17895	0.59	+1.6
4,082,242	+		DDA3937_RS17895	0.59	-1.2
4,082,266	+		DDA3937_RS17895	0.60	-1.1
4,082,266	+		DDA3937_RS17895	0.60	-0.4
4,082,267	-		DDA3937_RS17895	0.60	-1.2
4,082,267	-		DDA3937_RS17895	0.60	-0.5
4,082,281	+		DDA3937_RS17895	0.60	-2.6
4,082,281	+		DDA3937_RS17895	0.60	-0.4
4,082,282	-		DDA3937_RS17895	0.60	-1.2
4,082,282	-		DDA3937_RS17895	0.60	+0.8
4,082,282	-		DDA3937_RS17895	0.60	-3.0
4,082,282	-		DDA3937_RS17895	0.60	-0.3
4,082,282	-		DDA3937_RS17895	0.60	+2.7
4,082,282	-		DDA3937_RS17895	0.60	+0.1
4,082,288	+		DDA3937_RS17895	0.61	-0.1
4,082,288	+		DDA3937_RS17895	0.61	+0.1
4,082,289	-		DDA3937_RS17895	0.61	+2.1
4,082,289	-		DDA3937_RS17895	0.61	-0.7
4,082,317	+		DDA3937_RS17895	0.62	+0.1
4,082,317	+		DDA3937_RS17895	0.62	-1.0
4,082,317	+		DDA3937_RS17895	0.62	+0.7
4,082,317	+		DDA3937_RS17895	0.62	-0.9
4,082,318	-		DDA3937_RS17895	0.62	+2.1
4,082,318	-		DDA3937_RS17895	0.62	-0.6
4,082,321	+		DDA3937_RS17895	0.62	-0.1
4,082,321	+		DDA3937_RS17895	0.62	+0.3
4,082,322	-		DDA3937_RS17895	0.62	-0.3
4,082,322	-		DDA3937_RS17895	0.62	-0.9
4,082,322	-		DDA3937_RS17895	0.62	-1.3
4,082,322	-		DDA3937_RS17895	0.62	-0.0
4,082,322	-		DDA3937_RS17895	0.62	-0.7
4,082,322	-		DDA3937_RS17895	0.62	+0.8
4,082,399	+		DDA3937_RS17895	0.66	-0.3
4,082,399	+		DDA3937_RS17895	0.66	-1.1
4,082,399	+		DDA3937_RS17895	0.66	-1.1
4,082,399	+		DDA3937_RS17895	0.66	-0.4
4,082,399	+		DDA3937_RS17895	0.66	-2.1
4,082,400	-		DDA3937_RS17895	0.66	-1.1
4,082,400	-		DDA3937_RS17895	0.66	-0.9
4,082,446	+		DDA3937_RS17895	0.68	-0.6
4,082,446	+		DDA3937_RS17895	0.68	-0.1
4,082,446	+		DDA3937_RS17895	0.68	-0.3
4,082,446	+		DDA3937_RS17895	0.68	-0.1
4,082,447	-		DDA3937_RS17895	0.68	-0.8
4,082,470	+		DDA3937_RS17895	0.69	-0.8
4,082,470	+		DDA3937_RS17895	0.69	+0.7
4,082,471	-		DDA3937_RS17895	0.69	+2.3
4,082,510	+		DDA3937_RS17895	0.70	-1.7
4,082,510	+		DDA3937_RS17895	0.70	-1.3
4,082,510	+		DDA3937_RS17895	0.70	-0.1
4,082,511	-		DDA3937_RS17895	0.70	-0.2
4,082,597	+		DDA3937_RS17895	0.74	-0.8
4,082,617	+		DDA3937_RS17895	0.75	-0.1
4,082,617	+		DDA3937_RS17895	0.75	-0.1
4,082,617	+		DDA3937_RS17895	0.75	+1.4
4,082,621	+		DDA3937_RS17895	0.75	-0.1
4,082,621	+		DDA3937_RS17895	0.75	-0.3
4,082,621	+		DDA3937_RS17895	0.75	+0.1
4,082,621	+		DDA3937_RS17895	0.75	+1.8
4,082,621	+		DDA3937_RS17895	0.75	-0.3
4,082,622	-		DDA3937_RS17895	0.75	-0.3
4,082,622	-		DDA3937_RS17895	0.75	-1.2
4,082,622	-		DDA3937_RS17895	0.75	-0.6
4,082,630	+		DDA3937_RS17895	0.76	+2.0
4,082,630	+		DDA3937_RS17895	0.76	-0.3
4,082,806	-		DDA3937_RS17895	0.83	+1.4
4,082,806	-		DDA3937_RS17895	0.83	+0.7
4,082,877	-		DDA3937_RS17895	0.87	-0.5
4,082,985	-				-0.4
4,082,985	-				+2.1
4,083,059	+				+0.6
4,083,083	+				+1.1
4,083,084	-				-0.9
4,083,084	-				+0.9
4,083,084	-				+0.7
4,083,084	-				+1.3
4,083,086	+				+0.0
4,083,086	+				+0.3
4,083,086	+				+3.0
4,083,086	+				+0.9
4,083,087	-				-0.4
4,083,087	-				+2.4
4,083,087	-				-0.3
4,083,095	+				+1.7
4,083,095	+				-1.0
4,083,095	+				+0.6
4,083,096	-				-1.7
4,083,096	-				+0.7
4,083,204	+				-0.6
4,083,204	+				-0.3
4,083,226	+				-1.4
4,083,226	+				+1.1
4,083,226	+				-0.4
4,083,227	-				+0.0
4,083,240	+				-0.5
4,083,241	-				+0.1
4,083,246	+				-0.7
4,083,247	-				+0.3
4,083,265	+				-0.5
4,083,265	+				-0.2
4,083,266	-				+0.7
4,083,267	+				+0.1
4,083,267	+				-0.6
4,083,267	+				-1.3
4,083,267	+				+0.4
4,083,268	-				-0.8
4,083,268	-				+2.1
4,083,268	-				-0.3
4,083,268	-				+0.0
4,083,268	-				+1.7
4,083,294	+				+0.5
4,083,363	+				+0.7
4,083,363	+				-2.7
4,083,363	+				+0.2
4,083,364	-				-0.5
4,083,364	-				+1.2
4,083,365	+				-1.2
4,083,377	+				-0.3
4,083,408	+				-0.4
4,083,408	+				-0.6
4,083,408	+				-0.9
4,083,418	+				-0.2
4,083,418	+				-0.7
4,083,419	-				-0.6
4,083,419	-				-0.4
4,083,419	-				-1.1
4,083,419	-				-0.6
4,083,438	+				+2.9
4,083,439	-				-1.6
4,083,466	+				-0.8
4,083,467	-				-1.6
4,083,467	-				+0.0
4,083,467	-				-0.1
4,083,468	+				+0.2
4,083,469	-				+1.3
4,083,481	-				+3.3
4,083,512	-				-2.4
4,083,615	+		DDA3937_RS17900	0.18	-0.2
4,083,616	-		DDA3937_RS17900	0.19	+0.3
4,083,696	+		DDA3937_RS17900	0.27	+0.1
4,083,697	-		DDA3937_RS17900	0.27	+0.1
4,083,697	-		DDA3937_RS17900	0.27	-1.4
4,083,703	+		DDA3937_RS17900	0.27	-0.8
4,083,703	+		DDA3937_RS17900	0.27	+1.2
4,083,704	-		DDA3937_RS17900	0.27	-1.3
4,083,704	-		DDA3937_RS17900	0.27	+0.3
4,083,704	-		DDA3937_RS17900	0.27	+0.9
4,083,785	-		DDA3937_RS17900	0.36	-0.4
4,083,802	+		DDA3937_RS17900	0.37	-2.0
4,083,802	+				+0.1
4,083,886	+		DDA3937_RS17900	0.46	+0.5
4,083,886	+		DDA3937_RS17900	0.46	-0.3
4,083,886	+		DDA3937_RS17900	0.46	-1.7
4,083,887	-		DDA3937_RS17900	0.46	-1.0
4,083,887	-		DDA3937_RS17900	0.46	-0.3
4,084,074	+		DDA3937_RS17900	0.65	-0.1