Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS10585

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
2,380,584	-				-0.2
2,380,584	-				-1.3
2,380,584	-				+1.3
2,380,584	-				+1.4
2,380,626	+				-0.3
2,380,626	+				-2.0
2,380,627	-				-1.0
2,380,627	-				-0.4
2,380,627	-				-1.3
2,380,636	-				+0.2
2,380,642	-				+0.3
2,380,642	-				-0.0
2,380,672	-				-1.0
2,380,678	+				-1.1
2,380,678	+				+1.0
2,380,693	+				-2.5
2,380,693	+				-0.3
2,380,693	+				+0.0
2,380,694	-				-0.3
2,380,694	-				+1.0
2,380,701	+				+0.3
2,380,703	+				-0.6
2,380,704	-				-1.5
2,380,704	-				-0.6
2,380,718	+				-0.1
2,380,797	+				+2.3
2,380,800	+				-3.1
2,380,800	+				-0.1
2,380,801	-				+0.3
2,380,801	-				-0.7
2,380,801	-				+1.3
2,380,801	-				-0.9
2,380,823	+				-2.4
2,380,824	-				-1.4
2,380,824	-				+4.0
2,380,942	+		DDA3937_RS10580	0.45	-0.7
2,380,942	+		DDA3937_RS10580	0.45	+2.0
2,380,946	+		DDA3937_RS10580	0.47	-2.5
2,380,946	+		DDA3937_RS10580	0.47	-0.5
2,380,947	-		DDA3937_RS10580	0.47	+0.8
2,380,947	-		DDA3937_RS10580	0.47	+0.9
2,381,019	-		DDA3937_RS10580	0.81	-2.0
2,381,050	+				+0.5
2,381,071	+				+0.7
2,381,149	+				+0.7
2,381,149	+				-1.2
2,381,149	+				-0.8
2,381,152	-				+0.6
2,381,154	+				-0.4
2,381,178	-				+0.9
2,381,318	-				-0.3
2,381,385	+				-1.0
2,381,388	+				-0.8
2,381,416	-				+2.8
2,381,473	+				-1.0
2,381,502	+				+0.9
2,381,502	+				-0.6
2,381,503	-				+0.7
2,381,507	+				-0.9
2,381,507	+				-0.7
2,381,508	-				-0.1
2,381,583	-				+0.1
2,381,583	-				-2.0
2,381,583	-				+2.6
2,381,585	+				+0.3
2,381,585	+				-0.4
2,381,586	-				+0.8
2,381,609	+				-0.6
2,381,610	-				-0.1
2,381,610	-				+0.8
2,381,613	-				+0.5
2,381,702	+				+0.1
2,381,703	-				-0.3
2,381,715	-				-0.3
2,381,736	+		DDA3937_RS10585	0.10	+0.5
2,381,745	+		DDA3937_RS10585	0.11	-2.6
2,381,746	-				-0.7
2,381,987	+		DDA3937_RS10585	0.27	-0.7
2,381,987	+		DDA3937_RS10585	0.27	-1.5
2,381,987	+		DDA3937_RS10585	0.27	+0.4
2,381,987	+		DDA3937_RS10585	0.27	-0.5
2,381,987	+		DDA3937_RS10585	0.27	+1.5
2,381,987	+		DDA3937_RS10585	0.27	-0.6
2,381,988	-		DDA3937_RS10585	0.27	+1.0
2,381,988	-		DDA3937_RS10585	0.27	-0.7
2,382,045	+		DDA3937_RS10585	0.30	+0.9
2,382,046	-		DDA3937_RS10585	0.31	+0.5
2,382,046	-		DDA3937_RS10585	0.31	+0.1
2,382,086	+		DDA3937_RS10585	0.33	-0.6
2,382,087	-		DDA3937_RS10585	0.33	+0.7
2,382,092	+		DDA3937_RS10585	0.34	+1.2
2,382,092	+		DDA3937_RS10585	0.34	-0.7
2,382,093	-		DDA3937_RS10585	0.34	+1.6
2,382,093	-		DDA3937_RS10585	0.34	+0.8
2,382,093	-		DDA3937_RS10585	0.34	+0.4
2,382,093	-		DDA3937_RS10585	0.34	+1.6
2,382,093	-		DDA3937_RS10585	0.34	+2.2
2,382,093	-		DDA3937_RS10585	0.34	-0.4
2,382,093	-		DDA3937_RS10585	0.34	-0.9
2,382,093	-		DDA3937_RS10585	0.34	-0.5
2,382,093	-		DDA3937_RS10585	0.34	-0.8
2,382,093	-		DDA3937_RS10585	0.34	+0.3
2,382,146	-		DDA3937_RS10585	0.37	+0.3
2,382,280	-				-0.3
2,382,386	+		DDA3937_RS10585	0.53	-0.1
2,382,386	+		DDA3937_RS10585	0.53	-1.1
2,382,386	+		DDA3937_RS10585	0.53	+0.1
2,382,387	-		DDA3937_RS10585	0.53	+1.3
2,382,387	-		DDA3937_RS10585	0.53	-0.3
2,382,387	-		DDA3937_RS10585	0.53	+0.3
2,382,414	+		DDA3937_RS10585	0.55	+1.4
2,382,415	-		DDA3937_RS10585	0.55	-0.4
2,382,735	+		DDA3937_RS10585	0.76	-0.5
2,382,735	+		DDA3937_RS10585	0.76	+0.1
2,382,735	+		DDA3937_RS10585	0.76	+2.1
2,382,735	+		DDA3937_RS10585	0.76	-1.0
2,382,735	+		DDA3937_RS10585	0.76	+4.2
2,382,852	+		DDA3937_RS10585	0.84	-0.1
2,382,852	+		DDA3937_RS10585	0.84	+0.3
2,382,853	-		DDA3937_RS10585	0.84	+0.0
2,382,853	-		DDA3937_RS10585	0.84	+0.5
2,382,876	+		DDA3937_RS10585	0.85	+0.5
2,382,877	-		DDA3937_RS10585	0.86	+0.8
2,382,890	+		DDA3937_RS10585	0.86	+1.1
2,382,891	-		DDA3937_RS10585	0.86	-1.0
2,382,945	+				+0.5
2,382,946	-				-0.7
2,382,946	-				-0.0
2,382,949	+				+1.8
2,382,950	-				+0.7
2,383,040	+				-0.3
2,383,084	-				+1.3
2,383,127	+				+0.2
2,383,127	+				+0.2
2,383,127	+				-0.7
2,383,127	+				+0.9
2,383,128	-				+0.1
2,383,128	-				+0.3
2,383,128	-				+0.5
2,383,128	-				-0.3
2,383,128	-				-0.5
2,383,178	+				-0.0
2,383,179	-				+4.2
2,383,179	-				-0.2
2,383,220	+				+0.6
2,383,221	-				+0.3
2,383,221	-				+0.1
2,383,266	+				-1.1
2,383,267	-				+1.3
2,383,267	-				+0.9
2,383,287	+				+0.4
2,383,287	+				-0.6
2,383,287	+				-0.3
2,383,802	+		DDA3937_RS10590	0.39	+0.4
2,383,802	+		DDA3937_RS10590	0.39	-0.2
2,383,802	+		DDA3937_RS10590	0.39	+0.7
2,383,802	+		DDA3937_RS10590	0.39	+0.7
2,383,802	+		DDA3937_RS10590	0.39	+1.6
2,383,803	-		DDA3937_RS10590	0.39	+0.3
2,383,803	-		DDA3937_RS10590	0.39	+1.2
2,383,803	-		DDA3937_RS10590	0.39	+1.5
2,383,803	-		DDA3937_RS10590	0.39	-0.2
2,383,803	-		DDA3937_RS10590	0.39	+0.4
2,383,803	-		DDA3937_RS10590	0.39	-0.3
2,383,803	-		DDA3937_RS10590	0.39	-1.1
2,383,844	+		DDA3937_RS10590	0.41	+0.5
2,383,845	-		DDA3937_RS10590	0.41	+0.6
2,383,845	-		DDA3937_RS10590	0.41	+0.0
2,383,945	-		DDA3937_RS10590	0.47	-0.3
2,383,967	+		DDA3937_RS10590	0.48	+0.3
2,383,968	-		DDA3937_RS10590	0.49	+0.5
2,384,042	-		DDA3937_RS10590	0.53	+0.8