Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS07710

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
1,737,688	+		DDA3937_RS07705	0.80	-0.1
1,737,723	+		DDA3937_RS07705	0.81	-1.8
1,737,723	+		DDA3937_RS07705	0.81	-0.2
1,737,724	-		DDA3937_RS07705	0.81	-0.9
1,737,751	+		DDA3937_RS07705	0.82	+0.2
1,737,751	+		DDA3937_RS07705	0.82	-0.3
1,737,753	+		DDA3937_RS07705	0.83	-1.8
1,737,753	+		DDA3937_RS07705	0.83	-2.6
1,737,753	+		DDA3937_RS07705	0.83	+0.4
1,737,753	+		DDA3937_RS07705	0.83	-2.4
1,737,753	+		DDA3937_RS07705	0.83	+0.3
1,737,753	+		DDA3937_RS07705	0.83	-0.4
1,737,753	+		DDA3937_RS07705	0.83	-1.4
1,737,753	+		DDA3937_RS07705	0.83	-0.2
1,737,754	-		DDA3937_RS07705	0.83	+1.0
1,737,754	-		DDA3937_RS07705	0.83	-0.3
1,737,754	-		DDA3937_RS07705	0.83	+1.4
1,737,755	+		DDA3937_RS07705	0.83	-1.2
1,737,755	+		DDA3937_RS07705	0.83	-1.5
1,737,755	+		DDA3937_RS07705	0.83	-1.8
1,737,755	+		DDA3937_RS07705	0.83	-0.8
1,737,755	+		DDA3937_RS07705	0.83	+0.1
1,737,755	+		DDA3937_RS07705	0.83	-0.2
1,737,755	+		DDA3937_RS07705	0.83	-0.9
1,737,756	-		DDA3937_RS07705	0.83	-1.4
1,737,756	-		DDA3937_RS07705	0.83	-0.7
1,737,756	-		DDA3937_RS07705	0.83	-1.8
1,737,808	+		DDA3937_RS07705	0.85	+0.2
1,737,808	+		DDA3937_RS07705	0.85	-0.7
1,737,808	+		DDA3937_RS07705	0.85	-1.0
1,737,809	-				+1.8
1,737,814	-		DDA3937_RS07705	0.85	-1.6
1,737,814	-		DDA3937_RS07705	0.85	+0.1
1,737,824	-		DDA3937_RS07705	0.86	-0.6
1,737,824	-		DDA3937_RS07705	0.86	-0.6
1,737,858	+		DDA3937_RS07705	0.87	+1.9
1,737,859	-		DDA3937_RS07705	0.87	+1.3
1,737,884	+		DDA3937_RS07705	0.88	+0.5
1,737,927	+				+0.0
1,737,927	+				+0.2
1,737,927	+				-1.0
1,737,927	+				+1.0
1,737,928	-				-1.3
1,737,948	+				-0.2
1,737,948	+				+0.7
1,737,949	-				-0.5
1,737,949	-				-0.1
1,737,949	-				-0.2
1,737,949	-				+0.1
1,737,949	-				-0.4
1,737,949	-				+1.4
1,737,969	+				+1.1
1,737,969	+				+4.7
1,737,970	-				-0.1
1,737,973	+				-1.9
1,737,974	-				-1.7
1,738,077	+				-0.8
1,738,078	-				-0.9
1,738,158	+				-0.7
1,738,159	-				+0.2
1,738,159	-				-0.6
1,738,172	+				-1.0
1,738,173	-				-0.8
1,738,173	-				-0.6
1,738,192	+				-0.2
1,738,281	+				-2.8
1,738,340	-				-0.9
1,738,417	-				-0.2
1,738,496	+				-0.2
1,738,496	+				-0.8
1,738,496	+				-0.4
1,738,520	-				-1.6
1,738,528	+				-0.8
1,738,528	+				+1.0
1,738,559	-				+1.2
1,738,559	-				-0.5
1,738,571	+				-1.8
1,738,571	+				-0.3
1,738,571	+				-0.7
1,738,571	+				-0.8
1,738,571	+				-0.2
1,738,572	-				-3.1
1,738,572	-				-0.2
1,738,576	-				+0.9
1,738,605	-				+0.1
1,738,697	+				-2.2
1,738,731	+				-0.4
1,738,731	+				+1.4
1,738,732	-				+1.1
1,738,732	-				+2.3
1,738,732	-				+1.4
1,738,735	+				+0.7
1,738,735	+				+0.4
1,738,735	+				-1.4
1,738,735	+				-2.2
1,738,736	-				+0.1
1,738,736	-				+1.4
1,738,739	+				+2.1
1,738,739	+				-1.3
1,738,916	-		DDA3937_RS07710	0.20	-0.3
1,739,046	+		DDA3937_RS07710	0.29	-0.4
1,739,047	-		DDA3937_RS07710	0.29	-1.2
1,739,063	+		DDA3937_RS07710	0.30	+0.8
1,739,143	+		DDA3937_RS07710	0.36	+1.7
1,739,143	+		DDA3937_RS07710	0.36	-0.1
1,739,198	+		DDA3937_RS07710	0.40	-1.4
1,739,247	+		DDA3937_RS07710	0.44	+0.1
1,739,264	+		DDA3937_RS07710	0.45	-0.4
1,739,265	-		DDA3937_RS07710	0.45	+0.2
1,739,265	-		DDA3937_RS07710	0.45	-0.7
1,739,278	+		DDA3937_RS07710	0.46	+0.8
1,739,278	+		DDA3937_RS07710	0.46	-1.1
1,739,299	+		DDA3937_RS07710	0.48	+0.1
1,739,544	+		DDA3937_RS07710	0.65	+1.3
1,739,596	+		DDA3937_RS07710	0.69	-0.2
1,739,596	+		DDA3937_RS07710	0.69	+0.8
1,739,649	+		DDA3937_RS07710	0.73	-0.6
1,739,714	-		DDA3937_RS07710	0.78	-0.9
1,739,938	+				-1.0
1,739,938	+				-1.5
1,739,938	+				+0.1
1,739,939	-				-0.1
1,740,032	+				+0.3
1,740,036	+				-0.8
1,740,037	-				+1.8
1,740,038	+				-1.0
1,740,038	+				+2.0
1,740,067	+				+1.0
1,740,104	+				+0.9
1,740,122	+				-0.2
1,740,123	-				-1.6
1,740,126	-				+1.7
1,740,126	-				-0.3
1,740,128	+				-0.8
1,740,137	-				-1.4
1,740,212	+				+0.9
1,740,212	+				-1.1
1,740,259	+				+0.2
1,740,349	+				-0.6
1,740,382	+				+1.0
1,740,403	-				-0.6
1,740,403	-				-0.9
1,740,405	+				+0.2
1,740,414	+		DDA3937_RS07715	0.10	-0.8
1,740,414	+				-0.9
1,740,415	-		DDA3937_RS07715	0.10	-1.2
1,740,547	+		DDA3937_RS07715	0.17	-2.2
1,740,547	+		DDA3937_RS07715	0.17	-0.2
1,740,547	+		DDA3937_RS07715	0.17	-0.9
1,740,548	-		DDA3937_RS07715	0.17	+0.7
1,740,548	-		DDA3937_RS07715	0.17	-1.4
1,740,637	+		DDA3937_RS07715	0.21	+0.7
1,740,637	+		DDA3937_RS07715	0.21	-0.8
1,740,637	+		DDA3937_RS07715	0.21	+1.4
1,740,638	-		DDA3937_RS07715	0.21	-1.2
1,740,638	-				+3.7
1,740,638	-				-0.6
1,740,638	-		DDA3937_RS07715	0.21	-0.4
1,740,640	+		DDA3937_RS07715	0.21	-0.5
1,740,640	+		DDA3937_RS07715	0.21	-0.3
1,740,640	+		DDA3937_RS07715	0.21	-0.9
1,740,641	-		DDA3937_RS07715	0.21	-0.1
1,740,731	+		DDA3937_RS07715	0.25	-0.2
1,740,731	+		DDA3937_RS07715	0.25	+0.2
1,740,744	-		DDA3937_RS07715	0.26	+0.5
1,740,744	-		DDA3937_RS07715	0.26	-0.8
1,740,768	-		DDA3937_RS07715	0.27	+1.1
1,740,794	+		DDA3937_RS07715	0.28	-0.6
1,740,794	+		DDA3937_RS07715	0.28	-0.0
1,740,795	-		DDA3937_RS07715	0.28	+0.9
1,740,810	+		DDA3937_RS07715	0.29	+0.1
1,740,847	+		DDA3937_RS07715	0.31	-0.9
1,740,974	+		DDA3937_RS07715	0.37	-1.1
1,740,978	+		DDA3937_RS07715	0.37	-0.2
1,740,979	-		DDA3937_RS07715	0.37	+0.3
1,740,998	-		DDA3937_RS07715	0.38	-0.6
1,740,998	-		DDA3937_RS07715	0.38	-0.9