Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS10355

Experiment: PDB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PDB
2,331,365	+				-1.6
2,331,366	-				-0.1
2,331,395	+				-3.2
2,331,404	+				-1.2
2,331,405	-				-0.2
2,331,406	+				-0.4
2,331,406	+				+0.4
2,331,407	-				-2.4
2,331,413	+				-0.2
2,331,413	+				-0.8
2,331,413	+				-0.7
2,331,413	+				-1.0
2,331,414	-				-1.9
2,331,967	+				+1.4
2,332,056	+				-2.5
2,332,056	+				+1.9
2,332,056	+				+1.7
2,332,057	-				+0.5
2,332,057	-				+2.4
2,332,057	-				-0.7
2,332,059	+				+0.5
2,332,060	-				+0.2
2,332,107	+				-0.9
2,332,139	+				+0.4
2,332,139	+				-1.7
2,332,140	-				-3.0
2,332,140	-				+1.9
2,332,140	-				+0.1
2,332,140	-				-1.2
2,332,140	-				-1.9
2,332,140	-				+1.9
2,332,140	-				+0.8
2,332,140	-				-1.6
2,332,143	+				-0.5
2,332,143	+				-0.7
2,332,143	+				+0.8
2,332,143	+				+2.0
2,332,143	+				-3.1
2,332,143	+				+0.3
2,332,144	-				-0.9
2,332,144	-				-0.1
2,332,144	-				+2.8
2,332,144	-				+1.8
2,332,144	-				-0.2
2,332,144	-				-1.7
2,332,144	-				+0.4
2,332,144	-				+1.1
2,332,144	-				-2.6
2,332,144	-				-2.4
2,332,144	-				-1.2
2,332,146	-				-0.5
2,332,149	-				+1.5
2,332,149	-				-0.4
2,332,149	-				-0.7
2,332,168	-				+3.6
2,332,221	+				+1.2
2,332,221	+				-2.3
2,332,221	+				+0.7
2,332,221	+				+2.0
2,332,221	+				+1.5
2,332,222	-				+2.7
2,332,222	-				+0.4
2,332,222	-				+0.3
2,332,225	+				+1.3
2,332,225	+				+0.4
2,332,225	+				+2.4
2,332,225	+				-0.9
2,332,225	+				+0.5
2,332,225	+				-2.7
2,332,225	+				-0.7
2,332,225	+				-2.1
2,332,226	-				+0.1
2,332,226	-				-1.7
2,332,226	-				-1.3
2,332,226	-				+1.1
2,332,226	-				+0.5
2,332,226	-				-0.4
2,332,230	+				-1.0
2,332,230	+				+0.4
2,332,250	-				+0.8
2,332,250	-				+1.6
2,332,304	-				-2.6
2,332,340	+				+1.5
2,332,340	+				-1.5
2,332,340	+				+3.0
2,332,341	-				-4.1
2,332,341	-				-1.2
2,332,351	+		DDA3937_RS10355	0.12	-1.7
2,332,351	+				-0.7
2,332,352	-		DDA3937_RS10355	0.12	-0.8
2,332,352	-		DDA3937_RS10355	0.12	+0.7
2,332,352	-		DDA3937_RS10355	0.12	+2.9
2,332,352	-		DDA3937_RS10355	0.12	+2.4
2,332,352	-		DDA3937_RS10355	0.12	-0.6
2,332,352	-		DDA3937_RS10355	0.12	-0.3
2,332,353	+		DDA3937_RS10355	0.12	+1.3
2,332,353	+		DDA3937_RS10355	0.12	-1.2
2,332,353	+		DDA3937_RS10355	0.12	-0.4
2,332,353	+		DDA3937_RS10355	0.12	-0.2
2,332,353	+		DDA3937_RS10355	0.12	+0.0
2,332,353	+		DDA3937_RS10355	0.12	+2.4
2,332,354	-		DDA3937_RS10355	0.12	-1.8
2,332,354	-		DDA3937_RS10355	0.12	+0.3
2,332,354	-		DDA3937_RS10355	0.12	-1.7
2,332,354	-		DDA3937_RS10355	0.12	+1.1
2,332,354	-		DDA3937_RS10355	0.12	+1.9
2,332,354	-		DDA3937_RS10355	0.12	+0.1
2,332,354	-		DDA3937_RS10355	0.12	+1.4
2,332,354	-		DDA3937_RS10355	0.12	-4.0
2,332,354	-		DDA3937_RS10355	0.12	-1.9
2,332,354	-		DDA3937_RS10355	0.12	-1.7
2,332,354	-		DDA3937_RS10355	0.12	-1.0
2,332,354	-		DDA3937_RS10355	0.12	+3.7
2,332,357	+		DDA3937_RS10355	0.12	-0.4
2,332,357	+		DDA3937_RS10355	0.12	-0.2
2,332,357	+		DDA3937_RS10355	0.12	+0.3
2,332,400	+		DDA3937_RS10355	0.20	-0.4
2,332,400	+		DDA3937_RS10355	0.20	-3.3
2,332,401	-		DDA3937_RS10355	0.20	-3.0
2,332,401	-		DDA3937_RS10355	0.20	-1.9
2,332,401	-		DDA3937_RS10355	0.20	+0.9
2,332,431	+		DDA3937_RS10355	0.25	-3.0
2,332,432	-		DDA3937_RS10355	0.25	+1.7
2,332,432	-		DDA3937_RS10355	0.25	-0.4
2,332,432	-		DDA3937_RS10355	0.25	+2.5
2,332,464	-		DDA3937_RS10355	0.30	-1.2
2,332,524	+		DDA3937_RS10355	0.40	+0.8
2,332,525	-		DDA3937_RS10355	0.41	+1.8
2,332,538	+		DDA3937_RS10355	0.43	+0.4
2,332,604	+		DDA3937_RS10355	0.54	+2.8
2,332,672	+		DDA3937_RS10355	0.65	+1.6
2,332,672	+		DDA3937_RS10355	0.65	-0.3
2,332,672	+		DDA3937_RS10355	0.65	+1.3
2,332,677	-		DDA3937_RS10355	0.66	-1.4
2,332,677	-		DDA3937_RS10355	0.66	-3.2
2,332,677	-		DDA3937_RS10355	0.66	-2.0
2,332,745	+		DDA3937_RS10355	0.77	+1.8
2,332,745	+		DDA3937_RS10355	0.77	-1.2
2,332,745	+		DDA3937_RS10355	0.77	-1.7
2,332,746	-		DDA3937_RS10355	0.77	-0.7
2,332,816	+		DDA3937_RS10355	0.89	-0.3
2,332,816	+		DDA3937_RS10355	0.89	+0.2
2,332,816	+		DDA3937_RS10355	0.89	-1.9
2,332,817	-		DDA3937_RS10355	0.89	-2.0
2,332,817	-		DDA3937_RS10355	0.89	+2.5
2,332,843	-				+0.8
2,332,843	-				-2.8
2,332,869	-				-0.9
2,332,890	+				+0.1
2,332,890	+				+1.1
2,332,890	+				-2.0
2,332,890	+				+2.7
2,332,890	+				-1.8
2,332,890	+				+1.0
2,332,890	+				+2.6
2,332,890	+				+0.0
2,332,890	+				+1.9
2,332,890	+				+0.6
2,332,891	-				-1.2
2,332,891	-				-1.6
2,332,891	-				+0.0
2,332,891	-				-1.4
2,332,891	-				-1.8
2,332,891	-				-0.6
2,332,891	-				+0.8
2,332,891	-				+2.6
2,332,891	-				-2.4
2,332,891	-				-1.6
2,332,891	-				-1.4
2,332,892	+				-3.2
2,332,894	+				-0.4
2,332,894	+				-1.4
2,332,895	-				+1.4
2,332,895	-				-2.2
2,332,917	+				-0.5
2,332,917	+				-0.7
2,332,918	-				-1.9
2,332,920	+				-0.9
2,332,921	-				+2.3
2,332,931	+				-1.4
2,332,977	+				+1.6
2,332,979	+				-1.7
2,332,979	+				+0.2
2,332,988	+				-0.7
2,332,989	-				-0.4
2,333,098	-				-0.7
2,333,146	-				-1.1
2,333,163	+				-0.7
2,333,228	-				-0.4
2,333,237	+				-1.0
2,333,238	-				-3.3
2,333,241	+				-2.8
2,333,269	+				+1.0
2,333,295	+				-1.7
2,333,295	+				+0.6
2,333,296	-				-0.7
2,333,296	-				+1.1
2,333,296	-				-0.7
2,333,297	+				-0.6
2,333,297	+				-2.9
2,333,297	+				-1.1
2,333,297	+				-0.8
2,333,298	-				-2.0
2,333,632	-				+0.6
2,333,696	-				-2.1
2,333,696	-				-1.4
2,333,712	+				-2.0
2,333,712	+				-1.2
2,333,713	-				-1.0
2,333,713	-				-1.7
2,333,713	-				-1.0
2,333,713	-				+0.2