Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS22625

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
4,892,925	+		DZA65_RS22620	0.51	-1.4
4,892,925	+		DZA65_RS22620	0.51	-0.1
4,892,925	+		DZA65_RS22620	0.51	+0.7
4,892,925	+		DZA65_RS22620	0.51	+0.1
4,892,925	+		DZA65_RS22620	0.51	+0.2
4,892,925	+		DZA65_RS22620	0.51	+0.2
4,892,925	+		DZA65_RS22620	0.51	-0.3
4,892,925	+		DZA65_RS22620	0.51	-0.6
4,892,925	+		DZA65_RS22620	0.51	-0.4
4,892,926	-		DZA65_RS22620	0.51	+0.1
4,892,926	-		DZA65_RS22620	0.51	-2.8
4,892,926	-		DZA65_RS22620	0.51	-0.4
4,892,926	-		DZA65_RS22620	0.51	-1.2
4,892,926	-		DZA65_RS22620	0.51	+0.4
4,892,960	+		DZA65_RS22620	0.53	+0.3
4,893,036	+		DZA65_RS22620	0.57	-1.2
4,893,037	-		DZA65_RS22620	0.57	-0.4
4,893,037	-		DZA65_RS22620	0.57	-1.4
4,893,037	-		DZA65_RS22620	0.57	-0.5
4,893,037	-		DZA65_RS22620	0.57	+0.6
4,893,096	+		DZA65_RS22620	0.60	-0.2
4,893,097	-		DZA65_RS22620	0.60	-1.2
4,893,097	-		DZA65_RS22620	0.60	+0.4
4,893,097	-		DZA65_RS22620	0.60	-0.1
4,893,105	-		DZA65_RS22620	0.60	-0.2
4,893,118	+		DZA65_RS22620	0.61	+1.0
4,893,118	+		DZA65_RS22620	0.61	-0.1
4,893,172	-		DZA65_RS22620	0.64	-0.7
4,893,172	-		DZA65_RS22620	0.64	-1.7
4,893,210	+		DZA65_RS22620	0.66	-1.6
4,893,210	+		DZA65_RS22620	0.66	-0.2
4,893,210	+		DZA65_RS22620	0.66	+0.4
4,893,211	-		DZA65_RS22620	0.66	+2.4
4,893,211	-		DZA65_RS22620	0.66	-1.7
4,893,211	-		DZA65_RS22620	0.66	+0.8
4,893,211	-		DZA65_RS22620	0.66	+0.1
4,893,221	+		DZA65_RS22620	0.66	+0.4
4,893,221	+		DZA65_RS22620	0.66	-0.4
4,893,222	-		DZA65_RS22620	0.66	-0.2
4,893,269	+		DZA65_RS22620	0.68	-0.5
4,893,270	-		DZA65_RS22620	0.69	-1.0
4,893,291	+		DZA65_RS22620	0.70	+0.4
4,893,291	+		DZA65_RS22620	0.70	+1.4
4,893,291	+		DZA65_RS22620	0.70	-0.4
4,893,324	-		DZA65_RS22620	0.71	+0.2
4,893,334	-		DZA65_RS22620	0.72	-0.2
4,893,378	-		DZA65_RS22620	0.74	+0.3
4,893,437	+		DZA65_RS22620	0.77	-0.3
4,893,437	+		DZA65_RS22620	0.77	-1.2
4,893,437	+		DZA65_RS22620	0.77	+1.1
4,893,438	-		DZA65_RS22620	0.77	+1.0
4,893,438	-		DZA65_RS22620	0.77	+0.2
4,893,438	-		DZA65_RS22620	0.77	-0.7
4,893,515	+		DZA65_RS22620	0.81	-0.2
4,893,563	+				-0.2
4,893,563	+		DZA65_RS22620	0.83	-0.9
4,893,564	-		DZA65_RS22620	0.83	-1.4
4,893,589	+		DZA65_RS22620	0.85	-1.2
4,893,589	+		DZA65_RS22620	0.85	-0.3
4,893,590	-		DZA65_RS22620	0.85	-0.5
4,893,590	-		DZA65_RS22620	0.85	-0.7
4,893,590	-		DZA65_RS22620	0.85	+0.3
4,893,590	-		DZA65_RS22620	0.85	-1.2
4,893,712	+				-1.2
4,893,713	-				+0.2
4,893,713	-				-0.1
4,893,726	+				-0.6
4,893,726	+				+0.1
4,893,726	+				-0.6
4,893,726	+				+1.6
4,893,726	+				-0.4
4,893,726	+				+0.1
4,893,727	-				-2.4
4,893,727	-				+0.8
4,893,727	-				-1.1
4,893,727	-				+0.5
4,893,727	-				-0.5
4,893,727	-				-0.2
4,893,727	-				-0.7
4,893,729	+				-1.4
4,893,730	-				-0.4
4,893,730	-				-0.3
4,893,730	-				-0.6
4,893,761	+				-0.2
4,893,904	-				-0.9
4,893,925	+				-1.9
4,893,925	+				-2.1
4,893,925	+				-3.3
4,893,925	+				+1.4
4,893,980	+				-1.9
4,894,100	+		DZA65_RS22625	0.23	+0.2
4,894,100	+		DZA65_RS22625	0.23	-1.4
4,894,100	+		DZA65_RS22625	0.23	-4.3
4,894,100	+		DZA65_RS22625	0.23	-2.4
4,894,100	+		DZA65_RS22625	0.23	-2.8
4,894,100	+		DZA65_RS22625	0.23	-1.9
4,894,101	-		DZA65_RS22625	0.23	-1.4
4,894,101	-		DZA65_RS22625	0.23	-2.8
4,894,171	+		DZA65_RS22625	0.31	-1.9
4,894,299	+		DZA65_RS22625	0.45	-2.9
4,894,398	-		DZA65_RS22625	0.56	-2.0
4,894,398	-		DZA65_RS22625	0.56	+0.1
4,894,442	-		DZA65_RS22625	0.61	-1.4
4,894,442	-		DZA65_RS22625	0.61	-1.0
4,894,538	+		DZA65_RS22625	0.72	-0.4
4,894,539	-		DZA65_RS22625	0.72	-2.1
4,894,540	+		DZA65_RS22625	0.72	-0.2
4,894,540	+		DZA65_RS22625	0.72	-1.6
4,894,540	+		DZA65_RS22625	0.72	-2.3
4,894,541	-		DZA65_RS22625	0.72	-1.9
4,894,541	-		DZA65_RS22625	0.72	-1.3
4,894,541	-		DZA65_RS22625	0.72	-0.2
4,894,580	+		DZA65_RS22625	0.76	-0.3
4,894,580	+		DZA65_RS22625	0.76	-1.4
4,894,580	+		DZA65_RS22625	0.76	-1.6
4,894,580	+		DZA65_RS22625	0.76	-0.6
4,894,580	+		DZA65_RS22625	0.76	-2.1
4,894,580	+		DZA65_RS22625	0.76	-3.6
4,894,580	+		DZA65_RS22625	0.76	-0.3
4,894,581	-		DZA65_RS22625	0.76	-1.5
4,894,581	-		DZA65_RS22625	0.76	-2.8
4,894,581	-		DZA65_RS22625	0.76	-1.4
4,894,581	-		DZA65_RS22625	0.76	-2.6
4,894,581	-		DZA65_RS22625	0.76	-3.1
4,894,581	-		DZA65_RS22625	0.76	+0.7
4,894,581	-		DZA65_RS22625	0.76	-1.8
4,894,581	-		DZA65_RS22625	0.76	-2.5
4,894,581	-		DZA65_RS22625	0.76	-1.6
4,894,582	+		DZA65_RS22625	0.77	-3.2
4,894,582	+		DZA65_RS22625	0.77	-0.9
4,894,582	+		DZA65_RS22625	0.77	-0.2
4,894,582	+		DZA65_RS22625	0.77	-1.9
4,894,582	+		DZA65_RS22625	0.77	-0.1
4,894,582	+		DZA65_RS22625	0.77	-1.2
4,894,582	+		DZA65_RS22625	0.77	-1.5
4,894,583	-		DZA65_RS22625	0.77	-0.2
4,894,583	-		DZA65_RS22625	0.77	-2.1
4,894,583	-		DZA65_RS22625	0.77	-0.6
4,894,706	-				+2.4
4,894,706	-				-1.2
4,894,798	+				+0.1
4,894,798	+				+3.7
4,894,798	+				-0.8
4,894,798	+				-0.1
4,894,798	+				-1.2
4,894,798	+				+0.2
4,894,798	+				+1.1
4,894,799	-				+0.7
4,894,799	-				-0.5
4,894,799	-				-0.8
4,894,799	-				-2.3
4,894,799	-				-0.7
4,894,832	+				-0.2
4,894,840	+				-1.1
4,894,840	+				-1.6
4,894,840	+				+1.1
4,894,841	-				-0.5
4,894,841	-				+0.8
4,894,841	-				-2.3
4,894,843	+				-0.2
4,894,843	+				-1.2
4,894,843	+				+0.4
4,894,844	-				+0.0
4,894,848	+				-0.6
4,894,848	+				-0.6
4,894,849	-				-1.6
4,894,872	-				+2.1
4,894,872	-				-0.8
4,894,963	+		DZA65_RS22630	0.10	+0.1
4,894,963	+		DZA65_RS22630	0.10	+0.8
4,894,964	-		DZA65_RS22630	0.10	-0.6
4,895,025	+		DZA65_RS22630	0.14	+0.3
4,895,025	+		DZA65_RS22630	0.14	-0.4
4,895,025	+		DZA65_RS22630	0.14	-1.2
4,895,026	-		DZA65_RS22630	0.14	+1.4
4,895,026	-		DZA65_RS22630	0.14	-1.6
4,895,028	+		DZA65_RS22630	0.14	-2.2
4,895,028	+		DZA65_RS22630	0.14	+0.5
4,895,086	+		DZA65_RS22630	0.18	+1.4
4,895,087	-		DZA65_RS22630	0.18	-0.8
4,895,087	-		DZA65_RS22630	0.18	-1.7
4,895,087	-		DZA65_RS22630	0.18	-1.5
4,895,122	-		DZA65_RS22630	0.20	-2.4
4,895,143	-		DZA65_RS22630	0.21	-0.9
4,895,146	+		DZA65_RS22630	0.21	-1.6
4,895,147	-		DZA65_RS22630	0.21	-2.5
4,895,147	-		DZA65_RS22630	0.21	-0.2
4,895,167	+		DZA65_RS22630	0.23	+1.0
4,895,167	+		DZA65_RS22630	0.23	+1.2
4,895,168	-		DZA65_RS22630	0.23	-0.2
4,895,168	-		DZA65_RS22630	0.23	+1.1
4,895,168	-		DZA65_RS22630	0.23	-2.3
4,895,168	-		DZA65_RS22630	0.23	-0.8
4,895,182	+				-1.2
4,895,182	+		DZA65_RS22630	0.24	-0.2
4,895,182	+		DZA65_RS22630	0.24	-0.8
4,895,182	+		DZA65_RS22630	0.24	-0.9
4,895,182	+		DZA65_RS22630	0.24	+0.0
4,895,182	+		DZA65_RS22630	0.24	-0.0
4,895,183	-		DZA65_RS22630	0.24	+1.1
4,895,183	-		DZA65_RS22630	0.24	-0.8
4,895,183	-		DZA65_RS22630	0.24	-0.6
4,895,183	-		DZA65_RS22630	0.24	-0.3
4,895,183	-		DZA65_RS22630	0.24	-1.4
4,895,183	-				+1.4
4,895,183	-		DZA65_RS22630	0.24	-0.5
4,895,183	-		DZA65_RS22630	0.24	-1.0
4,895,200	-		DZA65_RS22630	0.25	-3.0
4,895,200	-		DZA65_RS22630	0.25	+0.4
4,895,200	-		DZA65_RS22630	0.25	+2.4
4,895,200	-		DZA65_RS22630	0.25	-1.8
4,895,200	-		DZA65_RS22630	0.25	-0.1
4,895,272	-		DZA65_RS22630	0.29	-0.2
4,895,284	+		DZA65_RS22630	0.30	+0.4
4,895,284	+		DZA65_RS22630	0.30	-0.4
4,895,285	-				-0.2
4,895,410	+		DZA65_RS22630	0.37	-1.9
4,895,497	+		DZA65_RS22630	0.42	-1.6
4,895,497	+		DZA65_RS22630	0.42	-0.2
4,895,497	+		DZA65_RS22630	0.42	-2.9
4,895,497	+		DZA65_RS22630	0.42	-1.4
4,895,498	-		DZA65_RS22630	0.43	-0.9
4,895,517	+		DZA65_RS22630	0.44	-0.3
4,895,517	+		DZA65_RS22630	0.44	-0.1
4,895,517	+		DZA65_RS22630	0.44	+0.3
4,895,517	+		DZA65_RS22630	0.44	-1.6
4,895,517	+		DZA65_RS22630	0.44	-0.6
4,895,517	+		DZA65_RS22630	0.44	-1.3
4,895,517	+		DZA65_RS22630	0.44	+0.7
4,895,517	+		DZA65_RS22630	0.44	+0.3
4,895,517	+		DZA65_RS22630	0.44	-2.7
4,895,517	+		DZA65_RS22630	0.44	-0.4
4,895,518	-		DZA65_RS22630	0.44	+0.3
4,895,518	-		DZA65_RS22630	0.44	+0.2
4,895,518	-		DZA65_RS22630	0.44	-1.8
4,895,518	-		DZA65_RS22630	0.44	+0.4
4,895,518	-		DZA65_RS22630	0.44	+0.3
4,895,570	-		DZA65_RS22630	0.47	+0.0
4,895,572	+		DZA65_RS22630	0.47	-0.4
4,895,572	+		DZA65_RS22630	0.47	-0.9
4,895,573	-		DZA65_RS22630	0.47	+1.2
4,895,573	-		DZA65_RS22630	0.47	-0.2
4,895,573	-		DZA65_RS22630	0.47	-1.2
4,895,573	-		DZA65_RS22630	0.47	-0.8
4,895,674	+		DZA65_RS22630	0.53	-0.5
4,895,740	+		DZA65_RS22630	0.57	-0.7
4,895,740	+		DZA65_RS22630	0.57	-2.8
4,895,740	+		DZA65_RS22630	0.57	-1.8
4,895,740	+		DZA65_RS22630	0.57	-1.4
4,895,740	+		DZA65_RS22630	0.57	-0.8
4,895,740	+		DZA65_RS22630	0.57	-1.2
4,895,741	-		DZA65_RS22630	0.57	-0.5
4,895,741	-		DZA65_RS22630	0.57	-1.5
4,895,741	-		DZA65_RS22630	0.57	-0.2
4,895,741	-		DZA65_RS22630	0.57	-0.2
4,895,741	-		DZA65_RS22630	0.57	+1.2
4,895,741	-		DZA65_RS22630	0.57	+0.4
4,895,741	-		DZA65_RS22630	0.57	+1.4
4,895,741	-		DZA65_RS22630	0.57	-0.0