Strain Fitness in Dickeya dianthicola ME23

Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS21525

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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Per-strain Table

Position	Strand	LocusTag	Fraction	M9+glycerol
				remove
4,654,938	+	DZA65_RS21515	0.89	-0.0
4,654,938	+	DZA65_RS21515	0.89	+0.5
4,654,938	+	DZA65_RS21515	0.89	+0.8
4,654,938	+	DZA65_RS21515	0.89	+0.8
4,654,938	+	DZA65_RS21515	0.89	-0.2
4,654,939	-	DZA65_RS21515	0.89	-1.2
4,654,939	-	DZA65_RS21515	0.89	-0.7
4,654,939	-	DZA65_RS21515	0.89	+3.0
4,654,939	-	DZA65_RS21515	0.89	-1.4
4,654,939	-	DZA65_RS21515	0.89	+0.6
4,654,990	-			+0.0
4,655,059	-			+0.1
4,655,077	+			-1.8
4,655,078	-			-0.5
4,655,108	+	DZA65_RS21520	0.21	-1.2
4,655,126	+	DZA65_RS21520	0.28	-0.7
4,655,126	+	DZA65_RS21520	0.28	+0.6
4,655,126	+	DZA65_RS21520	0.28	-0.8
4,655,127	-	DZA65_RS21520	0.29	-1.4
4,655,170	+	DZA65_RS21520	0.47	-1.1
4,655,170	+	DZA65_RS21520	0.47	+0.3
4,655,170	+			+0.4
4,655,194	+	DZA65_RS21520	0.56	-2.2
4,655,194	+	DZA65_RS21520	0.56	+0.6
4,655,194	+	DZA65_RS21520	0.56	-0.5
4,655,194	+	DZA65_RS21520	0.56	-0.2
4,655,194	+	DZA65_RS21520	0.56	-0.5
4,655,194	+	DZA65_RS21520	0.56	-1.0
4,655,194	+	DZA65_RS21520	0.56	-1.2
4,655,194	+	DZA65_RS21520	0.56	-0.2
4,655,194	+	DZA65_RS21520	0.56	-0.6
4,655,194	+	DZA65_RS21520	0.56	+0.4
4,655,194	+	DZA65_RS21520	0.56	-1.0
4,655,194	+	DZA65_RS21520	0.56	+0.4
4,655,194	+	DZA65_RS21520	0.56	+0.6
4,655,194	+	DZA65_RS21520	0.56	-1.4
4,655,194	+	DZA65_RS21520	0.56	+0.1
4,655,194	+	DZA65_RS21520	0.56	-0.6
4,655,194	+	DZA65_RS21520	0.56	-0.1
4,655,194	+	DZA65_RS21520	0.56	+1.0
4,655,194	+	DZA65_RS21520	0.56	-1.3
4,655,194	+	DZA65_RS21520	0.56	-0.6
4,655,194	+	DZA65_RS21520	0.56	+0.4
4,655,194	+	DZA65_RS21520	0.56	+0.4
4,655,194	+	DZA65_RS21520	0.56	+0.1
4,655,194	+	DZA65_RS21520	0.56	+1.0
4,655,195	-	DZA65_RS21520	0.57	-1.4
4,655,195	-	DZA65_RS21520	0.57	-0.6
4,655,195	-	DZA65_RS21520	0.57	-2.2
4,655,195	-	DZA65_RS21520	0.57	+2.4
4,655,195	-	DZA65_RS21520	0.57	+0.0
4,655,195	-	DZA65_RS21520	0.57	-0.3
4,655,195	-	DZA65_RS21520	0.57	+0.2
4,655,195	-	DZA65_RS21520	0.57	-0.2
4,655,195	-	DZA65_RS21520	0.57	+0.7
4,655,195	-	DZA65_RS21520	0.57	+0.1
4,655,195	-	DZA65_RS21520	0.57	-1.1
4,655,195	-	DZA65_RS21520	0.57	-1.6
4,655,195	-	DZA65_RS21520	0.57	-1.0
4,655,195	-	DZA65_RS21520	0.57	-1.5
4,655,195	-	DZA65_RS21520	0.57	+0.6
4,655,195	-	DZA65_RS21520	0.57	-0.7
4,655,195	-	DZA65_RS21520	0.57	-0.1
4,655,195	-	DZA65_RS21520	0.57	-1.4
4,655,299	+			-0.2
4,655,299	+			-0.6
4,655,299	+			-0.3
4,655,299	+			+2.0
4,655,299	+			-1.2
4,655,300	-			-1.2
4,655,300	-			-0.2
4,655,317	+			-1.0
4,655,329	+			-0.3
4,655,330	-			-0.6
4,655,349	+			-0.6
4,655,349	+			+1.0
4,655,349	+			+1.4
4,655,349	+			-0.2
4,655,349	+			-0.8
4,655,349	+			-0.7
4,655,349	+			+0.0
4,655,349	+			+0.0
4,655,350	-			+0.4
4,655,350	-			+0.4
4,655,350	-			-1.3
4,655,350	-			+1.5
4,655,350	-			+0.0
4,655,350	-			+1.0
4,655,350	-			+1.5
4,655,350	-			-2.0
4,655,350	-			+0.1
4,655,350	-			+0.8
4,655,350	-			-1.4
4,655,398	+			+1.0
4,655,399	-			+0.1
4,655,399	-			-1.0
4,655,406	+			+1.1
4,655,407	-			-1.1
4,655,407	-			+0.3
4,655,407	-			-0.3
4,655,409	+			+1.1
4,655,409	+			-1.1
4,655,409	+			+0.2
4,655,409	+			+0.7
4,655,409	+			-2.5
4,655,409	+			+0.4
4,655,409	+			-1.6
4,655,409	+			-1.8
4,655,409	+			+0.9
4,655,409	+			+1.0
4,655,409	+			-0.6
4,655,409	+			-0.5
4,655,409	+			+0.4
4,655,410	-			-0.9
4,655,410	-			+0.5
4,655,410	-			-0.4
4,655,410	-			+2.0
4,655,410	-			+1.4
4,655,410	-			-0.1
4,655,410	-			-0.5
4,655,467	-			-1.6
4,655,467	-			-0.4
4,655,467	-			-0.8
4,655,484	+			-2.7
4,655,484	+			+0.4
4,655,484	+			-0.2
4,655,484	+			-1.4
4,655,485	-			+2.2
4,655,485	-			-1.4
4,655,485	-			-2.2
4,655,485	-			+0.5
4,655,485	-			+0.0
4,655,488	+			+0.4
4,655,488	+			+1.4
4,655,488	+			+1.4
4,655,489	-			-1.6
4,655,522	-			+1.4
4,655,593	+			+1.0
4,655,603	+			+0.2
4,655,604	-			+0.0
4,655,618	+			+0.1
4,655,618	+			+0.5
4,655,618	+			-1.2
4,655,619	-			+0.4
4,655,680	-			+0.6
4,655,764	+			-1.8
4,655,764	+			+1.4
4,655,765	-			-0.1
4,655,765	-			-2.5
4,655,765	-			-2.4
4,655,827	+			-0.6
4,655,827	+			-1.8
4,655,827	+			-0.2
4,655,828	-			+0.3
4,655,828	-			-0.6
4,655,860	+			+0.9
4,655,860	+			-0.6
4,655,861	-			-1.6
4,655,861	-			-3.0
4,655,865	+			-0.6
4,655,865	+			-0.6
4,655,865	+			-0.7
4,655,865	+			-0.4
4,655,865	+			+0.2
4,655,865	+			-1.0
4,655,866	-			-1.2
4,655,866	-			+1.8
4,655,866	-			-1.8
4,655,884	+			-2.0
4,655,884	+			-1.8
4,655,885	-			-2.3
4,655,885	-			-2.4
4,655,885	-			-1.8
4,656,028	+	DZA65_RS21525	0.17	-2.8
4,656,028	+	DZA65_RS21525	0.17	-2.0
4,656,028	+	DZA65_RS21525	0.17	-2.0
4,656,028	+	DZA65_RS21525	0.17	-1.6
4,656,029	-	DZA65_RS21525	0.17	-2.4
4,656,029	-	DZA65_RS21525	0.17	-3.3
4,656,029	-	DZA65_RS21525	0.17	-2.2
4,656,059	+	DZA65_RS21525	0.21	-2.5
4,656,059	+	DZA65_RS21525	0.21	-0.2
4,656,059	+	DZA65_RS21525	0.21	-1.2
4,656,060	-	DZA65_RS21525	0.21	-2.4
4,656,060	-	DZA65_RS21525	0.21	-1.9
4,656,060	-	DZA65_RS21525	0.21	-1.4
4,656,060	-	DZA65_RS21525	0.21	+0.4
4,656,155	+	DZA65_RS21525	0.32	-2.8
4,656,155	+	DZA65_RS21525	0.32	-0.6
4,656,155	+	DZA65_RS21525	0.32	-1.0
4,656,155	+	DZA65_RS21525	0.32	-1.3
4,656,155	+	DZA65_RS21525	0.32	-3.0
4,656,155	+	DZA65_RS21525	0.32	-1.0
4,656,155	+	DZA65_RS21525	0.32	+0.0
4,656,155	+	DZA65_RS21525	0.32	-3.3
4,656,155	+	DZA65_RS21525	0.32	-2.0
4,656,155	+	DZA65_RS21525	0.32	-2.9
4,656,155	+	DZA65_RS21525	0.32	-1.8
4,656,155	+	DZA65_RS21525	0.32	+0.6
4,656,155	+	DZA65_RS21525	0.32	-2.7
4,656,155	+	DZA65_RS21525	0.32	+0.8
4,656,155	+	DZA65_RS21525	0.32	-2.9
4,656,155	+	DZA65_RS21525	0.32	-1.8
4,656,156	-	DZA65_RS21525	0.32	-0.8
4,656,156	-	DZA65_RS21525	0.32	-1.0
4,656,156	-	DZA65_RS21525	0.32	-2.6
4,656,156	-	DZA65_RS21525	0.32	-2.1
4,656,156	-	DZA65_RS21525	0.32	-1.6
4,656,156	-	DZA65_RS21525	0.32	-2.0
4,656,156	-	DZA65_RS21525	0.32	-1.4
4,656,156	-	DZA65_RS21525	0.32	-0.2
4,656,156	-	DZA65_RS21525	0.32	-2.0
4,656,156	-			-1.2
4,656,156	-	DZA65_RS21525	0.32	-1.8
4,656,156	-	DZA65_RS21525	0.32	-2.5
4,656,156	-	DZA65_RS21525	0.32	-2.7
4,656,156	-	DZA65_RS21525	0.32	-1.9
4,656,156	-	DZA65_RS21525	0.32	-0.4
4,656,156	-	DZA65_RS21525	0.32	-1.8
4,656,156	-	DZA65_RS21525	0.32	-1.2
4,656,156	-	DZA65_RS21525	0.32	-1.4
4,656,156	-	DZA65_RS21525	0.32	-1.8
4,656,156	-	DZA65_RS21525	0.32	-2.9
4,656,156	-	DZA65_RS21525	0.32	-1.0
4,656,156	-	DZA65_RS21525	0.32	-0.2
4,656,156	-	DZA65_RS21525	0.32	-1.2
4,656,157	+	DZA65_RS21525	0.32	-1.8
4,656,157	+	DZA65_RS21525	0.32	-1.8
4,656,157	+	DZA65_RS21525	0.32	-1.8
4,656,158	-	DZA65_RS21525	0.32	-4.0
4,656,158	-	DZA65_RS21525	0.32	-4.5
4,656,158	-	DZA65_RS21525	0.32	-1.2
4,656,158	-	DZA65_RS21525	0.32	-1.2
4,656,158	-	DZA65_RS21525	0.32	-1.4
4,656,203	+	DZA65_RS21525	0.38	-1.8
4,656,204	-	DZA65_RS21525	0.38	-1.0
4,656,212	+	DZA65_RS21525	0.39	+0.0
4,656,213	-	DZA65_RS21525	0.39	-2.7
4,656,213	-	DZA65_RS21525	0.39	-1.4
4,656,213	-	DZA65_RS21525	0.39	-1.4
4,656,302	+	DZA65_RS21525	0.49	-2.0
4,656,302	+	DZA65_RS21525	0.49	-2.2
4,656,302	+	DZA65_RS21525	0.49	-0.2
4,656,303	-	DZA65_RS21525	0.49	-2.4
4,656,303	-	DZA65_RS21525	0.49	-1.2
4,656,303	-	DZA65_RS21525	0.49	-2.3
4,656,303	-	DZA65_RS21525	0.49	-2.5
4,656,308	-	DZA65_RS21525	0.50	-1.0
4,656,442	+	DZA65_RS21525	0.66	-3.6
4,656,533	+	DZA65_RS21525	0.77	+1.4
4,656,533	+	DZA65_RS21525	0.77	-2.1
4,656,561	+	DZA65_RS21525	0.80	-1.6
4,656,562	-	DZA65_RS21525	0.80	-2.9
4,656,584	+	DZA65_RS21525	0.83	-0.6
4,656,584	+	DZA65_RS21525	0.83	-1.6
4,656,584	+	DZA65_RS21525	0.83	+0.7
4,656,584	+	DZA65_RS21525	0.83	-1.2
4,656,584	+	DZA65_RS21525	0.83	+0.4
4,656,584	+	DZA65_RS21525	0.83	-0.1
4,656,584	+	DZA65_RS21525	0.83	-1.3
4,656,584	+	DZA65_RS21525	0.83	-2.1
4,656,584	+	DZA65_RS21525	0.83	-0.1
4,656,584	+	DZA65_RS21525	0.83	-1.1
4,656,584	+	DZA65_RS21525	0.83	-0.1
4,656,584	+	DZA65_RS21525	0.83	-1.1
4,656,584	+	DZA65_RS21525	0.83	-1.8
4,656,584	+	DZA65_RS21525	0.83	+0.6
4,656,585	-	DZA65_RS21525	0.83	+0.4
4,656,585	-	DZA65_RS21525	0.83	-1.7
4,656,585	-	DZA65_RS21525	0.83	-1.4
4,656,585	-	DZA65_RS21525	0.83	-1.6
4,656,585	-	DZA65_RS21525	0.83	-0.5
4,656,586	+	DZA65_RS21525	0.83	-1.7
4,656,586	+	DZA65_RS21525	0.83	-0.5
4,656,586	+	DZA65_RS21525	0.83	-1.6
4,656,586	+	DZA65_RS21525	0.83	-1.6
4,656,586	+	DZA65_RS21525	0.83	-1.8
4,656,586	+	DZA65_RS21525	0.83	-0.7
4,656,586	+	DZA65_RS21525	0.83	-1.8
4,656,586	+	DZA65_RS21525	0.83	-0.6
4,656,586	+	DZA65_RS21525	0.83	-2.4
4,656,586	+	DZA65_RS21525	0.83	-1.2
4,656,586	+	DZA65_RS21525	0.83	-1.5
4,656,586	+	DZA65_RS21525	0.83	-1.3
4,656,586	+	DZA65_RS21525	0.83	+0.9
4,656,586	+	DZA65_RS21525	0.83	-1.2
4,656,586	+	DZA65_RS21525	0.83	-1.4
4,656,587	-			-1.0
4,656,587	-	DZA65_RS21525	0.83	-1.4
4,656,587	-	DZA65_RS21525	0.83	+0.4
4,656,587	-	DZA65_RS21525	0.83	-0.3
4,656,587	-	DZA65_RS21525	0.83	-1.7
4,656,587	-	DZA65_RS21525	0.83	-3.4
4,656,587	-	DZA65_RS21525	0.83	-1.2
4,656,587	-	DZA65_RS21525	0.83	-2.4
4,656,587	-	DZA65_RS21525	0.83	-3.9
4,656,587	-	DZA65_RS21525	0.83	-2.4
4,656,587	-	DZA65_RS21525	0.83	+0.8
4,656,587	-	DZA65_RS21525	0.83	-1.8
4,656,587	-	DZA65_RS21525	0.83	-1.0
4,656,587	-	DZA65_RS21525	0.83	-3.3
4,656,587	-	DZA65_RS21525	0.83	-1.8
4,656,587	-	DZA65_RS21525	0.83	-0.8
4,656,591	+	DZA65_RS21525	0.83	+0.4
4,656,591	+	DZA65_RS21525	0.83	-1.3
4,656,591	+	DZA65_RS21525	0.83	-1.6
4,656,591	+	DZA65_RS21525	0.83	-0.3
4,656,591	+	DZA65_RS21525	0.83	+0.5
4,656,591	+	DZA65_RS21525	0.83	-1.3
4,656,592	-	DZA65_RS21525	0.84	-2.3
4,656,592	-	DZA65_RS21525	0.84	-2.2
4,656,592	-	DZA65_RS21525	0.84	-2.2
4,656,592	-	DZA65_RS21525	0.84	-1.3
4,656,592	-	DZA65_RS21525	0.84	-0.6
4,656,592	-	DZA65_RS21525	0.84	-2.4
4,656,592	-	DZA65_RS21525	0.84	-2.2
4,656,592	-	DZA65_RS21525	0.84	-3.5
4,656,592	-	DZA65_RS21525	0.84	-3.2
4,656,592	-	DZA65_RS21525	0.84	-2.1
4,656,592	-	DZA65_RS21525	0.84	-2.0
4,656,592	-	DZA65_RS21525	0.84	-2.4
4,656,592	-	DZA65_RS21525	0.84	-0.8
4,656,728	+			-2.3
4,656,729	-			-3.2
4,656,729	-			-1.4
4,656,734	+			-1.2
4,656,734	+			-0.2
4,656,734	+			-3.3
4,656,735	-			-1.8
4,656,735	-			-1.4
4,656,735	-			+0.8
4,656,735	-			-3.0
4,656,752	+			-1.0
4,656,752	+			-1.8
4,656,752	+			-1.3
4,656,752	+			-2.6
4,656,752	+			-2.0
4,656,753	-			-0.2
4,656,753	-			-3.1
4,656,753	-			-1.7
4,656,753	-			-1.4
4,656,753	-			-1.4
4,656,753	-			-2.1
4,656,759	-			-3.2
4,656,759	-			-2.1
4,656,759	-			-1.8
4,656,778	-			-1.1
4,656,853	+			-3.0
4,657,027	+	DZA65_RS21530	0.18	-1.0
4,657,047	-	DZA65_RS21530	0.19	-1.6
4,657,056	+	DZA65_RS21530	0.20	-1.2
4,657,056	+	DZA65_RS21530	0.20	-4.6
4,657,056	+	DZA65_RS21530	0.20	-1.0
4,657,057	-	DZA65_RS21530	0.20	-4.2
4,657,057	-	DZA65_RS21530	0.20	-3.5
4,657,057	-	DZA65_RS21530	0.20	-2.2
4,657,057	-	DZA65_RS21530	0.20	-3.0
4,657,057	-	DZA65_RS21530	0.20	+0.4
4,657,057	-	DZA65_RS21530	0.20	-2.6
4,657,057	-	DZA65_RS21530	0.20	-2.5
4,657,057	-	DZA65_RS21530	0.20	-1.6
4,657,057	-	DZA65_RS21530	0.20	-1.5
4,657,057	-	DZA65_RS21530	0.20	-2.5
4,657,131	+	DZA65_RS21530	0.25	-2.8
4,657,131	+	DZA65_RS21530	0.25	-2.0
4,657,131	+	DZA65_RS21530	0.25	-1.7
4,657,131	+	DZA65_RS21530	0.25	-2.1
4,657,131	+	DZA65_RS21530	0.25	-1.6
4,657,131	+	DZA65_RS21530	0.25	-3.8
4,657,131	+	DZA65_RS21530	0.25	-2.0
4,657,131	+	DZA65_RS21530	0.25	-1.0
4,657,131	+	DZA65_RS21530	0.25	-1.8
4,657,131	+	DZA65_RS21530	0.25	-2.2
4,657,132	-	DZA65_RS21530	0.25	-2.1
4,657,132	-	DZA65_RS21530	0.25	-3.5
4,657,132	-	DZA65_RS21530	0.25	-3.4
4,657,132	-	DZA65_RS21530	0.25	-3.7
4,657,132	-	DZA65_RS21530	0.25	+1.4
4,657,132	-	DZA65_RS21530	0.25	+0.0
4,657,132	-	DZA65_RS21530	0.25	-3.4
4,657,132	-	DZA65_RS21530	0.25	-1.0
4,657,132	-	DZA65_RS21530	0.25	-2.2
4,657,132	-	DZA65_RS21530	0.25	-2.2
4,657,132	-	DZA65_RS21530	0.25	+1.0
4,657,132	-	DZA65_RS21530	0.25	-1.0
4,657,132	-	DZA65_RS21530	0.25	-0.2
4,657,133	+	DZA65_RS21530	0.25	-1.8
4,657,133	+	DZA65_RS21530	0.25	-5.2
4,657,134	-	DZA65_RS21530	0.25	-1.6
4,657,134	-	DZA65_RS21530	0.25	-3.9
4,657,167	+	DZA65_RS21530	0.27	-3.6
4,657,168	-	DZA65_RS21530	0.27	-1.4
4,657,246	+	DZA65_RS21530	0.32	-4.3
4,657,262	+	DZA65_RS21530	0.33	-2.4
4,657,263	-	DZA65_RS21530	0.33	-3.1
4,657,271	+	DZA65_RS21530	0.34	-2.6
4,657,272	-	DZA65_RS21530	0.34	-3.0
4,657,272	-	DZA65_RS21530	0.34	-2.1
4,657,272	-	DZA65_RS21530	0.34	-1.4
4,657,272	-	DZA65_RS21530	0.34	-2.5
4,657,272	-	DZA65_RS21530	0.34	-2.3
4,657,312	-	DZA65_RS21530	0.37	-3.0
4,657,349	+	DZA65_RS21530	0.39	-2.2
4,657,435	-	DZA65_RS21530	0.45	-1.8
4,657,515	+	DZA65_RS21530	0.50	-0.4
4,657,515	+	DZA65_RS21530	0.50	-0.8
4,657,516	-	DZA65_RS21530	0.50	-1.0
4,657,516	-	DZA65_RS21530	0.50	+1.4
4,657,531	+	DZA65_RS21530	0.51	-2.2
4,657,532	-	DZA65_RS21530	0.51	-1.5
4,657,557	+	DZA65_RS21530	0.53	-2.2
4,657,557	+	DZA65_RS21530	0.53	-2.1
4,657,557	+	DZA65_RS21530	0.53	-0.6
4,657,558	-	DZA65_RS21530	0.53	-2.2
4,657,657	+	DZA65_RS21530	0.59	-2.0
4,657,657	+	DZA65_RS21530	0.59	-0.4
4,657,658	-	DZA65_RS21530	0.59	-1.8
4,657,658	-	DZA65_RS21530	0.59	-0.0
4,657,658	-	DZA65_RS21530	0.59	-2.1
4,657,658	-	DZA65_RS21530	0.59	-1.8
4,657,662	+	DZA65_RS21530	0.60	-3.2
4,657,662	+			-1.0
4,657,662	+	DZA65_RS21530	0.60	-3.0
4,657,662	+	DZA65_RS21530	0.60	-1.2
4,657,662	+	DZA65_RS21530	0.60	-2.0
4,657,662	+	DZA65_RS21530	0.60	-1.2
4,657,662	+	DZA65_RS21530	0.60	-3.1
4,657,662	+			+0.8
4,657,662	+	DZA65_RS21530	0.60	-1.4
4,657,662	+	DZA65_RS21530	0.60	-3.2
4,657,662	+	DZA65_RS21530	0.60	-4.4
4,657,662	+	DZA65_RS21530	0.60	-1.0
4,657,663	-	DZA65_RS21530	0.60	-3.1
4,657,663	-	DZA65_RS21530	0.60	-1.2
4,657,663	-	DZA65_RS21530	0.60	+0.1
4,657,663	-	DZA65_RS21530	0.60	-3.6
4,657,663	-	DZA65_RS21530	0.60	-1.2
4,657,663	-	DZA65_RS21530	0.60	+0.2
4,657,663	-	DZA65_RS21530	0.60	-2.0
4,657,663	-	DZA65_RS21530	0.60	-2.4
4,657,663	-	DZA65_RS21530	0.60	-2.8
4,657,663	-	DZA65_RS21530	0.60	-2.6
4,657,663	-	DZA65_RS21530	0.60	-1.4

Or see this region's nucleotide sequence