Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS20580

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
4,439,014	+		DZA65_RS20575	0.27	-1.2
4,439,014	+		DZA65_RS20575	0.27	+1.3
4,439,014	+		DZA65_RS20575	0.27	-2.2
4,439,015	-		DZA65_RS20575	0.27	-0.7
4,439,015	-		DZA65_RS20575	0.27	+0.5
4,439,015	-		DZA65_RS20575	0.27	+0.0
4,439,123	+		DZA65_RS20575	0.37	-1.7
4,439,224	+		DZA65_RS20575	0.46	+0.4
4,439,224	+		DZA65_RS20575	0.46	-1.3
4,439,224	+		DZA65_RS20575	0.46	+1.0
4,439,224	+		DZA65_RS20575	0.46	-0.0
4,439,225	-		DZA65_RS20575	0.46	+1.3
4,439,225	-		DZA65_RS20575	0.46	+0.5
4,439,225	-		DZA65_RS20575	0.46	-1.7
4,439,225	-		DZA65_RS20575	0.46	-0.8
4,439,225	-		DZA65_RS20575	0.46	-2.8
4,439,236	+		DZA65_RS20575	0.47	-0.5
4,439,236	+		DZA65_RS20575	0.47	-1.3
4,439,236	+		DZA65_RS20575	0.47	+0.3
4,439,236	+		DZA65_RS20575	0.47	+0.7
4,439,236	+		DZA65_RS20575	0.47	+0.3
4,439,237	-		DZA65_RS20575	0.47	+2.3
4,439,237	-		DZA65_RS20575	0.47	+0.7
4,439,237	-		DZA65_RS20575	0.47	-0.6
4,439,237	-		DZA65_RS20575	0.47	-1.9
4,439,237	-		DZA65_RS20575	0.47	-0.4
4,439,237	-		DZA65_RS20575	0.47	-0.7
4,439,237	-		DZA65_RS20575	0.47	-1.5
4,439,237	-		DZA65_RS20575	0.47	+0.3
4,439,237	-		DZA65_RS20575	0.47	-0.4
4,439,243	+		DZA65_RS20575	0.47	-0.7
4,439,305	+		DZA65_RS20575	0.53	-0.3
4,439,305	+		DZA65_RS20575	0.53	-0.0
4,439,305	+		DZA65_RS20575	0.53	+3.0
4,439,305	+		DZA65_RS20575	0.53	+0.0
4,439,306	-		DZA65_RS20575	0.53	-0.7
4,439,306	-		DZA65_RS20575	0.53	-2.0
4,439,346	+		DZA65_RS20575	0.56	-2.2
4,439,379	-		DZA65_RS20575	0.59	-0.5
4,439,464	+		DZA65_RS20575	0.67	-0.7
4,439,465	-		DZA65_RS20575	0.67	+0.4
4,439,494	+		DZA65_RS20575	0.70	+0.2
4,439,494	+		DZA65_RS20575	0.70	+0.1
4,439,494	+		DZA65_RS20575	0.70	-1.3
4,439,495	-		DZA65_RS20575	0.70	+0.6
4,439,495	-		DZA65_RS20575	0.70	-0.0
4,439,495	-		DZA65_RS20575	0.70	+0.7
4,439,495	-		DZA65_RS20575	0.70	-1.7
4,439,495	-		DZA65_RS20575	0.70	-0.6
4,439,495	-		DZA65_RS20575	0.70	-0.1
4,439,497	+				+0.3
4,439,497	+		DZA65_RS20575	0.70	-2.3
4,439,497	+		DZA65_RS20575	0.70	-1.3
4,439,498	-		DZA65_RS20575	0.70	+1.1
4,439,546	+		DZA65_RS20575	0.74	-0.6
4,439,546	+		DZA65_RS20575	0.74	-0.1
4,439,546	+		DZA65_RS20575	0.74	-0.9
4,439,546	+		DZA65_RS20575	0.74	-1.0
4,439,546	+		DZA65_RS20575	0.74	-0.1
4,439,546	+		DZA65_RS20575	0.74	-1.7
4,439,547	-		DZA65_RS20575	0.74	-1.0
4,439,547	-		DZA65_RS20575	0.74	-1.7
4,439,547	-		DZA65_RS20575	0.74	+0.6
4,439,547	-		DZA65_RS20575	0.74	+0.3
4,439,547	-		DZA65_RS20575	0.74	-0.0
4,439,547	-		DZA65_RS20575	0.74	-1.5
4,439,547	-		DZA65_RS20575	0.74	-1.5
4,439,547	-		DZA65_RS20575	0.74	+1.5
4,439,547	-		DZA65_RS20575	0.74	-1.0
4,439,547	-		DZA65_RS20575	0.74	-2.8
4,439,547	-		DZA65_RS20575	0.74	-1.7
4,439,549	+		DZA65_RS20575	0.74	-1.3
4,439,798	+				+0.2
4,439,799	-				-1.0
4,439,817	+				-0.6
4,439,818	-				+0.1
4,439,818	-				-0.3
4,439,836	-				-0.4
4,439,858	+				-0.1
4,439,858	+				+0.1
4,439,858	+				-1.2
4,439,858	+				+1.9
4,439,858	+				+1.5
4,439,858	+				-1.0
4,439,859	-				-1.0
4,439,859	-				+0.5
4,439,859	-				-0.7
4,439,875	+				+0.3
4,439,875	+				-0.0
4,439,875	+				-0.1
4,439,875	+				-2.6
4,439,875	+				-0.1
4,439,876	-				-0.2
4,439,876	-				-1.1
4,439,876	-				+0.3
4,439,876	-				-2.0
4,439,876	-				+0.8
4,439,892	+				-1.5
4,439,892	+				-2.1
4,439,892	+				-1.8
4,439,892	+				+1.0
4,439,892	+				-0.2
4,439,892	+				+1.5
4,439,892	+				+0.8
4,439,892	+				-0.2
4,439,892	+				-0.3
4,439,892	+				-0.9
4,439,893	-				+1.0
4,439,893	-				+0.9
4,439,893	-				-1.3
4,439,893	-				+0.1
4,439,893	-				-1.3
4,439,893	-				+0.3
4,439,893	-				+0.1
4,439,893	-				-0.3
4,439,893	-				-0.2
4,439,893	-				+0.8
4,439,893	-				+0.1
4,439,893	-				+2.3
4,439,993	+				-0.6
4,440,009	+				-0.3
4,440,263	+		DZA65_RS20580	0.32	+1.9
4,440,263	+		DZA65_RS20580	0.32	-0.1
4,440,263	+		DZA65_RS20580	0.32	+1.3
4,440,263	+		DZA65_RS20580	0.32	-0.8
4,440,263	+		DZA65_RS20580	0.32	-0.3
4,440,263	+		DZA65_RS20580	0.32	-0.8
4,440,263	+		DZA65_RS20580	0.32	+0.3
4,440,264	-		DZA65_RS20580	0.32	-0.1
4,440,264	-		DZA65_RS20580	0.32	+1.7
4,440,264	-		DZA65_RS20580	0.32	-0.0
4,440,264	-		DZA65_RS20580	0.32	-1.6
4,440,264	-		DZA65_RS20580	0.32	+0.2
4,440,264	-		DZA65_RS20580	0.32	-2.7
4,440,297	+		DZA65_RS20580	0.36	-0.8
4,440,297	+		DZA65_RS20580	0.36	-0.2
4,440,297	+		DZA65_RS20580	0.36	-1.9
4,440,298	-		DZA65_RS20580	0.36	-0.0
4,440,298	-		DZA65_RS20580	0.36	-1.5
4,440,298	-		DZA65_RS20580	0.36	-0.7
4,440,306	-		DZA65_RS20580	0.37	+1.0
4,440,306	-		DZA65_RS20580	0.37	-0.4
4,440,306	-		DZA65_RS20580	0.37	+0.5
4,440,306	-		DZA65_RS20580	0.37	-1.7
4,440,306	-		DZA65_RS20580	0.37	-0.6
4,440,306	-		DZA65_RS20580	0.37	-1.3
4,440,306	-		DZA65_RS20580	0.37	+0.5
4,440,306	-		DZA65_RS20580	0.37	-2.0
4,440,306	-		DZA65_RS20580	0.37	-2.0
4,440,357	+		DZA65_RS20580	0.43	-0.2
4,440,357	+		DZA65_RS20580	0.43	-1.3
4,440,357	+		DZA65_RS20580	0.43	-1.4
4,440,357	+		DZA65_RS20580	0.43	-0.3
4,440,357	+		DZA65_RS20580	0.43	-0.7
4,440,358	-		DZA65_RS20580	0.43	-1.6
4,440,358	-		DZA65_RS20580	0.43	+0.8
4,440,358	-		DZA65_RS20580	0.43	+0.6
4,440,358	-		DZA65_RS20580	0.43	-1.9
4,440,358	-		DZA65_RS20580	0.43	-0.9
4,440,358	-		DZA65_RS20580	0.43	-0.8
4,440,358	-		DZA65_RS20580	0.43	+0.5
4,440,358	-		DZA65_RS20580	0.43	-0.6
4,440,361	+		DZA65_RS20580	0.43	-0.5
4,440,361	+		DZA65_RS20580	0.43	-0.9
4,440,361	+		DZA65_RS20580	0.43	+1.6
4,440,361	+		DZA65_RS20580	0.43	-0.5
4,440,362	-		DZA65_RS20580	0.43	+0.3
4,440,362	-		DZA65_RS20580	0.43	-1.3
4,440,368	+		DZA65_RS20580	0.44	-0.5
4,440,368	+		DZA65_RS20580	0.44	-1.0
4,440,368	+		DZA65_RS20580	0.44	-1.6
4,440,368	+		DZA65_RS20580	0.44	-0.8
4,440,369	-		DZA65_RS20580	0.44	-0.2
4,440,369	-		DZA65_RS20580	0.44	-1.5
4,440,411	+		DZA65_RS20580	0.49	+0.1
4,440,412	-		DZA65_RS20580	0.49	+0.9
4,440,438	+		DZA65_RS20580	0.52	-0.0
4,440,453	+		DZA65_RS20580	0.54	-0.9
4,440,641	+		DZA65_RS20580	0.76	+1.3
4,440,642	-		DZA65_RS20580	0.76	-2.3
4,440,642	-		DZA65_RS20580	0.76	-0.3
4,440,642	-		DZA65_RS20580	0.76	-1.1
4,440,668	+		DZA65_RS20580	0.79	-1.9
4,440,668	+		DZA65_RS20580	0.79	-0.5
4,440,669	-		DZA65_RS20580	0.79	-0.2
4,440,769	+				-2.3
4,440,770	-				-1.5
4,440,770	-				-0.6
4,440,770	-				-2.2
4,440,770	-				-1.0
4,440,810	+				-2.6
4,440,811	-				+0.0
4,440,811	-				+0.3
4,440,811	-				-0.1
4,440,834	+				+0.3
4,440,890	+				-1.5
4,440,891	-				-0.3
4,440,904	+				-0.7
4,440,904	+				-0.5
4,440,904	+				+0.3
4,440,905	-				-0.6
4,440,905	-				-1.2
4,440,905	-				+0.1
4,440,907	+				-0.3
4,440,907	+				-1.0
4,440,907	+				-2.1
4,440,907	+				-0.3
4,440,907	+				-0.6
4,440,907	+				+1.0
4,440,907	+				+0.3
4,440,907	+				+0.1
4,440,907	+				-1.3
4,440,907	+				+1.9
4,440,908	-				-1.7
4,440,908	-				-1.2
4,440,908	-				-1.5
4,440,908	-				+0.1
4,440,908	-				-1.5
4,440,908	-				-0.3
4,440,908	-				-1.6
4,440,908	-				+0.2
4,440,908	-				-0.2
4,440,908	-				+0.5
4,440,908	-				+0.9
4,440,908	-				-0.3
4,440,908	-				+0.4
4,440,908	-				-0.5
4,440,908	-				-3.2
4,440,908	-				+0.4
4,440,908	-				-0.7
4,440,908	-				+1.2
4,440,908	-				-0.7
4,440,908	-				-0.0
4,440,908	-				+0.0
4,440,909	+				-1.3
4,440,909	+				-0.3
4,440,910	-				-1.0
4,440,910	-				+0.7
4,440,910	-				+0.9
4,440,910	-				-0.4
4,440,930	+				+0.1
4,440,930	+				-1.7
4,440,930	+				-0.3
4,440,930	+				+0.5
4,440,930	+				-0.9
4,440,930	+				-0.2
4,440,930	+				+1.0
4,440,930	+				-1.5
4,440,930	+				+0.8
4,440,930	+				+0.1
4,440,931	-				+1.7
4,440,931	-				-0.6
4,440,931	-				+0.6
4,440,931	-				+0.9
4,440,931	-				-1.9
4,440,931	-				-2.3
4,440,931	-				+0.0
4,440,931	-				-0.6
4,440,969	+				-0.1
4,440,969	+				-1.4
4,440,980	-				+0.3
4,440,980	-				-0.7
4,441,002	-				-2.0
4,441,005	-				-0.3
4,441,005	-				-0.0
4,441,274	+				-0.6
4,441,275	-				-2.0
4,441,277	+				+0.9
4,441,277	+				+0.5
4,441,278	-				+2.1
4,441,278	-				+0.9
4,441,278	-				+0.6
4,441,278	-				+0.2
4,441,286	+				-1.2
4,441,302	+				+0.3
4,441,302	+				+1.3
4,441,302	+				-0.5
4,441,303	-				-0.7
4,441,338	+				-0.3
4,441,338	+				+0.2
4,441,345	+				+0.7
4,441,413	+				+0.4
4,441,414	-				-0.3
4,441,446	-		DZA65_RS20590	0.10	-0.4
4,441,446	-		DZA65_RS20590	0.10	-1.3
4,441,464	+		DZA65_RS20590	0.12	+0.4
4,441,464	+		DZA65_RS20590	0.12	+0.6
4,441,464	+		DZA65_RS20590	0.12	+0.1
4,441,464	+		DZA65_RS20590	0.12	-0.7
4,441,464	+		DZA65_RS20590	0.12	-0.0
4,441,465	-		DZA65_RS20590	0.12	-0.0
4,441,556	+		DZA65_RS20590	0.21	-1.9
4,441,574	+		DZA65_RS20590	0.23	-0.7
4,441,575	-		DZA65_RS20590	0.23	+0.0
4,441,575	-		DZA65_RS20590	0.23	-0.3
4,441,779	+		DZA65_RS20590	0.42	-2.0
4,441,780	-		DZA65_RS20590	0.42	-2.3
4,441,780	-		DZA65_RS20590	0.42	-0.8