Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS15380

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
3,332,281	+		DZA65_RS15375	0.10	-1.1
3,332,296	-		DZA65_RS15375	0.12	+0.3
3,332,311	-		DZA65_RS15375	0.13	+0.9
3,332,446	+		DZA65_RS15375	0.27	+1.4
3,332,446	+		DZA65_RS15375	0.27	+0.1
3,332,446	+		DZA65_RS15375	0.27	-1.6
3,332,446	+		DZA65_RS15375	0.27	-1.5
3,332,446	+				-0.9
3,332,446	+		DZA65_RS15375	0.27	-0.5
3,332,447	-		DZA65_RS15375	0.27	-1.7
3,332,447	-		DZA65_RS15375	0.27	-0.4
3,332,447	-		DZA65_RS15375	0.27	-0.8
3,332,447	-		DZA65_RS15375	0.27	-0.4
3,332,447	-		DZA65_RS15375	0.27	-1.1
3,332,447	-		DZA65_RS15375	0.27	+0.9
3,332,447	-		DZA65_RS15375	0.27	-0.7
3,332,449	+		DZA65_RS15375	0.27	+1.1
3,332,449	+		DZA65_RS15375	0.27	-2.3
3,332,450	-		DZA65_RS15375	0.27	+0.2
3,332,450	-		DZA65_RS15375	0.27	+0.2
3,332,450	-		DZA65_RS15375	0.27	-0.0
3,332,466	-		DZA65_RS15375	0.29	+0.5
3,332,466	-		DZA65_RS15375	0.29	+0.5
3,332,466	-		DZA65_RS15375	0.29	+0.0
3,332,522	-		DZA65_RS15375	0.34	-1.3
3,332,522	-		DZA65_RS15375	0.34	-0.8
3,332,522	-		DZA65_RS15375	0.34	+0.1
3,332,522	-		DZA65_RS15375	0.34	+0.0
3,332,522	-		DZA65_RS15375	0.34	+0.1
3,332,671	+		DZA65_RS15375	0.49	-1.7
3,332,812	-		DZA65_RS15375	0.63	+0.7
3,332,821	-		DZA65_RS15375	0.64	+0.3
3,332,821	-		DZA65_RS15375	0.64	+0.3
3,333,040	-		DZA65_RS15375	0.85	-1.3
3,333,084	-		DZA65_RS15375	0.90	+0.9
3,333,084	-		DZA65_RS15375	0.90	-0.4
3,333,084	-		DZA65_RS15375	0.90	+1.7
3,333,208	-				+1.5
3,333,208	-				+1.4
3,333,214	+				+0.4
3,333,214	+				+0.1
3,333,214	+				+0.4
3,333,215	-				-0.1
3,333,215	-				-0.6
3,333,215	-				-1.9
3,333,215	-				+0.9
3,333,215	-				+0.8
3,333,250	-				-1.4
3,333,250	-				-1.1
3,333,273	+				-0.9
3,333,379	-				+0.3
3,333,456	+		DZA65_RS15380	0.16	-1.4
3,333,456	+		DZA65_RS15380	0.16	+0.2
3,333,456	+		DZA65_RS15380	0.16	-1.4
3,333,456	+		DZA65_RS15380	0.16	-2.1
3,333,456	+		DZA65_RS15380	0.16	-1.7
3,333,456	+		DZA65_RS15380	0.16	-1.4
3,333,456	+		DZA65_RS15380	0.16	-0.7
3,333,457	-		DZA65_RS15380	0.16	+1.7
3,333,457	-		DZA65_RS15380	0.16	-0.1
3,333,457	-		DZA65_RS15380	0.16	-0.1
3,333,457	-		DZA65_RS15380	0.16	+0.4
3,333,457	-		DZA65_RS15380	0.16	-2.3
3,333,457	-		DZA65_RS15380	0.16	-1.1
3,333,457	-		DZA65_RS15380	0.16	+0.3
3,333,631	+		DZA65_RS15380	0.32	-0.7
3,333,631	+		DZA65_RS15380	0.32	-0.6
3,333,631	+		DZA65_RS15380	0.32	-1.4
3,333,631	+		DZA65_RS15380	0.32	-1.9
3,333,631	+		DZA65_RS15380	0.32	-0.1
3,333,632	-		DZA65_RS15380	0.32	-0.7
3,333,633	+		DZA65_RS15380	0.32	+0.1
3,333,633	+		DZA65_RS15380	0.32	-0.3
3,333,633	+		DZA65_RS15380	0.32	-0.7
3,333,643	+		DZA65_RS15380	0.33	-0.7
3,333,802	+		DZA65_RS15380	0.47	-1.9
3,333,802	+		DZA65_RS15380	0.47	-0.9
3,333,858	+		DZA65_RS15380	0.52	-1.0
3,333,858	+		DZA65_RS15380	0.52	-1.4
3,334,055	-		DZA65_RS15380	0.69	+0.9
3,334,055	-		DZA65_RS15380	0.69	-1.9
3,334,113	+		DZA65_RS15380	0.74	-1.4
3,334,113	+		DZA65_RS15380	0.74	-1.4
3,334,113	+		DZA65_RS15380	0.74	-1.1
3,334,113	+		DZA65_RS15380	0.74	-2.4
3,334,114	-		DZA65_RS15380	0.74	-1.1
3,334,114	-		DZA65_RS15380	0.74	-2.1
3,334,114	-		DZA65_RS15380	0.74	-1.9
3,334,114	-				-0.1
3,334,114	-		DZA65_RS15380	0.74	-1.1
3,334,114	-		DZA65_RS15380	0.74	-0.7
3,334,374	+				+0.9
3,334,374	+				-1.7
3,334,381	+				-3.3
3,334,381	+				-1.6
3,334,421	-				+0.6
3,334,421	-				+0.5
3,334,466	+				-1.8
3,334,466	+				+1.2
3,334,466	+				-0.4
3,334,467	-				+0.9
3,334,467	-				-0.4
3,334,467	-				+0.3
3,334,554	+				+0.9
3,334,576	+				-1.0
3,334,576	+				+0.3
3,334,577	-				-0.2
3,334,582	-				+0.3
3,334,582	-				-0.7
3,334,582	-				-1.1
3,334,632	+				+0.9
3,334,632	+				-0.9
3,334,886	+		DZA65_RS15385	0.18	+0.7
3,334,886	+		DZA65_RS15385	0.18	+1.2
3,334,887	-		DZA65_RS15385	0.18	+1.0
3,334,905	+		DZA65_RS15385	0.19	+0.2
3,334,906	-		DZA65_RS15385	0.20	+1.0
3,334,906	-		DZA65_RS15385	0.20	-0.7
3,334,906	-		DZA65_RS15385	0.20	-0.1
3,334,906	-		DZA65_RS15385	0.20	+0.4
3,334,906	-		DZA65_RS15385	0.20	-0.2
3,334,906	-		DZA65_RS15385	0.20	+0.2
3,334,918	+		DZA65_RS15385	0.20	+0.3
3,334,919	-		DZA65_RS15385	0.20	+0.4
3,334,937	+		DZA65_RS15385	0.22	+0.2
3,334,938	-		DZA65_RS15385	0.22	-0.8
3,334,938	-		DZA65_RS15385	0.22	+1.8
3,334,938	-		DZA65_RS15385	0.22	-0.7
3,334,993	-		DZA65_RS15385	0.26	+1.2
3,335,146	+		DZA65_RS15385	0.37	-0.7
3,335,146	+		DZA65_RS15385	0.37	-0.4
3,335,146	+		DZA65_RS15385	0.37	-1.1
3,335,146	+		DZA65_RS15385	0.37	+1.1
3,335,146	+		DZA65_RS15385	0.37	+0.4
3,335,146	+		DZA65_RS15385	0.37	+1.1
3,335,146	+		DZA65_RS15385	0.37	-0.3
3,335,146	+		DZA65_RS15385	0.37	+0.6
3,335,146	+		DZA65_RS15385	0.37	-0.1
3,335,146	+		DZA65_RS15385	0.37	+0.9
3,335,146	+		DZA65_RS15385	0.37	-0.5
3,335,146	+		DZA65_RS15385	0.37	-0.2
3,335,147	-		DZA65_RS15385	0.37	+1.8
3,335,147	-		DZA65_RS15385	0.37	-1.0
3,335,147	-		DZA65_RS15385	0.37	-1.7
3,335,147	-		DZA65_RS15385	0.37	-0.0
3,335,147	-		DZA65_RS15385	0.37	-2.3
3,335,147	-		DZA65_RS15385	0.37	+0.2
3,335,170	+		DZA65_RS15385	0.39	-0.1
3,335,257	+		DZA65_RS15385	0.45	+1.3
3,335,257	+		DZA65_RS15385	0.45	-0.3
3,335,257	+		DZA65_RS15385	0.45	-0.7
3,335,257	+		DZA65_RS15385	0.45	+0.2
3,335,257	+		DZA65_RS15385	0.45	-0.1
3,335,258	-		DZA65_RS15385	0.45	+0.0
3,335,258	-		DZA65_RS15385	0.45	+0.1
3,335,323	+		DZA65_RS15385	0.49	+0.2
3,335,323	+		DZA65_RS15385	0.49	+0.4
3,335,324	-		DZA65_RS15385	0.50	+0.2
3,335,324	-		DZA65_RS15385	0.50	-0.9
3,335,325	+		DZA65_RS15385	0.50	-1.1
3,335,325	+		DZA65_RS15385	0.50	+0.5
3,335,326	-		DZA65_RS15385	0.50	-0.3