Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS15305

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
3,318,854	+				+0.9
3,318,854	+				-0.9
3,318,854	+				-0.4
3,318,855	-				+0.9
3,318,855	-				+2.5
3,318,855	-				-0.1
3,318,855	-				-0.6
3,318,855	-				-1.3
3,318,855	-				-0.6
3,318,855	-				+0.9
3,318,876	+				-0.9
3,318,963	+				-0.3
3,318,963	+				-0.9
3,318,963	+				-0.6
3,318,963	+				-0.4
3,318,963	+				-1.5
3,318,963	+				+0.1
3,318,963	+				+3.1
3,318,963	+				-0.4
3,318,963	+				+0.1
3,318,964	-				-0.4
3,318,964	-				-0.6
3,318,964	-				-0.1
3,318,964	-				-0.3
3,318,964	-				-0.7
3,318,964	-				-1.2
3,318,964	-				+0.2
3,318,964	-				+0.9
3,318,964	-				+0.1
3,318,964	-				+0.2
3,318,964	-				-0.3
3,318,966	+				-0.7
3,318,967	-				+0.0
3,318,967	-				-0.7
3,318,967	-				-3.3
3,318,967	-				-0.4
3,319,021	+		DZA65_RS15300	0.11	-0.6
3,319,021	+		DZA65_RS15300	0.11	-0.1
3,319,021	+		DZA65_RS15300	0.11	+0.9
3,319,021	+		DZA65_RS15300	0.11	+0.9
3,319,021	+		DZA65_RS15300	0.11	-1.4
3,319,022	-		DZA65_RS15300	0.11	+1.4
3,319,022	-		DZA65_RS15300	0.11	-0.7
3,319,022	-		DZA65_RS15300	0.11	+1.6
3,319,022	-		DZA65_RS15300	0.11	-0.4
3,319,022	-		DZA65_RS15300	0.11	-0.3
3,319,022	-		DZA65_RS15300	0.11	-0.4
3,319,022	-		DZA65_RS15300	0.11	-0.3
3,319,022	-		DZA65_RS15300	0.11	-0.4
3,319,022	-		DZA65_RS15300	0.11	-1.1
3,319,022	-		DZA65_RS15300	0.11	-0.1
3,319,022	-		DZA65_RS15300	0.11	+0.3
3,319,022	-		DZA65_RS15300	0.11	-0.4
3,319,026	+		DZA65_RS15300	0.12	-1.1
3,319,026	+		DZA65_RS15300	0.12	-1.3
3,319,026	+		DZA65_RS15300	0.12	+0.3
3,319,097	+		DZA65_RS15300	0.23	+0.4
3,319,182	+		DZA65_RS15300	0.37	+0.3
3,319,183	-		DZA65_RS15300	0.37	-0.3
3,319,183	-		DZA65_RS15300	0.37	-1.7
3,319,207	+		DZA65_RS15300	0.41	-0.6
3,319,208	-		DZA65_RS15300	0.41	+0.0
3,319,208	-		DZA65_RS15300	0.41	+0.1
3,319,223	-		DZA65_RS15300	0.43	-2.7
3,319,223	-		DZA65_RS15300	0.43	-0.8
3,319,238	+		DZA65_RS15300	0.46	+0.1
3,319,239	-		DZA65_RS15300	0.46	+0.9
3,319,311	+		DZA65_RS15300	0.57	-0.6
3,319,311	+		DZA65_RS15300	0.57	-1.2
3,319,312	-		DZA65_RS15300	0.57	-0.9
3,319,312	-		DZA65_RS15300	0.57	-1.1
3,319,332	+		DZA65_RS15300	0.60	+0.1
3,319,372	-		DZA65_RS15300	0.67	+0.3
3,319,426	-		DZA65_RS15300	0.75	-0.7
3,319,430	+		DZA65_RS15300	0.76	-1.4
3,319,430	+		DZA65_RS15300	0.76	-1.3
3,319,430	+		DZA65_RS15300	0.76	-0.3
3,319,430	+		DZA65_RS15300	0.76	-0.7
3,319,430	+		DZA65_RS15300	0.76	-0.8
3,319,431	-		DZA65_RS15300	0.76	-0.1
3,319,431	-		DZA65_RS15300	0.76	-1.8
3,319,445	+		DZA65_RS15300	0.78	-0.3
3,319,445	+		DZA65_RS15300	0.78	+0.6
3,319,445	+		DZA65_RS15300	0.78	-2.0
3,319,445	+		DZA65_RS15300	0.78	+0.3
3,319,445	+		DZA65_RS15300	0.78	+0.6
3,319,445	+		DZA65_RS15300	0.78	-0.9
3,319,445	+		DZA65_RS15300	0.78	+3.5
3,319,445	+		DZA65_RS15300	0.78	-1.0
3,319,445	+		DZA65_RS15300	0.78	-1.9
3,319,446	-		DZA65_RS15300	0.79	+0.4
3,319,446	-		DZA65_RS15300	0.79	-0.4
3,319,446	-		DZA65_RS15300	0.79	+0.3
3,319,446	-		DZA65_RS15300	0.79	+1.1
3,319,446	-		DZA65_RS15300	0.79	-0.4
3,319,446	-		DZA65_RS15300	0.79	+0.4
3,319,446	-		DZA65_RS15300	0.79	+0.6
3,319,446	-		DZA65_RS15300	0.79	-0.6
3,319,446	-		DZA65_RS15300	0.79	-1.1
3,319,446	-		DZA65_RS15300	0.79	+0.5
3,319,446	-		DZA65_RS15300	0.79	-0.7
3,319,446	-		DZA65_RS15300	0.79	+0.3
3,319,446	-		DZA65_RS15300	0.79	-0.1
3,319,449	+		DZA65_RS15300	0.79	-1.4
3,319,449	+		DZA65_RS15300	0.79	-0.9
3,319,449	+		DZA65_RS15300	0.79	+0.3
3,319,449	+		DZA65_RS15300	0.79	+1.1
3,319,450	-		DZA65_RS15300	0.79	-1.3
3,319,450	-		DZA65_RS15300	0.79	-2.1
3,319,450	-		DZA65_RS15300	0.79	-0.2
3,319,526	+				-0.3
3,319,557	+				+0.5
3,319,557	+				-0.7
3,319,558	-				-1.4
3,319,645	+				+0.3
3,319,646	-				-0.1
3,319,703	+				+0.3
3,319,726	-				+0.2
3,319,728	+				-0.7
3,319,729	-				-0.3
3,319,756	+				-0.5
3,319,756	+				-1.4
3,319,756	+				-0.3
3,319,756	+				+0.1
3,319,756	+				+1.6
3,319,756	+				-0.4
3,319,756	+				-0.1
3,319,756	+				-0.7
3,319,756	+				+2.1
3,319,756	+				+0.4
3,319,756	+				-2.0
3,319,756	+				+1.6
3,319,756	+				+0.1
3,319,757	-				-1.4
3,319,757	-				+0.4
3,319,757	-				-1.3
3,319,757	-				+0.9
3,319,757	-				-2.1
3,319,757	-				-0.2
3,319,757	-				-0.7
3,319,757	-				-1.9
3,319,757	-				-0.3
3,319,797	+				+0.8
3,319,798	-				-0.1
3,319,833	+				-1.4
3,319,833	+				-1.2
3,319,834	-				-2.3
3,319,834	-				-0.4
3,319,850	+				-0.0
3,319,850	+				+0.4
3,319,850	+				-1.4
3,319,851	-				-0.0
3,319,851	-				-1.0
3,319,858	+				+0.3
3,319,858	+				-1.7
3,319,859	-				-1.2
3,319,859	-				-0.0
3,319,883	+				-1.1
3,319,884	-				-0.5
3,319,930	+				-0.1
3,319,937	-				-0.2
3,319,989	+		DZA65_RS15305	0.15	-0.4
3,319,990	-		DZA65_RS15305	0.15	+1.1
3,320,120	+		DZA65_RS15305	0.30	+0.2
3,320,135	-		DZA65_RS15305	0.31	-0.5
3,320,153	+		DZA65_RS15305	0.33	-0.4
3,320,154	-		DZA65_RS15305	0.33	-1.1
3,320,200	-		DZA65_RS15305	0.38	-0.1
3,320,344	+		DZA65_RS15305	0.54	+2.1
3,320,344	+		DZA65_RS15305	0.54	+1.3
3,320,344	+		DZA65_RS15305	0.54	-0.6
3,320,344	+		DZA65_RS15305	0.54	-1.4
3,320,344	+		DZA65_RS15305	0.54	-1.9
3,320,344	+		DZA65_RS15305	0.54	+0.6
3,320,345	-		DZA65_RS15305	0.54	-0.3
3,320,345	-		DZA65_RS15305	0.54	+0.6
3,320,345	-		DZA65_RS15305	0.54	+0.9
3,320,345	-		DZA65_RS15305	0.54	+1.4
3,320,433	+		DZA65_RS15305	0.64	-0.7
3,320,433	+		DZA65_RS15305	0.64	+1.3
3,320,433	+		DZA65_RS15305	0.64	-0.8
3,320,433	+		DZA65_RS15305	0.64	+0.0
3,320,434	-		DZA65_RS15305	0.64	-0.3
3,320,434	-		DZA65_RS15305	0.64	-2.3
3,320,471	+		DZA65_RS15305	0.68	+0.1
3,320,478	+		DZA65_RS15305	0.69	-0.7
3,320,479	-		DZA65_RS15305	0.69	+0.3
3,320,479	-		DZA65_RS15305	0.69	+1.2
3,320,536	+		DZA65_RS15305	0.75	+0.5
3,320,537	-		DZA65_RS15305	0.75	-1.1
3,320,540	+		DZA65_RS15305	0.76	-0.3
3,320,802	+				+1.3
3,320,803	-				-0.2
3,320,803	-				+0.3
3,320,969	-		DZA65_RS15310	0.22	+0.0
3,321,166	+		DZA65_RS15310	0.47	+0.9
3,321,167	-		DZA65_RS15310	0.47	-0.0
3,321,171	+		DZA65_RS15310	0.48	-0.3
3,321,172	-		DZA65_RS15310	0.48	-2.0
3,321,172	-		DZA65_RS15310	0.48	-1.1
3,321,172	-		DZA65_RS15310	0.48	-1.2
3,321,172	-		DZA65_RS15310	0.48	-0.5
3,321,284	+		DZA65_RS15310	0.62	-0.7
3,321,284	+		DZA65_RS15310	0.62	+0.6
3,321,284	+		DZA65_RS15310	0.62	-0.4
3,321,285	-		DZA65_RS15310	0.63	-0.9
3,321,285	-		DZA65_RS15310	0.63	-0.7
3,321,285	-		DZA65_RS15310	0.63	-0.5
3,321,314	+		DZA65_RS15310	0.66	-0.7
3,321,314	+		DZA65_RS15310	0.66	-0.6
3,321,315	-		DZA65_RS15310	0.66	+0.7
3,321,315	-		DZA65_RS15310	0.66	-0.9
3,321,315	-		DZA65_RS15310	0.66	+0.9
3,321,315	-		DZA65_RS15310	0.66	-0.2
3,321,315	-		DZA65_RS15310	0.66	+0.9
3,321,332	+		DZA65_RS15310	0.69	-1.7
3,321,332	+		DZA65_RS15310	0.69	-1.2
3,321,333	-		DZA65_RS15310	0.69	+0.9
3,321,333	-		DZA65_RS15310	0.69	+0.6
3,321,424	+		DZA65_RS15310	0.80	+0.1
3,321,424	+		DZA65_RS15310	0.80	-0.6
3,321,424	+		DZA65_RS15310	0.80	-0.4
3,321,425	-		DZA65_RS15310	0.81	-0.2
3,321,425	-		DZA65_RS15310	0.81	-0.2
3,321,425	-		DZA65_RS15310	0.81	-0.4
3,321,475	+		DZA65_RS15310	0.87	-0.4
3,321,476	-		DZA65_RS15310	0.87	+0.3
3,321,476	-		DZA65_RS15310	0.87	-0.4
3,321,476	-		DZA65_RS15310	0.87	-2.1
3,321,476	-		DZA65_RS15310	0.87	-1.9
3,321,476	-		DZA65_RS15310	0.87	-0.6
3,321,490	+		DZA65_RS15310	0.89	-0.7
3,321,490	+		DZA65_RS15310	0.89	+0.0
3,321,538	+				+0.9
3,321,538	+				-1.8
3,321,538	+				-2.0
3,321,538	+				-1.1
3,321,538	+				-0.5
3,321,538	+				+0.2
3,321,539	-				+1.1
3,321,539	-				-1.1
3,321,539	-				+0.6
3,321,542	+				-1.1
3,321,542	+				-0.7
3,321,542	+				-1.0
3,321,542	+				-1.0
3,321,542	+				-2.1
3,321,542	+				+0.2
3,321,542	+				+0.3
3,321,542	+				+0.3
3,321,542	+				-0.1
3,321,542	+				+0.2
3,321,542	+				+0.6
3,321,543	-				+0.1
3,321,543	-				-0.3
3,321,543	-				-0.3
3,321,543	-				-0.7
3,321,543	-				-0.9
3,321,543	-				-0.4
3,321,562	+				+0.2
3,321,563	-				-1.9
3,321,563	-				-1.4
3,321,565	+				+1.1
3,321,565	+				+0.2
3,321,565	+				+0.4
3,321,565	+				-0.1
3,321,565	+				-0.7
3,321,565	+				-1.1
3,321,566	-				+0.7
3,321,595	-				-0.6
3,321,598	+				+1.2
3,321,599	-				-2.1
3,321,599	-				+0.0
3,321,701	+		DZA65_RS15315	0.12	+1.0
3,321,701	+		DZA65_RS15315	0.12	-2.1
3,321,701	+		DZA65_RS15315	0.12	+0.2
3,321,701	+		DZA65_RS15315	0.12	-2.7
3,321,701	+		DZA65_RS15315	0.12	+1.0
3,321,701	+		DZA65_RS15315	0.12	+0.3
3,321,702	-		DZA65_RS15315	0.12	-1.1
3,321,702	-		DZA65_RS15315	0.12	-0.1
3,321,702	-		DZA65_RS15315	0.12	+0.1
3,321,702	-		DZA65_RS15315	0.12	-1.4
3,321,702	-		DZA65_RS15315	0.12	+0.6
3,321,702	-		DZA65_RS15315	0.12	-1.1
3,321,729	-		DZA65_RS15315	0.16	+0.9
3,321,729	-		DZA65_RS15315	0.16	-0.1
3,321,738	+		DZA65_RS15315	0.17	+0.2
3,321,738	+		DZA65_RS15315	0.17	-1.0
3,321,738	+				+0.5
3,321,740	+		DZA65_RS15315	0.18	+0.3
3,321,740	+		DZA65_RS15315	0.18	-0.1
3,321,740	+		DZA65_RS15315	0.18	-1.1
3,321,740	+		DZA65_RS15315	0.18	+0.3
3,321,740	+		DZA65_RS15315	0.18	-0.3
3,321,740	+		DZA65_RS15315	0.18	+0.5
3,321,740	+		DZA65_RS15315	0.18	+0.2
3,321,740	+		DZA65_RS15315	0.18	-0.1
3,321,740	+		DZA65_RS15315	0.18	+1.4
3,321,740	+		DZA65_RS15315	0.18	-1.9
3,321,741	-		DZA65_RS15315	0.18	+0.1
3,321,741	-		DZA65_RS15315	0.18	-1.9
3,321,741	-		DZA65_RS15315	0.18	+0.4
3,321,741	-		DZA65_RS15315	0.18	-0.2
3,321,741	-		DZA65_RS15315	0.18	-1.1
3,321,741	-		DZA65_RS15315	0.18	-0.7
3,321,754	-		DZA65_RS15315	0.20	-1.6
3,321,754	-		DZA65_RS15315	0.20	-1.3
3,321,756	+		DZA65_RS15315	0.20	+0.9
3,321,756	+		DZA65_RS15315	0.20	+0.1
3,321,757	-		DZA65_RS15315	0.20	+1.5