Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS14570

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
3,171,891	+		DZA65_RS14560	0.88	-0.1
3,171,891	+		DZA65_RS14560	0.88	-0.4
3,171,891	+		DZA65_RS14560	0.88	-0.6
3,171,892	-		DZA65_RS14560	0.89	+0.3
3,171,906	+				-0.7
3,171,906	+				+0.4
3,171,907	-				-1.5
3,171,907	-				+3.6
3,171,919	+				+1.8
3,171,919	+				-1.2
3,171,929	-				+0.1
3,171,944	+				-2.0
3,171,944	+				-0.2
3,171,944	+				-0.8
3,171,945	-				+1.0
3,171,945	-				+0.0
3,171,945	-				-1.0
3,171,945	-				-0.8
3,171,945	-				-2.5
3,171,945	-				-1.2
3,171,946	+				-0.9
3,171,946	+				-1.8
3,171,946	+				-0.2
3,171,947	-				-0.2
3,171,947	-				+0.0
3,171,947	-				+0.6
3,171,947	-				+0.3
3,171,949	+				-0.6
3,171,949	+				-0.4
3,171,949	+				-0.8
3,171,949	+				-0.5
3,171,950	-				-0.2
3,171,950	-				-1.5
3,171,950	-				-0.1
3,171,950	-				+0.4
3,171,950	-				-0.3
3,171,950	-				-1.2
3,171,951	+				-2.0
3,171,951	+				-0.5
3,171,951	+				-1.0
3,171,952	-				-0.1
3,171,971	+				+0.2
3,171,972	-				-0.5
3,171,979	+				+0.3
3,171,980	-				-0.6
3,171,992	+				+0.0
3,171,995	+				+0.0
3,171,995	+				-1.8
3,171,995	+				+1.2
3,171,995	+				-0.4
3,172,045	+				+1.4
3,172,045	+				-1.3
3,172,046	-				-0.2
3,172,097	+		DZA65_RS14565	0.15	+0.2
3,172,097	+		DZA65_RS14565	0.15	-1.2
3,172,098	-		DZA65_RS14565	0.15	+0.5
3,172,117	+		DZA65_RS14565	0.18	-0.8
3,172,118	-		DZA65_RS14565	0.18	-0.2
3,172,138	+		DZA65_RS14565	0.21	+0.4
3,172,138	+		DZA65_RS14565	0.21	+0.0
3,172,138	+		DZA65_RS14565	0.21	-1.3
3,172,138	+		DZA65_RS14565	0.21	-2.2
3,172,139	-		DZA65_RS14565	0.21	+1.2
3,172,141	+		DZA65_RS14565	0.21	+0.4
3,172,162	-		DZA65_RS14565	0.24	+3.1
3,172,173	+				-0.2
3,172,230	+		DZA65_RS14565	0.34	-1.8
3,172,230	+		DZA65_RS14565	0.34	-0.6
3,172,230	+		DZA65_RS14565	0.34	+0.4
3,172,231	-		DZA65_RS14565	0.34	+1.3
3,172,231	-		DZA65_RS14565	0.34	+0.1
3,172,231	-		DZA65_RS14565	0.34	-0.3
3,172,277	-		DZA65_RS14565	0.40	-2.0
3,172,280	-		DZA65_RS14565	0.41	-0.7
3,172,280	-		DZA65_RS14565	0.41	+0.0
3,172,282	+		DZA65_RS14565	0.41	-0.1
3,172,282	+		DZA65_RS14565	0.41	-0.0
3,172,282	+		DZA65_RS14565	0.41	-0.3
3,172,282	+		DZA65_RS14565	0.41	-1.8
3,172,282	+		DZA65_RS14565	0.41	+0.0
3,172,282	+		DZA65_RS14565	0.41	-0.4
3,172,283	-		DZA65_RS14565	0.41	+0.8
3,172,283	-		DZA65_RS14565	0.41	+0.0
3,172,283	-		DZA65_RS14565	0.41	-2.2
3,172,283	-		DZA65_RS14565	0.41	+0.3
3,172,283	-		DZA65_RS14565	0.41	-1.7
3,172,283	-		DZA65_RS14565	0.41	-1.1
3,172,283	-		DZA65_RS14565	0.41	-1.0
3,172,283	-		DZA65_RS14565	0.41	+0.4
3,172,309	-		DZA65_RS14565	0.45	-0.7
3,172,314	+		DZA65_RS14565	0.46	-0.1
3,172,331	-		DZA65_RS14565	0.48	-0.5
3,172,407	+		DZA65_RS14565	0.59	+0.6
3,172,408	-		DZA65_RS14565	0.59	-1.2
3,172,409	+		DZA65_RS14565	0.59	-0.9
3,172,409	+		DZA65_RS14565	0.59	-0.7
3,172,409	+		DZA65_RS14565	0.59	+0.2
3,172,409	+		DZA65_RS14565	0.59	-1.8
3,172,409	+		DZA65_RS14565	0.59	-2.4
3,172,409	+		DZA65_RS14565	0.59	-0.1
3,172,409	+		DZA65_RS14565	0.59	-0.8
3,172,409	+		DZA65_RS14565	0.59	-0.8
3,172,410	-		DZA65_RS14565	0.60	+0.1
3,172,410	-		DZA65_RS14565	0.60	+0.3
3,172,410	-		DZA65_RS14565	0.60	+1.7
3,172,410	-		DZA65_RS14565	0.60	+0.5
3,172,462	+		DZA65_RS14565	0.67	-1.2
3,172,462	+		DZA65_RS14565	0.67	+0.1
3,172,462	+		DZA65_RS14565	0.67	+0.8
3,172,462	+		DZA65_RS14565	0.67	-1.2
3,172,463	-		DZA65_RS14565	0.67	-0.2
3,172,463	-		DZA65_RS14565	0.67	-1.0
3,172,463	-		DZA65_RS14565	0.67	-0.6
3,172,463	-		DZA65_RS14565	0.67	+0.3
3,172,509	+		DZA65_RS14565	0.74	+0.1
3,172,510	-		DZA65_RS14565	0.74	+0.1
3,172,510	-		DZA65_RS14565	0.74	+0.7
3,172,510	-		DZA65_RS14565	0.74	+0.3
3,172,510	-		DZA65_RS14565	0.74	+0.4
3,172,510	-		DZA65_RS14565	0.74	+0.2
3,172,510	-		DZA65_RS14565	0.74	-0.6
3,172,510	-		DZA65_RS14565	0.74	+0.8
3,172,564	+		DZA65_RS14565	0.82	+0.8
3,172,565	-		DZA65_RS14565	0.82	-0.4
3,172,578	+		DZA65_RS14565	0.84	-0.4
3,172,578	+		DZA65_RS14565	0.84	-1.5
3,172,578	+		DZA65_RS14565	0.84	-0.8
3,172,579	-		DZA65_RS14565	0.84	-0.2
3,172,579	-		DZA65_RS14565	0.84	-1.5
3,172,582	+		DZA65_RS14565	0.84	+0.6
3,172,583	-		DZA65_RS14565	0.84	-0.1
3,172,609	-		DZA65_RS14565	0.88	-1.0
3,172,641	+				+0.2
3,172,649	+				-0.4
3,172,649	+				-0.2
3,172,649	+				-1.1
3,172,650	-				-0.5
3,172,650	-				+0.5
3,172,650	-				-0.9
3,172,650	-				-0.4
3,172,650	-				+0.2
3,172,650	-				-1.8
3,172,678	+				-0.8
3,172,678	+				-0.9
3,172,679	-				-0.6
3,172,679	-				-1.2
3,172,679	-				-0.4
3,172,777	+				-0.8
3,172,777	+				-0.4
3,172,781	-				-0.6
3,172,781	-				-1.4
3,172,805	+				-0.2
3,172,805	+				-0.4
3,172,806	-				+0.4
3,172,806	-				-0.8
3,172,850	+				+1.4
3,172,851	-				+0.5
3,172,869	+		DZA65_RS14570	0.10	+0.1
3,172,869	+		DZA65_RS14570	0.10	+0.2
3,172,869	+		DZA65_RS14570	0.10	+0.2
3,172,869	+		DZA65_RS14570	0.10	-0.2
3,172,910	+		DZA65_RS14570	0.16	+0.8
3,172,911	-		DZA65_RS14570	0.16	+0.3
3,172,911	-		DZA65_RS14570	0.16	-0.4
3,172,911	-		DZA65_RS14570	0.16	+1.4
3,172,923	+		DZA65_RS14570	0.18	-0.4
3,172,923	+		DZA65_RS14570	0.18	-2.0
3,172,924	-		DZA65_RS14570	0.18	+1.8
3,172,928	+		DZA65_RS14570	0.19	+0.6
3,172,934	+		DZA65_RS14570	0.20	-1.6
3,172,934	+		DZA65_RS14570	0.20	-0.2
3,172,935	-		DZA65_RS14570	0.20	-0.7
3,172,935	-		DZA65_RS14570	0.20	-0.1
3,172,935	-		DZA65_RS14570	0.20	-0.9
3,172,943	+		DZA65_RS14570	0.21	-1.2
3,172,988	+		DZA65_RS14570	0.28	-0.3
3,172,988	+		DZA65_RS14570	0.28	-0.5
3,172,989	-		DZA65_RS14570	0.28	-1.3
3,173,012	+		DZA65_RS14570	0.31	-0.4
3,173,012	+		DZA65_RS14570	0.31	-1.2
3,173,012	+		DZA65_RS14570	0.31	-2.2
3,173,012	+		DZA65_RS14570	0.31	-1.0
3,173,012	+		DZA65_RS14570	0.31	-1.3
3,173,012	+		DZA65_RS14570	0.31	-1.4
3,173,013	-		DZA65_RS14570	0.31	-2.5
3,173,013	-		DZA65_RS14570	0.31	+0.8
3,173,030	+		DZA65_RS14570	0.34	-1.0
3,173,030	+		DZA65_RS14570	0.34	-1.3
3,173,030	+		DZA65_RS14570	0.34	-0.4
3,173,031	-		DZA65_RS14570	0.34	+0.8
3,173,031	-		DZA65_RS14570	0.34	+0.5
3,173,031	-		DZA65_RS14570	0.34	-0.1
3,173,089	+		DZA65_RS14570	0.42	-0.2
3,173,089	+		DZA65_RS14570	0.42	+1.0
3,173,089	+		DZA65_RS14570	0.42	-0.0
3,173,090	-		DZA65_RS14570	0.43	+0.0
3,173,090	-		DZA65_RS14570	0.43	+0.4
3,173,092	+		DZA65_RS14570	0.43	-1.0
3,173,092	+		DZA65_RS14570	0.43	-0.9
3,173,092	+		DZA65_RS14570	0.43	-1.1
3,173,092	+		DZA65_RS14570	0.43	-2.2
3,173,092	+		DZA65_RS14570	0.43	-0.8
3,173,092	+		DZA65_RS14570	0.43	-0.6
3,173,092	+		DZA65_RS14570	0.43	-1.4
3,173,093	-		DZA65_RS14570	0.43	-0.1
3,173,105	+		DZA65_RS14570	0.45	+0.6
3,173,106	-		DZA65_RS14570	0.45	-0.8
3,173,106	-		DZA65_RS14570	0.45	-1.4
3,173,127	+		DZA65_RS14570	0.48	+0.0
3,173,127	+		DZA65_RS14570	0.48	-0.1
3,173,128	-		DZA65_RS14570	0.48	+0.0
3,173,128	-		DZA65_RS14570	0.48	-0.1
3,173,128	-		DZA65_RS14570	0.48	-0.1
3,173,128	-		DZA65_RS14570	0.48	-0.9
3,173,131	-		DZA65_RS14570	0.49	-2.2
3,173,131	-		DZA65_RS14570	0.49	-0.8
3,173,131	-		DZA65_RS14570	0.49	-0.0
3,173,136	+		DZA65_RS14570	0.49	-0.3
3,173,137	-		DZA65_RS14570	0.50	+0.8
3,173,137	-		DZA65_RS14570	0.50	-2.0
3,173,137	-		DZA65_RS14570	0.50	-0.2
3,173,144	+		DZA65_RS14570	0.51	+1.0
3,173,229	+		DZA65_RS14570	0.63	-1.0
3,173,229	+		DZA65_RS14570	0.63	-0.6
3,173,229	+		DZA65_RS14570	0.63	-0.7
3,173,229	+		DZA65_RS14570	0.63	-0.1
3,173,230	-		DZA65_RS14570	0.63	+0.8
3,173,240	-		DZA65_RS14570	0.65	+0.5
3,173,240	-		DZA65_RS14570	0.65	-0.1
3,173,333	+		DZA65_RS14570	0.78	-1.9
3,173,333	+		DZA65_RS14570	0.78	-0.7
3,173,333	+		DZA65_RS14570	0.78	+0.9
3,173,333	+		DZA65_RS14570	0.78	-1.5
3,173,333	+		DZA65_RS14570	0.78	+0.8
3,173,333	+		DZA65_RS14570	0.78	-0.1
3,173,333	+		DZA65_RS14570	0.78	+0.2
3,173,334	-		DZA65_RS14570	0.79	-0.4
3,173,334	-		DZA65_RS14570	0.79	-1.5
3,173,334	-		DZA65_RS14570	0.79	+0.3
3,173,334	-				+1.8
3,173,334	-		DZA65_RS14570	0.79	+0.2
3,173,334	-		DZA65_RS14570	0.79	-0.9
3,173,334	-		DZA65_RS14570	0.79	-2.7
3,173,351	+		DZA65_RS14570	0.81	+0.9
3,173,391	+		DZA65_RS14570	0.87	+0.4
3,173,391	+		DZA65_RS14570	0.87	-0.3
3,173,391	+		DZA65_RS14570	0.87	-1.6
3,173,391	+		DZA65_RS14570	0.87	-0.4
3,173,391	+		DZA65_RS14570	0.87	-0.9
3,173,392	-		DZA65_RS14570	0.87	-0.7
3,173,392	-		DZA65_RS14570	0.87	+0.4
3,173,392	-		DZA65_RS14570	0.87	+0.6
3,173,392	-		DZA65_RS14570	0.87	-0.6
3,173,404	+		DZA65_RS14570	0.89	-2.1
3,173,423	+				-0.5
3,173,423	+				-0.1
3,173,423	+				-1.2
3,173,424	-				-0.2
3,173,424	-				-0.6
3,173,424	-				+0.3
3,173,447	+				+0.3
3,173,447	+				+1.5
3,173,447	+				-0.8
3,173,447	+				-1.8
3,173,447	+				+1.5
3,173,447	+				-0.9
3,173,447	+				-1.3
3,173,447	+				+0.4
3,173,448	-				-0.5
3,173,476	+				-0.4
3,173,493	+				-1.0
3,173,493	+				-1.4
3,173,493	+				-0.8
3,173,493	+				-0.1
3,173,494	-				-2.7
3,173,522	-				-0.0
3,173,554	-				-2.4
3,173,565	-				-0.9
3,173,578	+				-1.8
3,173,579	-				-0.2
3,173,579	-				-2.2
3,173,614	+				-1.2
3,173,615	-				-1.2
3,173,615	-				+0.2
3,173,650	+				-0.4
3,173,650	+				-0.5
3,173,650	+				-1.5
3,173,651	-				+0.9
3,173,651	-				-1.1
3,173,666	+		DZA65_RS14575	0.14	-0.5
3,173,667	-		DZA65_RS14575	0.14	-0.5
3,173,733	-		DZA65_RS14575	0.31	+1.3
3,173,734	+		DZA65_RS14575	0.31	+0.5
3,173,734	+		DZA65_RS14575	0.31	-1.0
3,173,734	+		DZA65_RS14575	0.31	+0.0
3,173,735	-		DZA65_RS14575	0.31	+0.0
3,173,746	+		DZA65_RS14575	0.34	-1.5
3,173,747	-		DZA65_RS14575	0.34	-0.0
3,173,767	+		DZA65_RS14575	0.39	+0.0
3,173,767	+		DZA65_RS14575	0.39	-0.8
3,173,767	+		DZA65_RS14575	0.39	+1.2
3,173,767	+		DZA65_RS14575	0.39	+2.1
3,173,767	+		DZA65_RS14575	0.39	+2.5
3,173,767	+		DZA65_RS14575	0.39	+0.2
3,173,767	+		DZA65_RS14575	0.39	+0.0
3,173,767	+		DZA65_RS14575	0.39	+0.9
3,173,767	+		DZA65_RS14575	0.39	-0.9
3,173,767	+		DZA65_RS14575	0.39	+2.0
3,173,767	+		DZA65_RS14575	0.39	-0.5
3,173,767	+		DZA65_RS14575	0.39	+0.2
3,173,767	+		DZA65_RS14575	0.39	-0.4
3,173,767	+		DZA65_RS14575	0.39	+0.9
3,173,767	+		DZA65_RS14575	0.39	+0.2
3,173,767	+		DZA65_RS14575	0.39	-0.0
3,173,767	+		DZA65_RS14575	0.39	+0.4
3,173,768	-		DZA65_RS14575	0.40	-1.5
3,173,768	-		DZA65_RS14575	0.40	-0.2
3,173,768	-		DZA65_RS14575	0.40	+0.5
3,173,768	-		DZA65_RS14575	0.40	-0.2
3,173,768	-		DZA65_RS14575	0.40	-0.4
3,173,772	-		DZA65_RS14575	0.41	+0.8
3,173,772	-		DZA65_RS14575	0.41	+0.3
3,173,789	+		DZA65_RS14575	0.45	-2.0
3,173,789	+		DZA65_RS14575	0.45	-0.1
3,173,789	+		DZA65_RS14575	0.45	-0.4
3,173,790	-				+1.6
3,173,790	-		DZA65_RS14575	0.45	-0.4
3,173,790	-		DZA65_RS14575	0.45	+0.5
3,173,790	-		DZA65_RS14575	0.45	-0.7
3,173,790	-		DZA65_RS14575	0.45	+1.6
3,173,790	-		DZA65_RS14575	0.45	-0.2
3,173,790	-				-0.5
3,173,806	+		DZA65_RS14575	0.49	+0.4
3,173,806	+		DZA65_RS14575	0.49	-0.8
3,173,822	+		DZA65_RS14575	0.54	+0.9
3,173,838	+		DZA65_RS14575	0.58	-0.2
3,173,838	+		DZA65_RS14575	0.58	+0.8
3,173,838	+		DZA65_RS14575	0.58	-0.5
3,173,838	+		DZA65_RS14575	0.58	-1.3
3,173,838	+		DZA65_RS14575	0.58	+0.3
3,173,839	-		DZA65_RS14575	0.58	-0.3
3,173,839	-		DZA65_RS14575	0.58	-1.1
3,173,839	-				-1.2
3,173,839	-		DZA65_RS14575	0.58	+0.4
3,173,839	-		DZA65_RS14575	0.58	-0.8
3,173,851	-		DZA65_RS14575	0.61	-1.1
3,173,869	+		DZA65_RS14575	0.66	-0.3
3,173,869	+		DZA65_RS14575	0.66	+0.2
3,173,869	+		DZA65_RS14575	0.66	-0.6
3,173,869	+		DZA65_RS14575	0.66	-1.2
3,173,869	+		DZA65_RS14575	0.66	-1.2
3,173,869	+		DZA65_RS14575	0.66	-0.6
3,173,870	-		DZA65_RS14575	0.66	-0.1
3,173,870	-		DZA65_RS14575	0.66	-1.7
3,173,870	-		DZA65_RS14575	0.66	-0.2
3,173,870	-		DZA65_RS14575	0.66	-0.4
3,173,870	-		DZA65_RS14575	0.66	-0.7
3,173,870	-		DZA65_RS14575	0.66	-0.1
3,173,870	-		DZA65_RS14575	0.66	-0.3
3,173,882	-		DZA65_RS14575	0.69	-0.9
3,173,882	-		DZA65_RS14575	0.69	-0.2
3,173,960	+		DZA65_RS14575	0.89	-0.2
3,173,960	+		DZA65_RS14575	0.89	-0.3
3,173,960	+		DZA65_RS14575	0.89	+0.4
3,173,960	+		DZA65_RS14575	0.89	+0.6
3,173,960	+		DZA65_RS14575	0.89	+0.2
3,173,960	+		DZA65_RS14575	0.89	-0.1
3,173,961	-		DZA65_RS14575	0.89	-2.4
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3,173,961	-		DZA65_RS14575	0.89	-0.2
3,173,961	-		DZA65_RS14575	0.89	-1.0
3,173,968	+				+0.0
3,173,968	+				+2.4
3,173,969	-				-0.4
3,173,969	-				-0.7
3,173,969	-				+1.2
3,173,980	-				+0.2
3,173,980	-				-0.6
3,173,982	-				-0.6
3,173,994	-				-0.9
3,173,994	-				+1.6
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3,174,004	-				+0.8
3,174,112	-		DZA65_RS14580	0.12	-1.5
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3,174,129	+		DZA65_RS14580	0.14	-1.7
3,174,130	-		DZA65_RS14580	0.14	+0.0
3,174,155	+		DZA65_RS14580	0.17	-1.2
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3,174,331	+		DZA65_RS14580	0.38	-0.2
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3,174,331	+		DZA65_RS14580	0.38	-0.4
3,174,331	+		DZA65_RS14580	0.38	-0.2
3,174,332	-		DZA65_RS14580	0.38	-0.1
3,174,332	-		DZA65_RS14580	0.38	-0.8
3,174,332	-		DZA65_RS14580	0.38	-0.5
3,174,332	-		DZA65_RS14580	0.38	-0.8
3,174,371	+		DZA65_RS14580	0.43	+0.4
3,174,371	+		DZA65_RS14580	0.43	+0.8
3,174,371	+		DZA65_RS14580	0.43	+0.5
3,174,372	-		DZA65_RS14580	0.43	-2.7
3,174,402	+		DZA65_RS14580	0.47	-0.6
3,174,430	+		DZA65_RS14580	0.50	-0.7
3,174,431	-		DZA65_RS14580	0.50	+0.0
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3,174,459	+		DZA65_RS14580	0.53	-1.0
3,174,460	-		DZA65_RS14580	0.53	+1.1
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