Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS14265

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
3,115,297	-				+0.2
3,115,297	-				-1.5
3,115,308	+				-0.0
3,115,309	-				+0.7
3,115,309	-				-1.5
3,115,309	-				+0.3
3,115,311	+				-2.4
3,115,311	+				-1.0
3,115,311	+				+0.3
3,115,311	+				-0.6
3,115,312	-				-0.3
3,115,312	-				-0.1
3,115,312	-				+0.3
3,115,312	-				-1.3
3,115,312	-				-0.6
3,115,325	-				+0.6
3,115,363	+				-0.9
3,115,364	-				-0.6
3,115,364	-				-0.3
3,115,364	-				+0.1
3,115,375	+				-0.5
3,115,375	+				+0.5
3,115,375	+				-1.1
3,115,375	+				-1.2
3,115,375	+				+0.1
3,115,376	-				-0.0
3,115,376	-				-1.3
3,115,376	-				+0.9
3,115,376	-				-0.3
3,115,462	-		DZA65_RS14260	0.21	-0.9
3,115,464	-		DZA65_RS14260	0.21	-0.4
3,115,464	-		DZA65_RS14260	0.21	-1.1
3,115,520	+		DZA65_RS14260	0.28	+0.4
3,115,520	+		DZA65_RS14260	0.28	+1.7
3,115,520	+		DZA65_RS14260	0.28	+0.7
3,115,520	+		DZA65_RS14260	0.28	+0.6
3,115,520	+		DZA65_RS14260	0.28	-1.3
3,115,521	-		DZA65_RS14260	0.28	+1.0
3,115,521	-		DZA65_RS14260	0.28	-1.1
3,115,583	-		DZA65_RS14260	0.36	+0.7
3,115,599	+		DZA65_RS14260	0.38	-2.6
3,115,599	+		DZA65_RS14260	0.38	-0.9
3,115,599	+		DZA65_RS14260	0.38	+0.3
3,115,599	+		DZA65_RS14260	0.38	-0.5
3,115,599	+		DZA65_RS14260	0.38	-0.0
3,115,600	-		DZA65_RS14260	0.38	+0.2
3,115,600	-		DZA65_RS14260	0.38	+0.1
3,115,600	-		DZA65_RS14260	0.38	+0.7
3,115,615	+		DZA65_RS14260	0.40	+0.2
3,115,615	+		DZA65_RS14260	0.40	-0.9
3,115,615	+		DZA65_RS14260	0.40	+0.1
3,115,615	+		DZA65_RS14260	0.40	-2.0
3,115,615	+		DZA65_RS14260	0.40	-0.9
3,115,615	+		DZA65_RS14260	0.40	-0.3
3,115,615	+		DZA65_RS14260	0.40	+1.0
3,115,615	+		DZA65_RS14260	0.40	-0.6
3,115,615	+		DZA65_RS14260	0.40	+0.1
3,115,615	+		DZA65_RS14260	0.40	+0.1
3,115,616	-		DZA65_RS14260	0.40	-0.7
3,115,616	-		DZA65_RS14260	0.40	-1.4
3,115,616	-		DZA65_RS14260	0.40	-0.9
3,115,616	-				+2.3
3,115,616	-		DZA65_RS14260	0.40	-0.3
3,115,616	-		DZA65_RS14260	0.40	-1.0
3,115,616	-		DZA65_RS14260	0.40	+0.9
3,115,616	-		DZA65_RS14260	0.40	-0.5
3,115,617	+		DZA65_RS14260	0.40	-1.1
3,115,617	+		DZA65_RS14260	0.40	+0.1
3,115,618	-		DZA65_RS14260	0.40	+0.7
3,115,618	-		DZA65_RS14260	0.40	+1.1
3,115,618	-		DZA65_RS14260	0.40	-0.3
3,115,618	-		DZA65_RS14260	0.40	-1.2
3,115,661	+		DZA65_RS14260	0.46	-0.0
3,115,661	+		DZA65_RS14260	0.46	-0.6
3,115,661	+		DZA65_RS14260	0.46	-1.1
3,115,662	-		DZA65_RS14260	0.46	+0.2
3,115,662	-		DZA65_RS14260	0.46	-0.5
3,115,662	-		DZA65_RS14260	0.46	-0.2
3,115,754	+		DZA65_RS14260	0.57	+1.3
3,115,754	+		DZA65_RS14260	0.57	-1.6
3,115,754	+		DZA65_RS14260	0.57	-0.7
3,115,754	+		DZA65_RS14260	0.57	-0.0
3,115,755	-		DZA65_RS14260	0.58	+0.1
3,115,755	-		DZA65_RS14260	0.58	-1.9
3,115,755	-		DZA65_RS14260	0.58	+0.1
3,115,769	+		DZA65_RS14260	0.59	+0.5
3,115,769	+		DZA65_RS14260	0.59	-1.2
3,115,770	-		DZA65_RS14260	0.59	-0.6
3,115,778	+		DZA65_RS14260	0.61	-1.1
3,115,779	-		DZA65_RS14260	0.61	-1.4
3,115,798	+		DZA65_RS14260	0.63	-0.9
3,115,798	+		DZA65_RS14260	0.63	-0.3
3,115,798	+		DZA65_RS14260	0.63	-1.9
3,115,798	+		DZA65_RS14260	0.63	-0.9
3,115,798	+		DZA65_RS14260	0.63	-2.6
3,115,798	+		DZA65_RS14260	0.63	+1.1
3,115,799	-		DZA65_RS14260	0.63	+0.5
3,115,799	-		DZA65_RS14260	0.63	-0.6
3,115,800	+		DZA65_RS14260	0.63	+0.7
3,115,800	+		DZA65_RS14260	0.63	-0.7
3,115,800	+		DZA65_RS14260	0.63	-0.5
3,115,801	-		DZA65_RS14260	0.63	+0.4
3,115,801	-		DZA65_RS14260	0.63	-0.0
3,115,801	-		DZA65_RS14260	0.63	-0.1
3,115,801	-		DZA65_RS14260	0.63	-1.6
3,115,801	-		DZA65_RS14260	0.63	-1.3
3,115,801	-				-1.6
3,115,801	-		DZA65_RS14260	0.63	+0.9
3,115,801	-		DZA65_RS14260	0.63	+0.3
3,115,801	-		DZA65_RS14260	0.63	-1.3
3,115,801	-		DZA65_RS14260	0.63	-0.1
3,115,864	+		DZA65_RS14260	0.71	+0.1
3,115,864	+		DZA65_RS14260	0.71	-1.2
3,115,901	+		DZA65_RS14260	0.76	+1.0
3,115,901	+		DZA65_RS14260	0.76	-0.6
3,115,901	+		DZA65_RS14260	0.76	-0.3
3,115,901	+		DZA65_RS14260	0.76	+0.3
3,115,901	+		DZA65_RS14260	0.76	-1.7
3,115,902	-		DZA65_RS14260	0.76	+0.7
3,115,902	-		DZA65_RS14260	0.76	+0.8
3,115,902	-		DZA65_RS14260	0.76	-2.3
3,115,902	-		DZA65_RS14260	0.76	-1.0
3,115,902	-		DZA65_RS14260	0.76	+0.1
3,115,942	+		DZA65_RS14260	0.81	+0.2
3,115,951	+		DZA65_RS14260	0.82	-0.6
3,115,951	+		DZA65_RS14260	0.82	+1.3
3,115,952	-		DZA65_RS14260	0.82	-0.9
3,115,952	-		DZA65_RS14260	0.82	-0.3
3,115,953	+		DZA65_RS14260	0.83	+0.7
3,115,953	+		DZA65_RS14260	0.83	-0.3
3,115,954	-		DZA65_RS14260	0.83	-0.5
3,115,954	-		DZA65_RS14260	0.83	-1.5
3,115,954	-		DZA65_RS14260	0.83	-0.4
3,116,126	+				-0.6
3,116,147	+				-1.1
3,116,148	-				-2.4
3,116,213	+		DZA65_RS14265	0.16	-1.1
3,116,214	-		DZA65_RS14265	0.16	-0.7
3,116,214	-		DZA65_RS14265	0.16	-0.3
3,116,214	-		DZA65_RS14265	0.16	-2.2
3,116,214	-		DZA65_RS14265	0.16	-0.6
3,116,223	+		DZA65_RS14265	0.17	-2.1
3,116,242	+		DZA65_RS14265	0.20	+0.3
3,116,243	-		DZA65_RS14265	0.20	-2.4
3,116,243	-				+2.7
3,116,245	-		DZA65_RS14265	0.20	-0.5
3,116,245	-		DZA65_RS14265	0.20	+0.3
3,116,245	-		DZA65_RS14265	0.20	-1.4
3,116,267	-		DZA65_RS14265	0.23	+1.2
3,116,275	+		DZA65_RS14265	0.24	-1.1
3,116,275	+		DZA65_RS14265	0.24	-1.4
3,116,276	-		DZA65_RS14265	0.24	+0.9
3,116,343	+		DZA65_RS14265	0.33	-0.8
3,116,344	-		DZA65_RS14265	0.33	-0.3
3,116,349	+		DZA65_RS14265	0.34	-0.5
3,116,349	+		DZA65_RS14265	0.34	-0.8
3,116,349	+		DZA65_RS14265	0.34	+1.5
3,116,353	+		DZA65_RS14265	0.34	-0.3
3,116,353	+		DZA65_RS14265	0.34	-1.6
3,116,454	+				-0.6
3,116,454	+		DZA65_RS14265	0.48	-0.8
3,116,455	-		DZA65_RS14265	0.48	-0.2
3,116,473	+		DZA65_RS14265	0.50	+0.6
3,116,474	-		DZA65_RS14265	0.51	+0.2
3,116,474	-		DZA65_RS14265	0.51	+0.3
3,116,474	-		DZA65_RS14265	0.51	+0.0
3,116,474	-		DZA65_RS14265	0.51	+0.3
3,116,474	-		DZA65_RS14265	0.51	-0.4
3,116,474	-		DZA65_RS14265	0.51	-1.6
3,116,474	-		DZA65_RS14265	0.51	+0.0
3,116,476	-		DZA65_RS14265	0.51	-0.7
3,116,494	+		DZA65_RS14265	0.53	-1.7
3,116,495	-		DZA65_RS14265	0.53	-0.8
3,116,526	+		DZA65_RS14265	0.57	-0.5
3,116,526	+		DZA65_RS14265	0.57	-0.5
3,116,527	-		DZA65_RS14265	0.58	-0.3
3,116,527	-		DZA65_RS14265	0.58	-0.1
3,116,527	-		DZA65_RS14265	0.58	-1.0
3,116,532	-		DZA65_RS14265	0.58	-1.8
3,116,532	-		DZA65_RS14265	0.58	-1.3
3,116,583	+		DZA65_RS14265	0.65	+0.2
3,116,583	+		DZA65_RS14265	0.65	-1.3
3,116,583	+		DZA65_RS14265	0.65	-0.8
3,116,583	+		DZA65_RS14265	0.65	+1.0
3,116,583	+		DZA65_RS14265	0.65	-0.6
3,116,583	+		DZA65_RS14265	0.65	+0.2
3,116,583	+		DZA65_RS14265	0.65	-0.5
3,116,583	+		DZA65_RS14265	0.65	-1.0
3,116,583	+		DZA65_RS14265	0.65	-0.9
3,116,584	-		DZA65_RS14265	0.65	-1.0
3,116,584	-		DZA65_RS14265	0.65	+0.7
3,116,588	-		DZA65_RS14265	0.66	-1.8
3,116,633	-		DZA65_RS14265	0.72	-1.3
3,116,710	-		DZA65_RS14265	0.82	-0.5
3,116,710	-		DZA65_RS14265	0.82	+0.1
3,116,710	-		DZA65_RS14265	0.82	-1.4
3,116,758	+		DZA65_RS14265	0.88	-0.8
3,116,758	+		DZA65_RS14265	0.88	-0.1
3,116,759	-		DZA65_RS14265	0.89	-0.5
3,116,775	+				-0.8
3,116,776	-				-0.1
3,116,776	-				+0.2
3,116,776	-				-0.2
3,116,776	-				-0.3
3,116,832	-				+0.3
3,116,832	-				+0.3
3,116,842	+				-0.1
3,116,843	-				+0.5
3,116,847	-				+0.9
3,116,897	+				-1.3
3,116,897	+				-0.0
3,116,898	-				+0.3
3,116,901	+				+0.2
3,116,901	+				-0.4
3,116,902	-				-0.6
3,116,921	+				-0.7
3,116,922	-				-0.5
3,116,940	-				+1.1
3,116,940	-				-0.1
3,116,945	-				-0.3
3,116,945	-				-0.8
3,116,959	-				-0.3
3,116,961	+				-0.4
3,116,962	-				+0.4
3,116,962	-				+0.1
3,116,983	-				-1.3
3,116,994	+				-1.4
3,116,994	+				+0.7
3,117,027	-				-0.4
3,117,093	-				-0.6
3,117,140	+				-0.7
3,117,205	+		DZA65_RS14270	0.15	-0.0
3,117,205	+		DZA65_RS14270	0.15	+0.2
3,117,255	-		DZA65_RS14270	0.23	-1.1
3,117,264	+		DZA65_RS14270	0.24	+0.3
3,117,312	+		DZA65_RS14270	0.32	-2.3
3,117,313	-		DZA65_RS14270	0.33	-1.7
3,117,313	-		DZA65_RS14270	0.33	-0.6
3,117,314	+		DZA65_RS14270	0.33	-0.3
3,117,327	-		DZA65_RS14270	0.35	-1.4
3,117,329	-		DZA65_RS14270	0.35	-0.7
3,117,385	+		DZA65_RS14270	0.44	-0.8
3,117,476	+		DZA65_RS14270	0.59	-0.6
3,117,533	+		DZA65_RS14270	0.69	+0.3
3,117,569	-		DZA65_RS14270	0.75	-0.1
3,117,569	-		DZA65_RS14270	0.75	+0.9
3,117,569	-		DZA65_RS14270	0.75	-1.4
3,117,648	+		DZA65_RS14270	0.88	-0.8
3,117,649	-		DZA65_RS14270	0.88	+0.3
3,117,686	+				+0.3