Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS13465

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
2,888,111	+		DZA65_RS13455	0.71	+0.2
2,888,111	+		DZA65_RS13455	0.71	+0.7
2,888,111	+		DZA65_RS13455	0.71	-0.6
2,888,111	+		DZA65_RS13455	0.71	-0.1
2,888,111	+		DZA65_RS13455	0.71	-0.3
2,888,111	+		DZA65_RS13455	0.71	-0.2
2,888,111	+		DZA65_RS13455	0.71	-1.3
2,888,111	+		DZA65_RS13455	0.71	-0.5
2,888,112	-		DZA65_RS13455	0.71	-0.0
2,888,112	-		DZA65_RS13455	0.71	-0.5
2,888,172	-		DZA65_RS13455	0.80	-0.6
2,888,273	-				+0.7
2,888,273	-				+0.3
2,888,281	+				-1.3
2,888,281	+				-0.9
2,888,281	+				+2.3
2,888,281	+				-1.3
2,888,282	-				+0.5
2,888,289	+				+0.4
2,888,289	+				-0.5
2,888,349	+				-0.2
2,888,349	+				+0.5
2,888,349	+				-1.1
2,888,350	-				-0.5
2,888,411	-				+0.7
2,888,414	-		DZA65_RS13460	0.10	-1.3
2,888,414	-		DZA65_RS13460	0.10	+0.8
2,888,414	-		DZA65_RS13460	0.10	-0.3
2,888,456	+		DZA65_RS13460	0.18	+0.7
2,888,459	+		DZA65_RS13460	0.18	-0.5
2,888,512	+		DZA65_RS13460	0.28	-2.5
2,888,512	+		DZA65_RS13460	0.28	+0.1
2,888,512	+		DZA65_RS13460	0.28	+0.8
2,888,513	-		DZA65_RS13460	0.28	+0.4
2,888,513	-		DZA65_RS13460	0.28	+0.1
2,888,534	+		DZA65_RS13460	0.32	-0.3
2,888,535	-		DZA65_RS13460	0.32	+1.1
2,888,561	+		DZA65_RS13460	0.37	-1.7
2,888,561	+		DZA65_RS13460	0.37	+0.8
2,888,561	+		DZA65_RS13460	0.37	+0.4
2,888,562	-		DZA65_RS13460	0.37	-0.9
2,888,562	-		DZA65_RS13460	0.37	+0.1
2,888,562	-		DZA65_RS13460	0.37	+0.0
2,888,562	-		DZA65_RS13460	0.37	+0.0
2,888,566	+		DZA65_RS13460	0.38	-0.3
2,888,566	+		DZA65_RS13460	0.38	-0.3
2,888,566	+		DZA65_RS13460	0.38	-0.6
2,888,567	-		DZA65_RS13460	0.38	-0.5
2,888,603	+		DZA65_RS13460	0.45	+0.3
2,888,603	+		DZA65_RS13460	0.45	+1.1
2,888,604	-		DZA65_RS13460	0.45	-0.6
2,888,604	-		DZA65_RS13460	0.45	-0.1
2,888,604	-		DZA65_RS13460	0.45	+0.2
2,888,631	+		DZA65_RS13460	0.50	-0.9
2,888,631	+		DZA65_RS13460	0.50	-0.1
2,888,631	+		DZA65_RS13460	0.50	-1.7
2,888,632	-		DZA65_RS13460	0.50	-0.7
2,888,632	-		DZA65_RS13460	0.50	+1.3
2,888,632	-		DZA65_RS13460	0.50	+1.7
2,888,632	-		DZA65_RS13460	0.50	-1.9
2,888,663	+		DZA65_RS13460	0.56	+1.0
2,888,664	-		DZA65_RS13460	0.56	-0.1
2,888,681	-		DZA65_RS13460	0.59	+1.3
2,888,709	+		DZA65_RS13460	0.64	-0.4
2,888,710	-		DZA65_RS13460	0.64	-0.5
2,888,723	+		DZA65_RS13460	0.66	-0.2
2,888,723	+		DZA65_RS13460	0.66	-0.5
2,888,723	+		DZA65_RS13460	0.66	-0.5
2,888,723	+		DZA65_RS13460	0.66	-0.1
2,888,723	+		DZA65_RS13460	0.66	-1.0
2,888,723	+		DZA65_RS13460	0.66	-1.3
2,888,723	+		DZA65_RS13460	0.66	+1.1
2,888,724	-		DZA65_RS13460	0.67	-0.5
2,888,724	-		DZA65_RS13460	0.67	+0.8
2,888,724	-		DZA65_RS13460	0.67	+1.4
2,888,724	-		DZA65_RS13460	0.67	-1.1
2,888,724	-		DZA65_RS13460	0.67	-0.4
2,888,724	-		DZA65_RS13460	0.67	+0.3
2,888,724	-		DZA65_RS13460	0.67	-0.5
2,888,725	+		DZA65_RS13460	0.67	-0.3
2,888,725	+		DZA65_RS13460	0.67	-0.1
2,888,725	+		DZA65_RS13460	0.67	+0.4
2,888,725	+		DZA65_RS13460	0.67	+0.1
2,888,726	-		DZA65_RS13460	0.67	-1.0
2,888,726	-		DZA65_RS13460	0.67	-0.5
2,888,774	+		DZA65_RS13460	0.76	-0.6
2,888,774	+		DZA65_RS13460	0.76	+0.3
2,888,787	-		DZA65_RS13460	0.78	-1.1
2,888,787	-		DZA65_RS13460	0.78	-0.5
2,888,891	+				+0.7
2,888,907	-				+0.3
2,888,964	-				-0.2
2,888,967	+				-0.2
2,888,967	+				-0.5
2,888,967	+				+0.3
2,888,967	+				-0.3
2,888,968	-				+0.7
2,888,968	-				-0.2
2,888,968	-				-0.9
2,888,968	-				+1.0
2,888,989	-				-2.8
2,888,989	-				+2.1
2,889,020	+				-0.3
2,889,103	+				-3.8
2,889,104	-				-0.6
2,889,107	+				+0.7
2,889,107	+				+0.9
2,889,107	+				+1.7
2,889,107	+				-0.5
2,889,107	+				-0.3
2,889,107	+				-1.9
2,889,107	+				-0.3
2,889,107	+				+0.7
2,889,107	+				-1.1
2,889,107	+				-1.0
2,889,107	+				+0.7
2,889,107	+				-2.1
2,889,107	+				-1.0
2,889,107	+				-0.5
2,889,108	-				-0.2
2,889,108	-				-0.3
2,889,108	-				+0.7
2,889,108	-				-1.1
2,889,108	-				-1.1
2,889,108	-				+0.0
2,889,108	-				-0.9
2,889,108	-				-0.0
2,889,113	-				+0.1
2,889,113	-				-1.6
2,889,115	+				-0.3
2,889,116	-				-0.1
2,889,116	-				+1.6
2,889,116	-				-1.3
2,889,118	+				+0.1
2,889,118	+				-0.5
2,889,118	+				-1.4
2,889,119	-				-0.9
2,889,119	-				+0.4
2,889,119	-				-1.6
2,889,129	+				-1.6
2,889,174	-				-1.2
2,889,174	-				-1.1
2,889,177	+				-1.3
2,889,178	-				+0.2
2,889,178	-				-1.9
2,889,178	-				+0.0
2,889,178	-				-0.1
2,889,178	-				-0.9
2,889,198	+				+0.7
2,889,199	-				-2.5
2,889,199	-				-1.6
2,889,227	+				-1.2
2,889,227	+				-2.5
2,889,227	+				-0.7
2,889,228	-				-0.7
2,889,228	-				-0.3
2,889,228	-				-0.1
2,889,231	-				-2.6
2,889,266	+				-1.5
2,889,266	+				+1.1
2,889,266	+				-1.6
2,889,266	+				-0.3
2,889,266	+				-0.1
2,889,266	+				+0.3
2,889,267	-				-0.9
2,889,267	-				-1.3
2,889,267	-				+0.1
2,889,267	-				-1.6
2,889,267	-				-0.1
2,889,267	-				+0.0
2,889,267	-				-1.3
2,889,267	-				-0.7
2,889,267	-				-1.1
2,889,267	-				-0.1
2,889,301	-		DZA65_RS13465	0.12	-0.2
2,889,434	+		DZA65_RS13465	0.19	-0.8
2,889,434	+		DZA65_RS13465	0.19	-2.3
2,889,434	+		DZA65_RS13465	0.19	-2.1
2,889,435	-		DZA65_RS13465	0.19	-1.0
2,889,435	-		DZA65_RS13465	0.19	-2.9
2,889,454	+		DZA65_RS13465	0.21	+0.1
2,889,454	+		DZA65_RS13465	0.21	-0.8
2,889,455	-		DZA65_RS13465	0.21	-1.9
2,889,456	+		DZA65_RS13465	0.21	-1.4
2,889,457	-		DZA65_RS13465	0.21	-2.8
2,889,457	-		DZA65_RS13465	0.21	-1.3
2,889,457	-		DZA65_RS13465	0.21	-2.5
2,889,459	+		DZA65_RS13465	0.21	-1.1
2,889,459	+		DZA65_RS13465	0.21	-0.8
2,889,459	+		DZA65_RS13465	0.21	+0.7
2,889,459	+		DZA65_RS13465	0.21	-1.1
2,889,467	+				-0.6
2,889,467	+		DZA65_RS13465	0.21	-0.5
2,889,467	+		DZA65_RS13465	0.21	-1.3
2,889,467	+		DZA65_RS13465	0.21	-0.3
2,889,468	-		DZA65_RS13465	0.21	-2.5
2,889,595	+		DZA65_RS13465	0.29	-1.9
2,889,595	+		DZA65_RS13465	0.29	-0.3
2,889,595	+		DZA65_RS13465	0.29	+0.1
2,889,603	-		DZA65_RS13465	0.29	-1.0
2,889,620	+		DZA65_RS13465	0.30	-0.6
2,889,621	-		DZA65_RS13465	0.30	-2.1
2,889,621	-		DZA65_RS13465	0.30	+0.3
2,889,621	-		DZA65_RS13465	0.30	-1.6
2,889,642	+				+0.7
2,889,642	+		DZA65_RS13465	0.32	-0.3
2,889,642	+		DZA65_RS13465	0.32	-1.5
2,889,643	-		DZA65_RS13465	0.32	-2.5
2,889,643	-		DZA65_RS13465	0.32	-1.8
2,889,646	+		DZA65_RS13465	0.32	-0.2
2,889,646	+		DZA65_RS13465	0.32	-1.2
2,889,646	+		DZA65_RS13465	0.32	-0.5
2,889,646	+		DZA65_RS13465	0.32	-0.7
2,889,646	+		DZA65_RS13465	0.32	-1.3
2,889,646	+		DZA65_RS13465	0.32	-0.7
2,889,646	+		DZA65_RS13465	0.32	-0.0
2,889,647	-		DZA65_RS13465	0.32	-1.5
2,889,647	-		DZA65_RS13465	0.32	-1.6
2,889,647	-		DZA65_RS13465	0.32	+0.5
2,889,647	-		DZA65_RS13465	0.32	+0.1
2,889,647	-		DZA65_RS13465	0.32	-1.9
2,889,647	-		DZA65_RS13465	0.32	-2.1
2,889,647	-		DZA65_RS13465	0.32	-1.5
2,889,647	-		DZA65_RS13465	0.32	+0.5
2,889,647	-		DZA65_RS13465	0.32	-1.6
2,889,647	-		DZA65_RS13465	0.32	-1.0
2,889,741	+		DZA65_RS13465	0.38	-0.3
2,889,742	-		DZA65_RS13465	0.38	-0.1
2,889,791	+		DZA65_RS13465	0.41	-1.2
2,889,794	+		DZA65_RS13465	0.41	-1.3
2,889,794	+		DZA65_RS13465	0.41	-0.5
2,889,795	-		DZA65_RS13465	0.41	-2.6
2,889,795	-		DZA65_RS13465	0.41	+0.7
2,889,795	-		DZA65_RS13465	0.41	-3.4
2,889,806	+		DZA65_RS13465	0.41	-1.5
2,889,806	+		DZA65_RS13465	0.41	-0.6
2,889,806	+		DZA65_RS13465	0.41	-0.3
2,889,806	+		DZA65_RS13465	0.41	-0.5
2,889,806	+		DZA65_RS13465	0.41	-1.6
2,889,806	+		DZA65_RS13465	0.41	+0.3
2,889,806	+		DZA65_RS13465	0.41	-0.1
2,889,807	-		DZA65_RS13465	0.42	+0.7
2,889,807	-		DZA65_RS13465	0.42	-0.9
2,889,807	-		DZA65_RS13465	0.42	-2.2
2,889,807	-		DZA65_RS13465	0.42	-0.3
2,889,807	-		DZA65_RS13465	0.42	-2.1
2,889,807	-		DZA65_RS13465	0.42	-1.3
2,889,807	-		DZA65_RS13465	0.42	-0.5
2,889,807	-		DZA65_RS13465	0.42	+0.1
2,889,807	-		DZA65_RS13465	0.42	-2.9
2,889,817	-		DZA65_RS13465	0.42	-0.5
2,890,007	+		DZA65_RS13465	0.53	-1.6
2,890,008	-		DZA65_RS13465	0.53	+0.4
2,890,008	-		DZA65_RS13465	0.53	-1.1
2,890,045	-				+1.7
2,890,105	+		DZA65_RS13465	0.59	+1.0
2,890,105	+		DZA65_RS13465	0.59	-2.5
2,890,106	-		DZA65_RS13465	0.59	-1.5
2,890,106	-		DZA65_RS13465	0.59	-1.3
2,890,326	+		DZA65_RS13465	0.72	-0.8
2,890,326	+		DZA65_RS13465	0.72	-2.8
2,890,327	-		DZA65_RS13465	0.72	-1.9
2,890,327	-		DZA65_RS13465	0.72	+0.0
2,890,327	-		DZA65_RS13465	0.72	-1.3
2,890,327	-		DZA65_RS13465	0.72	-0.9
2,890,328	+		DZA65_RS13465	0.72	-2.6
2,890,328	+		DZA65_RS13465	0.72	-0.5
2,890,328	+		DZA65_RS13465	0.72	-1.1
2,890,328	+		DZA65_RS13465	0.72	-1.9
2,890,328	+		DZA65_RS13465	0.72	-0.3
2,890,328	+		DZA65_RS13465	0.72	-1.5
2,890,329	-		DZA65_RS13465	0.72	-2.3
2,890,329	-		DZA65_RS13465	0.72	-2.3
2,890,344	-		DZA65_RS13465	0.73	+0.9
2,890,344	-		DZA65_RS13465	0.73	-0.9
2,890,344	-		DZA65_RS13465	0.73	-1.9
2,890,391	+		DZA65_RS13465	0.76	-2.9
2,890,391	+		DZA65_RS13465	0.76	+1.7
2,890,391	+		DZA65_RS13465	0.76	-2.7
2,890,392	-		DZA65_RS13465	0.76	-0.2
2,890,392	-		DZA65_RS13465	0.76	-1.3
2,890,439	-		DZA65_RS13465	0.79	-0.6
2,890,461	+		DZA65_RS13465	0.80	+0.3
2,890,596	+		DZA65_RS13465	0.88	-0.9
2,890,601	+		DZA65_RS13465	0.89	-0.9
2,890,601	+		DZA65_RS13465	0.89	-1.0
2,890,601	+		DZA65_RS13465	0.89	-2.1
2,890,601	+		DZA65_RS13465	0.89	-1.2
2,890,601	+		DZA65_RS13465	0.89	-2.0
2,890,602	-		DZA65_RS13465	0.89	-0.7
2,890,602	-		DZA65_RS13465	0.89	-0.3
2,890,602	-		DZA65_RS13465	0.89	+0.1
2,890,773	+				-0.3
2,890,786	+				-3.7
2,890,809	+				-0.7
2,890,809	+				-0.5
2,890,809	+				-1.1
2,890,809	+				-0.8
2,890,809	+				-1.8
2,890,810	-				+1.9
2,890,810	-				+1.0
2,890,814	-				+0.7
2,890,830	+				+0.7
2,890,874	+				-1.3
2,890,874	+				+0.4
2,890,875	-				-0.0
2,890,890	+				-0.5
2,890,890	+				-0.4
2,890,890	+				-0.1
2,890,892	+				-3.3
2,890,892	+				+0.3
2,890,893	-				-0.7
2,890,893	-				+1.3
2,890,927	+				-1.0
2,890,927	+				-0.6
2,890,928	-				+0.5
2,890,928	-				+0.6
2,890,928	-				+0.8
2,890,928	-				+1.5
2,890,928	-				+1.6
2,890,928	-				-0.1
2,890,928	-				+1.5
2,890,928	-				+1.3
2,890,979	+				-0.2
2,890,979	+				-1.3
2,890,980	-				+1.9
2,890,980	-				+1.8
2,890,984	+				-0.1
2,890,984	+				-0.9
2,890,984	+				-0.6
2,890,985	-				+0.7
2,890,985	-				+1.1
2,891,015	-				+1.1
2,891,015	-				+1.0
2,891,034	+				-1.3
2,891,049	+				+0.7
2,891,049	+				-0.2
2,891,049	+				-0.6
2,891,049	+				-0.6
2,891,050	-				+1.0
2,891,050	-				+0.7
2,891,050	-				+0.9
2,891,050	-				-0.9
2,891,050	-				-0.1
2,891,050	-				+0.8
2,891,050	-				+0.7
2,891,050	-				-0.6
2,891,050	-				+1.5
2,891,059	+				-0.6
2,891,059	+				+1.3
2,891,060	-				+0.4
2,891,064	+				-0.7
2,891,065	-				+0.7
2,891,186	+				-1.0
2,891,186	+				-0.9
2,891,187	-				+0.2
2,891,197	+				-0.3
2,891,197	+				+0.8
2,891,197	+				-0.2
2,891,197	+				-2.5
2,891,270	+		DZA65_RS13470	0.11	-1.3
2,891,271	-		DZA65_RS13470	0.12	+0.4
2,891,271	-		DZA65_RS13470	0.12	+1.0
2,891,274	+		DZA65_RS13470	0.12	-1.9
2,891,274	+		DZA65_RS13470	0.12	+0.3
2,891,274	+		DZA65_RS13470	0.12	+0.3
2,891,274	+		DZA65_RS13470	0.12	-2.1
2,891,275	-		DZA65_RS13470	0.12	+2.1
2,891,275	-		DZA65_RS13470	0.12	+1.2
2,891,275	-		DZA65_RS13470	0.12	+2.3
2,891,285	+		DZA65_RS13470	0.12	-0.5
2,891,285	+		DZA65_RS13470	0.12	-2.3
2,891,285	+		DZA65_RS13470	0.12	-0.9
2,891,286	-				+0.7
2,891,286	-		DZA65_RS13470	0.13	-0.9
2,891,398	-		DZA65_RS13470	0.20	-0.2
2,891,410	+		DZA65_RS13470	0.21	+1.1
2,891,410	+		DZA65_RS13470	0.21	-1.1
2,891,411	-		DZA65_RS13470	0.21	+0.4
2,891,411	-		DZA65_RS13470	0.21	+0.0
2,891,466	+		DZA65_RS13470	0.25	-1.1
2,891,466	+		DZA65_RS13470	0.25	-2.1
2,891,466	+		DZA65_RS13470	0.25	-0.3
2,891,467	-		DZA65_RS13470	0.25	-1.1
2,891,467	-		DZA65_RS13470	0.25	+0.7
2,891,467	-		DZA65_RS13470	0.25	+0.8
2,891,467	-		DZA65_RS13470	0.25	+0.2
2,891,467	-		DZA65_RS13470	0.25	+1.8
2,891,467	-		DZA65_RS13470	0.25	+0.7
2,891,468	+		DZA65_RS13470	0.25	-1.5
2,891,469	-		DZA65_RS13470	0.25	-0.5
2,891,469	-		DZA65_RS13470	0.25	-0.4
2,891,469	-		DZA65_RS13470	0.25	+0.5
2,891,469	-		DZA65_RS13470	0.25	+1.1
2,891,469	-		DZA65_RS13470	0.25	+0.3
2,891,521	-		DZA65_RS13470	0.29	-0.2
2,891,705	+		DZA65_RS13470	0.41	-1.7
2,891,706	-		DZA65_RS13470	0.41	+0.4
2,891,706	-		DZA65_RS13470	0.41	+1.4
2,891,730	+		DZA65_RS13470	0.43	-1.6
2,891,730	+		DZA65_RS13470	0.43	+0.1
2,891,738	+		DZA65_RS13470	0.44	-0.7
2,891,738	+		DZA65_RS13470	0.44	-1.6
2,891,739	-		DZA65_RS13470	0.44	-2.5
2,891,739	-		DZA65_RS13470	0.44	+0.3
2,891,750	+		DZA65_RS13470	0.44	-0.3
2,891,751	-		DZA65_RS13470	0.45	-1.2
2,891,760	+		DZA65_RS13470	0.45	-0.1
2,891,761	-		DZA65_RS13470	0.45	+0.3