Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS12750

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
2,727,247	+		DZA65_RS12745	0.36	-0.4
2,727,274	+		DZA65_RS12745	0.39	+1.5
2,727,392	-		DZA65_RS12745	0.49	+1.1
2,727,399	-		DZA65_RS12745	0.50	-0.7
2,727,501	+		DZA65_RS12745	0.59	-0.2
2,727,501	+		DZA65_RS12745	0.59	+0.2
2,727,516	+		DZA65_RS12745	0.61	-0.7
2,727,698	+		DZA65_RS12745	0.77	-0.9
2,727,698	+		DZA65_RS12745	0.77	-1.2
2,727,698	+		DZA65_RS12745	0.77	-0.4
2,727,699	-		DZA65_RS12745	0.77	+0.6
2,727,890	+				-0.1
2,727,891	-				-1.4
2,727,926	-				+1.0
2,727,926	-				-0.1
2,727,947	-				-0.2
2,727,947	-				+0.3
2,728,055	+				+0.5
2,728,085	+				-0.5
2,728,085	+				-0.7
2,728,085	+				-0.8
2,728,085	+				-0.2
2,728,085	+				-0.7
2,728,086	-				-0.9
2,728,086	-				+1.4
2,728,301	+				-1.2
2,728,301	+				+0.1
2,728,302	-				+0.5
2,728,302	-				-2.5
2,728,302	-				+0.3
2,728,319	-				-1.4
2,728,319	-				-0.9
2,728,330	+				+0.5
2,728,331	-				-0.7
2,728,331	-				+0.1
2,728,331	-				-1.6
2,728,361	-				+1.0
2,728,418	+		DZA65_RS12750	0.11	-1.9
2,728,419	-		DZA65_RS12750	0.11	-0.9
2,728,419	-		DZA65_RS12750	0.11	-1.2
2,728,419	-		DZA65_RS12750	0.11	+0.2
2,728,419	-		DZA65_RS12750	0.11	-1.9
2,728,419	-		DZA65_RS12750	0.11	-0.4
2,728,534	+		DZA65_RS12750	0.18	-0.8
2,728,572	+		DZA65_RS12750	0.20	-0.7
2,728,619	+		DZA65_RS12750	0.23	-0.0
2,728,619	+		DZA65_RS12750	0.23	+0.6
2,728,619	+		DZA65_RS12750	0.23	-0.3
2,728,619	+		DZA65_RS12750	0.23	+0.6
2,728,619	+		DZA65_RS12750	0.23	-0.6
2,728,619	+		DZA65_RS12750	0.23	-1.4
2,728,619	+		DZA65_RS12750	0.23	-1.9
2,728,619	+		DZA65_RS12750	0.23	-0.4
2,728,619	+		DZA65_RS12750	0.23	-0.0
2,728,619	+		DZA65_RS12750	0.23	+0.1
2,728,619	+		DZA65_RS12750	0.23	+0.1
2,728,619	+		DZA65_RS12750	0.23	-0.8
2,728,620	-		DZA65_RS12750	0.23	-0.9
2,728,620	-		DZA65_RS12750	0.23	-1.5
2,728,620	-		DZA65_RS12750	0.23	-0.5
2,728,620	-		DZA65_RS12750	0.23	+0.3
2,728,620	-		DZA65_RS12750	0.23	+0.5
2,728,620	-		DZA65_RS12750	0.23	-0.1
2,728,620	-		DZA65_RS12750	0.23	-0.7
2,728,620	-		DZA65_RS12750	0.23	+0.2
2,728,620	-		DZA65_RS12750	0.23	-0.9
2,728,620	-		DZA65_RS12750	0.23	-0.4
2,728,620	-		DZA65_RS12750	0.23	+0.1
2,728,620	-		DZA65_RS12750	0.23	+2.6
2,728,649	-		DZA65_RS12750	0.24	+0.3
2,728,686	+		DZA65_RS12750	0.26	-0.4
2,728,686	+		DZA65_RS12750	0.26	+1.9
2,728,686	+		DZA65_RS12750	0.26	-0.5
2,728,730	+		DZA65_RS12750	0.29	+1.4
2,728,730	+		DZA65_RS12750	0.29	-1.5
2,728,730	+		DZA65_RS12750	0.29	+0.5
2,728,730	+		DZA65_RS12750	0.29	-0.5
2,728,730	+		DZA65_RS12750	0.29	-0.5
2,728,730	+		DZA65_RS12750	0.29	+0.1
2,728,730	+		DZA65_RS12750	0.29	+0.1
2,728,730	+		DZA65_RS12750	0.29	-1.4
2,728,731	-		DZA65_RS12750	0.29	+1.5
2,728,731	-		DZA65_RS12750	0.29	+0.6
2,728,731	-		DZA65_RS12750	0.29	+0.3
2,728,731	-		DZA65_RS12750	0.29	+0.5
2,728,731	-		DZA65_RS12750	0.29	-1.7
2,728,731	-		DZA65_RS12750	0.29	-0.4
2,728,731	-		DZA65_RS12750	0.29	-0.7
2,728,731	-		DZA65_RS12750	0.29	-0.4
2,728,731	-		DZA65_RS12750	0.29	-0.4
2,728,731	-		DZA65_RS12750	0.29	+0.6
2,728,731	-		DZA65_RS12750	0.29	-0.4
2,728,731	-		DZA65_RS12750	0.29	-0.7
2,728,731	-		DZA65_RS12750	0.29	-1.7
2,728,731	-		DZA65_RS12750	0.29	-0.5
2,728,731	-		DZA65_RS12750	0.29	+0.1
2,728,731	-		DZA65_RS12750	0.29	-0.5
2,728,731	-		DZA65_RS12750	0.29	+0.1
2,728,731	-		DZA65_RS12750	0.29	-1.4
2,728,756	-		DZA65_RS12750	0.31	+1.6
2,728,821	+		DZA65_RS12750	0.34	-0.9
2,728,821	+		DZA65_RS12750	0.34	+0.5
2,728,822	-		DZA65_RS12750	0.34	-0.1
2,728,946	+		DZA65_RS12750	0.42	-2.2
2,728,946	+		DZA65_RS12750	0.42	+1.2
2,728,947	-		DZA65_RS12750	0.42	+0.6
2,729,073	+		DZA65_RS12750	0.49	-2.4
2,729,073	+		DZA65_RS12750	0.49	+0.3
2,729,268	+		DZA65_RS12750	0.60	-0.2
2,729,269	-		DZA65_RS12750	0.60	+0.6
2,729,269	-		DZA65_RS12750	0.60	+0.9
2,729,357	+		DZA65_RS12750	0.66	-0.8
2,729,358	-		DZA65_RS12750	0.66	-1.4
2,729,358	-		DZA65_RS12750	0.66	-0.6
2,729,358	-		DZA65_RS12750	0.66	+0.1
2,729,358	-		DZA65_RS12750	0.66	+0.5
2,729,358	-		DZA65_RS12750	0.66	+1.2
2,729,422	+		DZA65_RS12750	0.69	-1.8
2,729,422	+		DZA65_RS12750	0.69	-0.9
2,729,422	+		DZA65_RS12750	0.69	-0.2
2,729,422	+		DZA65_RS12750	0.69	-0.6
2,729,422	+		DZA65_RS12750	0.69	+0.0
2,729,422	+		DZA65_RS12750	0.69	+0.9
2,729,422	+		DZA65_RS12750	0.69	-0.5
2,729,422	+		DZA65_RS12750	0.69	+0.4
2,729,422	+		DZA65_RS12750	0.69	-0.6
2,729,422	+		DZA65_RS12750	0.69	-1.8
2,729,423	-		DZA65_RS12750	0.69	+1.0
2,729,423	-		DZA65_RS12750	0.69	+1.3
2,729,423	-		DZA65_RS12750	0.69	-0.5
2,729,423	-		DZA65_RS12750	0.69	-1.7
2,729,423	-		DZA65_RS12750	0.69	-0.2
2,729,423	-		DZA65_RS12750	0.69	-1.5
2,729,423	-		DZA65_RS12750	0.69	+0.6
2,729,423	-		DZA65_RS12750	0.69	+0.6
2,729,461	+		DZA65_RS12750	0.72	+1.3
2,729,461	+		DZA65_RS12750	0.72	-0.2
2,729,461	+		DZA65_RS12750	0.72	-0.9
2,729,461	+		DZA65_RS12750	0.72	+0.2
2,729,461	+		DZA65_RS12750	0.72	+0.3
2,729,462	-		DZA65_RS12750	0.72	-0.0
2,729,462	-		DZA65_RS12750	0.72	-1.4
2,729,462	-		DZA65_RS12750	0.72	+0.1
2,729,506	+		DZA65_RS12750	0.74	-0.7
2,729,521	+		DZA65_RS12750	0.75	-0.0
2,729,560	+				-1.7
2,729,710	+		DZA65_RS12750	0.86	+2.1
2,729,711	-		DZA65_RS12750	0.86	+0.6
2,729,997	-				-2.2
2,730,179	-		DZA65_RS12755	0.40	+0.8
2,730,179	-		DZA65_RS12755	0.40	+0.6
2,730,179	-		DZA65_RS12755	0.40	-0.7
2,730,250	+		DZA65_RS12755	0.57	-0.7
2,730,366	+		DZA65_RS12755	0.84	-1.7
2,730,373	+		DZA65_RS12755	0.85	-0.7
2,730,374	-		DZA65_RS12755	0.85	+0.1
2,730,375	+		DZA65_RS12755	0.86	+1.2
2,730,375	+		DZA65_RS12755	0.86	-0.4
2,730,493	+				-1.1
2,730,493	+				-0.0
2,730,493	+				-1.7
2,730,493	+				-0.4
2,730,494	-				-0.9
2,730,500	+				+1.2
2,730,500	+				-1.4
2,730,501	-				-0.8
2,730,501	-				-0.9
2,730,501	-				-0.8
2,730,501	-				-0.8
2,730,513	+				-0.3
2,730,513	+				+0.2
2,730,513	+				-0.9
2,730,513	+				+0.2
2,730,518	+				-0.4
2,730,519	-				-0.8
2,730,519	-				+0.5
2,730,519	-				+0.3
2,730,519	-				-0.1
2,730,519	-				-0.1
2,730,520	+				-1.2
2,730,520	+				-0.4
2,730,520	+				+0.5
2,730,520	+				+0.9
2,730,520	+				-0.2
2,730,520	+				-1.5
2,730,520	+				+0.1
2,730,520	+				-1.7
2,730,521	-				-1.4
2,730,521	-				-0.0
2,730,521	-				-0.5
2,730,521	-				-0.9
2,730,521	-				+0.0
2,730,521	-				+0.2
2,730,521	-				+0.3
2,730,521	-				-3.4
2,730,521	-				-0.4
2,730,523	+				+0.1
2,730,523	+				-0.8
2,730,523	+				-0.4
2,730,523	+				-2.4
2,730,524	-				-0.8
2,730,524	-				+0.3
2,730,524	-				-0.3
2,730,524	-				+0.3
2,730,524	-				-0.2
2,730,524	-				+0.2
2,730,524	-				+0.3
2,730,524	-				-1.5
2,730,524	-				-0.2
2,730,524	-				-0.9
2,730,532	+				+0.4
2,730,532	+				+0.6
2,730,532	+				-0.1
2,730,539	-				+0.1
2,730,539	-				+0.1
2,730,539	-				-0.2
2,730,544	+				+0.5
2,730,544	+				+0.2
2,730,544	+				+0.6
2,730,544	+				+0.9
2,730,545	-				-1.4
2,730,545	-				+0.1
2,730,545	-				-0.4
2,730,545	-				-0.4
2,730,545	-				+0.5
2,730,545	-				-1.2
2,730,545	-				-1.7
2,730,545	-				-0.7
2,730,545	-				-1.4
2,730,545	-				-0.4
2,730,545	-				-0.3
2,730,602	-				-0.4
2,730,646	+				+0.6
2,730,646	+				-1.3
2,730,649	+				-0.5
2,730,649	+				-0.4
2,730,649	+				+0.1
2,730,650	-				-1.0
2,730,681	+				-0.2
2,730,734	-				+0.4
2,730,750	+				-0.4
2,730,750	+				-0.9
2,730,751	-		DZA65_RS12760	0.10	-0.5
2,730,751	-		DZA65_RS12760	0.10	-0.7
2,730,751	-		DZA65_RS12760	0.10	-2.3
2,730,854	+		DZA65_RS12760	0.24	+1.1
2,730,875	+		DZA65_RS12760	0.27	-0.2
2,730,876	-		DZA65_RS12760	0.27	-1.4
2,730,876	-		DZA65_RS12760	0.27	-0.5
2,730,876	-		DZA65_RS12760	0.27	-0.9
2,730,876	-		DZA65_RS12760	0.27	+0.6
2,730,876	-		DZA65_RS12760	0.27	-0.5
2,730,902	+				+0.2
2,730,903	-		DZA65_RS12760	0.31	-0.1
2,730,941	+		DZA65_RS12760	0.36	-0.3