Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS11170

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
2,366,807	+		DZA65_RS11165	0.21	-0.5
2,366,807	+		DZA65_RS11165	0.21	+0.2
2,366,807	+		DZA65_RS11165	0.21	+0.5
2,366,807	+		DZA65_RS11165	0.21	+0.9
2,366,808	-		DZA65_RS11165	0.21	-0.2
2,366,808	-		DZA65_RS11165	0.21	+0.2
2,366,808	-		DZA65_RS11165	0.21	-0.9
2,366,808	-		DZA65_RS11165	0.21	+0.5
2,366,839	-		DZA65_RS11165	0.24	-1.1
2,366,874	-		DZA65_RS11165	0.27	+0.9
2,366,949	+		DZA65_RS11165	0.33	-1.5
2,366,949	+		DZA65_RS11165	0.33	+0.5
2,366,949	+		DZA65_RS11165	0.33	-1.0
2,366,950	-		DZA65_RS11165	0.33	-1.1
2,366,950	-		DZA65_RS11165	0.33	-2.9
2,366,957	+		DZA65_RS11165	0.34	+0.1
2,366,957	+		DZA65_RS11165	0.34	-1.1
2,366,958	-		DZA65_RS11165	0.34	+1.8
2,366,958	-		DZA65_RS11165	0.34	+0.2
2,366,985	+		DZA65_RS11165	0.36	+0.2
2,366,985	+		DZA65_RS11165	0.36	+1.3
2,367,070	+		DZA65_RS11165	0.43	+0.5
2,367,070	+		DZA65_RS11165	0.43	+1.5
2,367,071	-		DZA65_RS11165	0.43	+0.3
2,367,071	-		DZA65_RS11165	0.43	+0.5
2,367,071	-		DZA65_RS11165	0.43	-1.1
2,367,071	-		DZA65_RS11165	0.43	-0.2
2,367,071	-		DZA65_RS11165	0.43	-1.8
2,367,123	+		DZA65_RS11165	0.47	+0.5
2,367,123	+		DZA65_RS11165	0.47	-1.5
2,367,123	+		DZA65_RS11165	0.47	+2.8
2,367,123	+		DZA65_RS11165	0.47	+0.2
2,367,123	+		DZA65_RS11165	0.47	-0.6
2,367,124	-		DZA65_RS11165	0.47	-1.9
2,367,125	+		DZA65_RS11165	0.47	-2.6
2,367,125	+		DZA65_RS11165	0.47	-0.5
2,367,125	+		DZA65_RS11165	0.47	+0.2
2,367,125	+		DZA65_RS11165	0.47	-1.6
2,367,125	+		DZA65_RS11165	0.47	+0.4
2,367,125	+		DZA65_RS11165	0.47	-0.8
2,367,125	+		DZA65_RS11165	0.47	-0.5
2,367,126	-		DZA65_RS11165	0.47	-1.5
2,367,126	-		DZA65_RS11165	0.47	-0.2
2,367,126	-		DZA65_RS11165	0.47	-0.1
2,367,134	+		DZA65_RS11165	0.48	-0.9
2,367,135	-		DZA65_RS11165	0.48	+0.1
2,367,135	-		DZA65_RS11165	0.48	-0.1
2,367,135	-		DZA65_RS11165	0.48	-1.5
2,367,233	+		DZA65_RS11165	0.56	+0.2
2,367,234	-		DZA65_RS11165	0.56	-0.1
2,367,236	+		DZA65_RS11165	0.56	+0.3
2,367,312	-		DZA65_RS11165	0.63	+0.4
2,367,334	+		DZA65_RS11165	0.64	-0.2
2,367,334	+		DZA65_RS11165	0.64	+0.3
2,367,334	+		DZA65_RS11165	0.64	-1.1
2,367,334	+		DZA65_RS11165	0.64	-0.3
2,367,335	-		DZA65_RS11165	0.64	-0.5
2,367,335	-		DZA65_RS11165	0.64	+0.0
2,367,335	-		DZA65_RS11165	0.64	-0.6
2,367,343	-		DZA65_RS11165	0.65	+1.4
2,367,369	+		DZA65_RS11165	0.67	-0.2
2,367,370	-		DZA65_RS11165	0.67	-0.1
2,367,578	+		DZA65_RS11165	0.84	-0.5
2,367,578	+		DZA65_RS11165	0.84	-0.5
2,367,578	+		DZA65_RS11165	0.84	-0.3
2,367,578	+		DZA65_RS11165	0.84	+0.5
2,367,579	-		DZA65_RS11165	0.84	+0.1
2,367,597	+		DZA65_RS11165	0.86	+1.5
2,367,597	+		DZA65_RS11165	0.86	-0.1
2,367,597	+		DZA65_RS11165	0.86	+1.0
2,367,598	-		DZA65_RS11165	0.86	-0.1
2,367,689	-				-1.8
2,367,689	-				-0.4
2,367,741	+				-1.9
2,367,747	+				-1.7
2,367,747	+				-0.1
2,367,747	+				-0.9
2,367,747	+				+0.7
2,367,747	+				-1.2
2,367,748	-				+0.3
2,367,827	+				-0.7
2,367,828	-				-1.5
2,367,828	-				-1.2
2,367,944	+		DZA65_RS11170	0.19	+0.1
2,367,944	+		DZA65_RS11170	0.19	-0.9
2,367,944	+		DZA65_RS11170	0.19	-0.2
2,367,944	+		DZA65_RS11170	0.19	-0.6
2,367,944	+		DZA65_RS11170	0.19	+0.1
2,367,945	-		DZA65_RS11170	0.19	+0.5
2,367,945	-		DZA65_RS11170	0.19	-1.8
2,367,969	+		DZA65_RS11170	0.22	+0.6
2,367,969	+		DZA65_RS11170	0.22	-1.3
2,368,312	+		DZA65_RS11170	0.63	+0.5
2,368,326	+		DZA65_RS11170	0.65	+0.6
2,368,326	+		DZA65_RS11170	0.65	-0.5
2,368,327	-		DZA65_RS11170	0.65	-0.4
2,368,327	-		DZA65_RS11170	0.65	-0.7
2,368,334	+		DZA65_RS11170	0.66	-1.7
2,368,334	+		DZA65_RS11170	0.66	+0.5
2,368,334	+		DZA65_RS11170	0.66	-1.2
2,368,335	-		DZA65_RS11170	0.66	-2.9
2,368,335	-		DZA65_RS11170	0.66	-1.1
2,368,335	-		DZA65_RS11170	0.66	-1.9
2,368,335	-		DZA65_RS11170	0.66	-1.5
2,368,338	+		DZA65_RS11170	0.66	+0.4
2,368,339	-				-1.8
2,368,392	+		DZA65_RS11170	0.73	-0.6
2,368,392	+		DZA65_RS11170	0.73	-1.1
2,368,392	+		DZA65_RS11170	0.73	-1.1
2,368,393	-		DZA65_RS11170	0.73	-0.2
2,368,423	-		DZA65_RS11170	0.76	-1.1
2,368,429	+		DZA65_RS11170	0.77	+0.0
2,368,429	+		DZA65_RS11170	0.77	-0.9
2,368,429	+		DZA65_RS11170	0.77	-0.7
2,368,551	+				-0.4
2,368,551	+				-0.2
2,368,551	+				+0.4
2,368,551	+				-0.9
2,368,552	-				+0.1
2,368,552	-				-1.3
2,368,652	+				-1.1
2,368,652	+				-2.1
2,368,661	+				+0.2
2,368,708	+				-2.5
2,368,757	+				+0.8
2,368,758	-				-1.1
2,368,758	-				-0.6
2,368,758	-				-2.3
2,368,763	+				-1.2
2,368,763	+				+0.5
2,368,763	+				+0.1
2,368,763	+				+0.3
2,368,763	+				-1.5
2,368,763	+				-1.5
2,368,763	+				-1.1
2,368,763	+				-0.1
2,368,763	+				+0.0
2,368,764	-				-1.2
2,368,764	-				-1.2
2,368,764	-				-0.3
2,368,764	-				+0.0
2,368,764	-				-0.3
2,368,764	-				+0.5
2,368,764	-				-1.0
2,368,764	-				+1.1
2,368,806	+				+2.1
2,368,807	-				+0.3
2,368,807	-				-1.1
2,368,807	-				-0.1
2,368,850	-				-1.6
2,368,903	-				-0.1
2,368,938	+				-2.1
2,368,939	-				+1.0
2,368,943	+				-0.8
2,369,009	+		DZA65_RS11175	0.18	+0.2
2,369,009	+		DZA65_RS11175	0.18	+1.1
2,369,009	+		DZA65_RS11175	0.18	-1.3
2,369,028	+		DZA65_RS11175	0.23	-0.2
2,369,198	+		DZA65_RS11175	0.61	-3.3
2,369,198	+		DZA65_RS11175	0.61	-0.6
2,369,198	+		DZA65_RS11175	0.61	-0.6
2,369,198	+		DZA65_RS11175	0.61	+0.0
2,369,198	+		DZA65_RS11175	0.61	-2.1
2,369,198	+		DZA65_RS11175	0.61	-1.3
2,369,210	+		DZA65_RS11175	0.64	-1.5
2,369,210	+		DZA65_RS11175	0.64	-1.3
2,369,210	+		DZA65_RS11175	0.64	-1.3
2,369,321	-		DZA65_RS11175	0.89	+0.1
2,369,340	+				-0.9
2,369,341	-				+0.6
2,369,362	+				-0.1
2,369,362	+				-0.9
2,369,376	+				+0.2
2,369,377	-				-0.9
2,369,398	-				-1.1
2,369,398	-				+0.3
2,369,458	+		DZA65_RS11180	0.19	-2.1
2,369,459	-		DZA65_RS11180	0.20	+0.9
2,369,473	+		DZA65_RS11180	0.23	-0.8
2,369,473	+		DZA65_RS11180	0.23	+0.1
2,369,473	+		DZA65_RS11180	0.23	+1.5
2,369,474	-		DZA65_RS11180	0.23	+0.8
2,369,475	+		DZA65_RS11180	0.23	-0.0
2,369,475	+		DZA65_RS11180	0.23	+0.1
2,369,475	+		DZA65_RS11180	0.23	+0.5
2,369,475	+		DZA65_RS11180	0.23	-0.4
2,369,475	+		DZA65_RS11180	0.23	-0.1
2,369,475	+		DZA65_RS11180	0.23	+0.5
2,369,475	+		DZA65_RS11180	0.23	-0.2
2,369,476	-		DZA65_RS11180	0.23	-0.5
2,369,476	-		DZA65_RS11180	0.23	-0.2
2,369,476	-		DZA65_RS11180	0.23	-0.6
2,369,518	+		DZA65_RS11180	0.32	+0.0
2,369,518	+		DZA65_RS11180	0.32	-2.1
2,369,519	-		DZA65_RS11180	0.32	-1.3
2,369,519	-		DZA65_RS11180	0.32	+0.2
2,369,550	+		DZA65_RS11180	0.39	-1.5
2,369,550	+		DZA65_RS11180	0.39	-1.4
2,369,551	-		DZA65_RS11180	0.39	+0.5
2,369,551	-		DZA65_RS11180	0.39	-3.3
2,369,552	+		DZA65_RS11180	0.39	+0.3
2,369,552	+		DZA65_RS11180	0.39	-1.5
2,369,553	-		DZA65_RS11180	0.39	-0.9
2,369,564	+		DZA65_RS11180	0.42	+0.5
2,369,565	-		DZA65_RS11180	0.42	-0.1
2,369,565	-		DZA65_RS11180	0.42	+1.6
2,369,585	+		DZA65_RS11180	0.46	-1.4
2,369,586	-		DZA65_RS11180	0.46	-1.1
2,369,600	+		DZA65_RS11180	0.49	+0.5