Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS07315

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
1,520,733	+		DZA65_RS07305	0.75	+0.8
1,520,734	-		DZA65_RS07305	0.75	-0.4
1,520,734	-		DZA65_RS07305	0.75	+0.4
1,520,799	-		DZA65_RS07305	0.80	+1.5
1,520,906	+		DZA65_RS07305	0.90	+0.0
1,520,906	+		DZA65_RS07305	0.90	-0.6
1,520,970	+				-0.4
1,520,970	+				+0.4
1,520,971	-				+0.2
1,520,971	-				-0.7
1,521,077	-				-0.8
1,521,100	+				-0.2
1,521,101	-				-2.5
1,521,130	+				+0.4
1,521,130	+				-0.2
1,521,131	-				+1.1
1,521,138	+				-1.4
1,521,150	+				-1.2
1,521,151	-				+0.6
1,521,151	-				-0.5
1,521,151	-				-0.6
1,521,153	+				-0.2
1,521,154	-				-0.9
1,521,154	-				-1.5
1,521,154	-				-0.2
1,521,169	+				-1.5
1,521,169	+				-1.6
1,521,170	-				+0.0
1,521,170	-				-0.3
1,521,176	+				-1.6
1,521,176	+				-1.2
1,521,176	+				-0.5
1,521,176	+				-1.0
1,521,177	-				-1.6
1,521,185	+				+0.7
1,521,185	+				-1.2
1,521,186	-				-0.8
1,521,186	-				-0.2
1,521,186	-				+0.7
1,521,186	-				-2.1
1,521,186	-				-0.2
1,521,225	+		DZA65_RS07310	0.13	-0.4
1,521,225	+		DZA65_RS07310	0.13	-1.4
1,521,254	+		DZA65_RS07310	0.20	-0.8
1,521,262	+		DZA65_RS07310	0.22	-0.2
1,521,265	+		DZA65_RS07310	0.23	-0.4
1,521,273	+		DZA65_RS07310	0.25	-0.4
1,521,273	+		DZA65_RS07310	0.25	-0.5
1,521,273	+		DZA65_RS07310	0.25	-0.1
1,521,273	+		DZA65_RS07310	0.25	+0.1
1,521,273	+		DZA65_RS07310	0.25	+0.1
1,521,273	+		DZA65_RS07310	0.25	-0.4
1,521,273	+		DZA65_RS07310	0.25	-1.2
1,521,273	+		DZA65_RS07310	0.25	+0.1
1,521,273	+		DZA65_RS07310	0.25	-0.1
1,521,273	+		DZA65_RS07310	0.25	-0.2
1,521,273	+		DZA65_RS07310	0.25	+0.0
1,521,274	-		DZA65_RS07310	0.25	+0.4
1,521,274	-		DZA65_RS07310	0.25	+1.3
1,521,274	-		DZA65_RS07310	0.25	-1.0
1,521,274	-		DZA65_RS07310	0.25	-0.2
1,521,274	-		DZA65_RS07310	0.25	-1.2
1,521,289	+		DZA65_RS07310	0.29	-0.5
1,521,292	+		DZA65_RS07310	0.30	-1.8
1,521,292	+		DZA65_RS07310	0.30	-2.9
1,521,292	+		DZA65_RS07310	0.30	-0.8
1,521,293	-		DZA65_RS07310	0.30	-1.1
1,521,293	-		DZA65_RS07310	0.30	+0.8
1,521,293	-		DZA65_RS07310	0.30	-0.4
1,521,293	-		DZA65_RS07310	0.30	-0.0
1,521,346	-		DZA65_RS07310	0.43	+0.1
1,521,385	-		DZA65_RS07310	0.53	-0.1
1,521,385	-		DZA65_RS07310	0.53	+1.4
1,521,391	+		DZA65_RS07310	0.54	+0.4
1,521,391	+		DZA65_RS07310	0.54	-0.9
1,521,391	+		DZA65_RS07310	0.54	-0.0
1,521,493	-		DZA65_RS07310	0.80	-0.6
1,521,511	+		DZA65_RS07310	0.84	-1.5
1,521,511	+		DZA65_RS07310	0.84	-0.6
1,521,511	+		DZA65_RS07310	0.84	+0.0
1,521,512	-		DZA65_RS07310	0.84	-0.3
1,521,512	-		DZA65_RS07310	0.84	-0.8
1,521,512	-		DZA65_RS07310	0.84	+0.8
1,521,515	+		DZA65_RS07310	0.85	-2.0
1,521,515	+		DZA65_RS07310	0.85	-1.2
1,521,515	+		DZA65_RS07310	0.85	+0.8
1,521,515	+		DZA65_RS07310	0.85	-1.5
1,521,515	+		DZA65_RS07310	0.85	+0.2
1,521,515	+		DZA65_RS07310	0.85	-0.8
1,521,515	+		DZA65_RS07310	0.85	-0.4
1,521,515	+		DZA65_RS07310	0.85	-0.2
1,521,515	+		DZA65_RS07310	0.85	-1.0
1,521,516	-		DZA65_RS07310	0.85	-0.4
1,521,516	-		DZA65_RS07310	0.85	+0.3
1,521,516	-		DZA65_RS07310	0.85	-1.2
1,521,516	-		DZA65_RS07310	0.85	+0.1
1,521,659	+				-1.5
1,521,680	+				+0.1
1,521,781	+		DZA65_RS07315	0.25	-0.7
1,521,782	-		DZA65_RS07315	0.25	-0.7
1,521,806	-		DZA65_RS07315	0.32	+0.0
1,521,839	+		DZA65_RS07315	0.43	-1.8
1,521,840	-		DZA65_RS07315	0.43	+0.2
1,521,840	-		DZA65_RS07315	0.43	-0.0
1,521,941	+		DZA65_RS07315	0.74	-1.5
1,521,942	-		DZA65_RS07315	0.74	-1.0
1,521,989	+		DZA65_RS07315	0.88	-0.7
1,522,016	+				+1.8
1,522,050	+				+0.8
1,522,050	+				-1.2
1,522,050	+				-0.1
1,522,051	-				+0.1
1,522,051	-				-0.1
1,522,051	-				-0.1
1,522,080	+				-0.2
1,522,080	+				+0.8
1,522,081	-				-1.2
1,522,081	-				-0.1
1,522,099	-				+0.8
1,522,100	+				-1.7
1,522,100	+				-0.4
1,522,101	-				+0.5
1,522,101	-				+0.6
1,522,101	-				-0.9
1,522,101	-				-0.4
1,522,133	+		DZA65_RS07320	0.12	-0.7
1,522,134	-		DZA65_RS07320	0.13	+0.8
1,522,158	+		DZA65_RS07320	0.17	+0.5
1,522,161	+		DZA65_RS07320	0.18	-1.2
1,522,185	+		DZA65_RS07320	0.23	+0.1
1,522,197	+		DZA65_RS07320	0.25	-0.1
1,522,201	-		DZA65_RS07320	0.26	-0.2
1,522,211	-		DZA65_RS07320	0.28	+0.6
1,522,211	-		DZA65_RS07320	0.28	+0.5
1,522,242	+		DZA65_RS07320	0.35	-0.6
1,522,243	-		DZA65_RS07320	0.35	-0.8
1,522,243	-		DZA65_RS07320	0.35	-1.2
1,522,262	+		DZA65_RS07320	0.39	-0.8
1,522,263	-		DZA65_RS07320	0.39	-0.6
1,522,380	+		DZA65_RS07320	0.63	-1.8
1,522,383	-		DZA65_RS07320	0.63	-0.2
1,522,426	-		DZA65_RS07320	0.72	+1.6
1,522,437	-		DZA65_RS07320	0.74	-1.1
1,522,437	-		DZA65_RS07320	0.74	-0.2
1,522,437	-		DZA65_RS07320	0.74	-0.5
1,522,504	+		DZA65_RS07320	0.88	-1.3
1,522,505	-		DZA65_RS07320	0.88	+0.1
1,522,507	-		DZA65_RS07320	0.88	-1.1
1,522,511	-		DZA65_RS07320	0.89	-0.6
1,522,624	-				+0.8
1,522,648	-				-0.5
1,522,651	+				-0.5
1,522,651	+				+0.7
1,522,652	-				-0.7
1,522,707	+				-1.2
1,522,708	-				+0.0
1,522,708	-				-1.2
1,522,733	+				-2.0
1,522,796	-				-0.6
1,522,854	+				-0.3
1,522,855	-				+1.5
1,522,856	+				-0.1
1,522,856	+				+0.3
1,522,873	+				-0.1
1,522,938	-				-1.3
1,522,991	+				+0.4
1,522,996	-				+0.4
1,522,999	-				+1.5