Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS07255

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
1,506,902	+				-0.6
1,506,903	-				-0.4
1,506,920	+				-1.8
1,506,920	+				-2.2
1,506,920	+				+0.2
1,506,920	+				+0.1
1,506,920	+				-2.0
1,506,921	-				-0.2
1,506,921	-				+0.5
1,506,938	+				+1.2
1,506,939	-				-1.3
1,507,173	-		DZA65_RS07250	0.28	-1.8
1,507,173	-		DZA65_RS07250	0.28	+0.7
1,507,173	-		DZA65_RS07250	0.28	+0.8
1,507,173	-		DZA65_RS07250	0.28	-0.6
1,507,221	+		DZA65_RS07250	0.33	-1.4
1,507,222	-		DZA65_RS07250	0.33	-1.2
1,507,364	-		DZA65_RS07250	0.47	+0.0
1,507,562	+		DZA65_RS07250	0.66	-0.2
1,507,597	+		DZA65_RS07250	0.70	-0.4
1,507,597	+				+1.4
1,507,597	+		DZA65_RS07250	0.70	-1.5
1,507,597	+		DZA65_RS07250	0.70	+0.2
1,507,597	+		DZA65_RS07250	0.70	-0.6
1,507,597	+		DZA65_RS07250	0.70	+1.1
1,507,598	-		DZA65_RS07250	0.70	+0.0
1,507,598	-		DZA65_RS07250	0.70	-0.9
1,507,598	-		DZA65_RS07250	0.70	-0.2
1,507,598	-		DZA65_RS07250	0.70	-1.2
1,507,598	-		DZA65_RS07250	0.70	-0.0
1,507,660	+		DZA65_RS07250	0.76	-0.1
1,507,660	+		DZA65_RS07250	0.76	+0.4
1,507,660	+		DZA65_RS07250	0.76	-1.5
1,507,660	+		DZA65_RS07250	0.76	-0.5
1,507,662	+		DZA65_RS07250	0.76	-0.0
1,507,662	+		DZA65_RS07250	0.76	-0.2
1,507,663	-		DZA65_RS07250	0.76	+0.6
1,507,915	+				+2.1
1,507,915	+				+0.6
1,507,915	+				-0.4
1,507,915	+				-1.2
1,507,915	+				-1.5
1,507,916	-				-2.2
1,507,916	-				+0.4
1,507,916	-				-2.0
1,507,916	-				+0.2
1,507,916	-				-1.5
1,507,916	-				-2.0
1,507,916	-				-0.6
1,507,917	+				-0.1
1,507,917	+				+0.3
1,507,918	-				-2.0
1,507,918	-				+0.8
1,507,918	-				+0.5
1,508,069	+		DZA65_RS07255	0.15	-0.5
1,508,110	+		DZA65_RS07255	0.19	-0.3
1,508,110	+		DZA65_RS07255	0.19	-0.1
1,508,162	+		DZA65_RS07255	0.24	+0.6
1,508,276	+		DZA65_RS07255	0.34	-0.2
1,508,276	+		DZA65_RS07255	0.34	+0.2
1,508,277	-		DZA65_RS07255	0.34	+0.2
1,508,488	+		DZA65_RS07255	0.54	+0.3
1,508,489	-		DZA65_RS07255	0.54	+0.8
1,508,595	+		DZA65_RS07255	0.63	-0.4
1,508,595	+		DZA65_RS07255	0.63	-0.9
1,508,595	+		DZA65_RS07255	0.63	+1.2
1,508,595	+		DZA65_RS07255	0.63	-0.2
1,508,595	+		DZA65_RS07255	0.63	+0.2
1,508,595	+		DZA65_RS07255	0.63	+0.8
1,508,595	+		DZA65_RS07255	0.63	-3.0
1,508,595	+		DZA65_RS07255	0.63	+1.6
1,508,595	+		DZA65_RS07255	0.63	-2.1
1,508,596	-		DZA65_RS07255	0.64	+0.3
1,508,596	-		DZA65_RS07255	0.64	-1.3
1,508,596	-		DZA65_RS07255	0.64	-0.2
1,508,596	-		DZA65_RS07255	0.64	-2.2
1,508,596	-		DZA65_RS07255	0.64	+0.8
1,508,596	-		DZA65_RS07255	0.64	+2.3
1,508,606	+		DZA65_RS07255	0.64	-1.3
1,508,606	+		DZA65_RS07255	0.64	+1.1
1,508,658	+		DZA65_RS07255	0.69	-0.4
1,508,659	-		DZA65_RS07255	0.69	-0.4
1,508,681	+		DZA65_RS07255	0.71	+0.1
1,508,827	+				+0.5
1,508,827	+		DZA65_RS07255	0.85	+0.1
1,508,827	+		DZA65_RS07255	0.85	+0.6
1,508,827	+		DZA65_RS07255	0.85	+1.0
1,508,827	+		DZA65_RS07255	0.85	+0.3
1,508,827	+		DZA65_RS07255	0.85	+0.8
1,508,828	-		DZA65_RS07255	0.85	-1.0
1,508,828	-		DZA65_RS07255	0.85	+1.3
1,508,828	-		DZA65_RS07255	0.85	-2.6
1,508,860	+		DZA65_RS07255	0.88	-0.4
1,508,861	-		DZA65_RS07255	0.88	-0.2
1,508,912	+				-0.5
1,508,912	+				+0.3
1,508,912	+				+0.8
1,508,913	-				-0.5
1,508,942	+				+0.2
1,508,942	+				-0.2
1,508,942	+				+1.1
1,508,942	+				+1.0
1,508,942	+				-1.5
1,508,942	+				-1.8
1,508,942	+				-0.8
1,508,942	+				-2.2
1,508,942	+				-0.2
1,508,942	+				+1.8
1,508,942	+				+0.6
1,508,942	+				-0.6
1,508,942	+				-1.3
1,508,942	+				+0.1
1,508,942	+				-2.2
1,508,942	+				+0.8
1,508,942	+				-0.1
1,508,942	+				-1.2
1,508,942	+				-1.0
1,508,942	+				+0.1
1,508,943	-				-0.5
1,508,943	-				+1.1
1,508,943	-				-0.3
1,508,943	-				-0.8
1,508,943	-				-0.5
1,508,943	-				-1.5
1,508,943	-				+0.1
1,508,943	-				-0.2
1,508,943	-				-0.2
1,508,943	-				+0.8
1,508,943	-				-0.0
1,508,943	-				-0.6
1,508,943	-				-1.2
1,508,943	-				-0.4
1,508,943	-				+1.8
1,508,943	-				-0.2
1,508,943	-				-1.2
1,508,943	-				-0.5
1,508,943	-				-0.7
1,508,943	-				-1.5
1,508,944	+				-1.5
1,508,945	-				+0.1
1,508,959	+				+1.6
1,508,960	-				-0.7
1,508,990	-				+0.1
1,508,990	-				-0.2
1,508,991	+				+0.1
1,508,991	+				-3.3
1,509,111	+				+0.0
1,509,111	+				+1.5
1,509,111	+				+0.5
1,509,177	+		DZA65_RS07260	0.13	+0.6
1,509,178	-		DZA65_RS07260	0.13	-0.2
1,509,244	+		DZA65_RS07260	0.17	-0.5
1,509,244	+		DZA65_RS07260	0.17	-0.1
1,509,244	+		DZA65_RS07260	0.17	+0.4
1,509,244	+		DZA65_RS07260	0.17	-0.8
1,509,244	+		DZA65_RS07260	0.17	-1.4
1,509,244	+		DZA65_RS07260	0.17	+0.3
1,509,244	+		DZA65_RS07260	0.17	+0.2
1,509,244	+		DZA65_RS07260	0.17	+1.0
1,509,244	+		DZA65_RS07260	0.17	-0.5
1,509,245	-		DZA65_RS07260	0.17	-0.4
1,509,245	-		DZA65_RS07260	0.17	+1.1
1,509,245	-		DZA65_RS07260	0.17	+0.8
1,509,399	+		DZA65_RS07260	0.28	-1.5
1,509,399	+		DZA65_RS07260	0.28	+0.1
1,509,399	+		DZA65_RS07260	0.28	-1.1
1,509,399	+		DZA65_RS07260	0.28	-2.9
1,509,400	-		DZA65_RS07260	0.28	-0.0
1,509,575	+		DZA65_RS07260	0.39	+0.6
1,509,575	+		DZA65_RS07260	0.39	+0.1
1,509,575	+		DZA65_RS07260	0.39	-0.9
1,509,575	+		DZA65_RS07260	0.39	-0.5
1,509,575	+		DZA65_RS07260	0.39	+0.8
1,509,575	+		DZA65_RS07260	0.39	-1.1
1,509,575	+		DZA65_RS07260	0.39	+0.7
1,509,575	+		DZA65_RS07260	0.39	+1.1
1,509,575	+		DZA65_RS07260	0.39	-1.1
1,509,575	+		DZA65_RS07260	0.39	+0.4
1,509,575	+		DZA65_RS07260	0.39	-0.2
1,509,576	-		DZA65_RS07260	0.39	-0.2
1,509,576	-		DZA65_RS07260	0.39	-1.4
1,509,576	-		DZA65_RS07260	0.39	-0.6
1,509,576	-		DZA65_RS07260	0.39	+0.8
1,509,576	-		DZA65_RS07260	0.39	-1.3
1,509,576	-		DZA65_RS07260	0.39	+0.9
1,509,576	-		DZA65_RS07260	0.39	-0.6
1,509,666	+				-0.2
1,509,667	-				-0.5
1,509,678	-		DZA65_RS07260	0.46	-1.0
1,509,678	-		DZA65_RS07260	0.46	-0.2
1,509,798	+		DZA65_RS07260	0.54	-0.4
1,509,851	-		DZA65_RS07260	0.57	-2.3
1,509,895	+		DZA65_RS07260	0.60	-0.1
1,509,895	+		DZA65_RS07260	0.60	+0.0
1,509,895	+		DZA65_RS07260	0.60	-1.8
1,509,895	+		DZA65_RS07260	0.60	-0.6
1,509,895	+		DZA65_RS07260	0.60	+1.1
1,509,896	-		DZA65_RS07260	0.60	+1.1
1,509,896	-		DZA65_RS07260	0.60	-1.3
1,509,896	-		DZA65_RS07260	0.60	+0.2
1,509,896	-		DZA65_RS07260	0.60	-1.3
1,509,916	+		DZA65_RS07260	0.62	-0.8
1,509,916	+		DZA65_RS07260	0.62	-0.2
1,509,917	-		DZA65_RS07260	0.62	-0.2
1,509,917	-		DZA65_RS07260	0.62	-0.3
1,509,937	+		DZA65_RS07260	0.63	-0.6
1,509,937	+		DZA65_RS07260	0.63	-0.0
1,509,938	-		DZA65_RS07260	0.63	-0.2
1,509,938	-		DZA65_RS07260	0.63	+0.5
1,509,938	-		DZA65_RS07260	0.63	-0.1
1,509,943	+		DZA65_RS07260	0.64	-0.2
1,509,943	+		DZA65_RS07260	0.64	-0.6
1,509,943	+		DZA65_RS07260	0.64	-0.2
1,509,943	+		DZA65_RS07260	0.64	-1.1
1,509,944	-		DZA65_RS07260	0.64	-1.5
1,509,944	-		DZA65_RS07260	0.64	-0.2