Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS06550

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
1,360,304	-		DZA65_RS06545	0.38	-0.4
1,360,418	+		DZA65_RS06545	0.47	+0.4
1,360,418	+		DZA65_RS06545	0.47	+0.2
1,360,420	+		DZA65_RS06545	0.48	-0.4
1,360,420	+		DZA65_RS06545	0.48	+0.4
1,360,420	+		DZA65_RS06545	0.48	-0.1
1,360,420	+		DZA65_RS06545	0.48	-1.7
1,360,421	-		DZA65_RS06545	0.48	-0.7
1,360,421	-		DZA65_RS06545	0.48	-0.4
1,360,421	-		DZA65_RS06545	0.48	-0.4
1,360,421	-		DZA65_RS06545	0.48	-0.1
1,360,430	-		DZA65_RS06545	0.48	+0.7
1,360,430	-		DZA65_RS06545	0.48	-0.1
1,360,492	+		DZA65_RS06545	0.54	-0.8
1,360,492	+				+1.9
1,360,493	-		DZA65_RS06545	0.54	+0.1
1,360,493	-		DZA65_RS06545	0.54	-0.1
1,360,493	-		DZA65_RS06545	0.54	-0.2
1,360,493	-		DZA65_RS06545	0.54	+0.2
1,360,493	-		DZA65_RS06545	0.54	-1.2
1,360,543	-		DZA65_RS06545	0.58	+0.2
1,360,557	-		DZA65_RS06545	0.59	+0.7
1,360,561	+		DZA65_RS06545	0.59	-1.7
1,360,562	-		DZA65_RS06545	0.59	-0.7
1,360,649	+		DZA65_RS06545	0.67	-2.7
1,360,658	+		DZA65_RS06545	0.67	-0.6
1,360,659	-		DZA65_RS06545	0.67	-0.2
1,360,659	-		DZA65_RS06545	0.67	-0.3
1,360,667	+		DZA65_RS06545	0.68	-1.9
1,360,667	+		DZA65_RS06545	0.68	-1.4
1,360,667	+		DZA65_RS06545	0.68	-1.2
1,360,667	+		DZA65_RS06545	0.68	+1.7
1,360,667	+		DZA65_RS06545	0.68	-1.2
1,360,668	-		DZA65_RS06545	0.68	-0.1
1,360,668	-		DZA65_RS06545	0.68	-1.4
1,360,668	-		DZA65_RS06545	0.68	-0.4
1,360,668	-		DZA65_RS06545	0.68	-1.2
1,360,668	-		DZA65_RS06545	0.68	-1.2
1,360,668	-		DZA65_RS06545	0.68	+0.7
1,360,668	-		DZA65_RS06545	0.68	-1.3
1,360,668	-		DZA65_RS06545	0.68	+0.2
1,360,668	-		DZA65_RS06545	0.68	-0.2
1,360,668	-		DZA65_RS06545	0.68	+0.1
1,360,668	-		DZA65_RS06545	0.68	-0.7
1,360,668	-		DZA65_RS06545	0.68	-0.3
1,360,668	-		DZA65_RS06545	0.68	+1.3
1,360,669	+		DZA65_RS06545	0.68	+0.9
1,360,669	+		DZA65_RS06545	0.68	-0.4
1,360,669	+		DZA65_RS06545	0.68	+0.5
1,360,669	+		DZA65_RS06545	0.68	+0.7
1,360,669	+		DZA65_RS06545	0.68	-0.5
1,360,669	+		DZA65_RS06545	0.68	+1.9
1,360,669	+		DZA65_RS06545	0.68	-0.5
1,360,670	-		DZA65_RS06545	0.68	-1.2
1,360,670	-		DZA65_RS06545	0.68	-0.9
1,360,670	-		DZA65_RS06545	0.68	+0.4
1,360,670	-		DZA65_RS06545	0.68	+0.5
1,360,670	-		DZA65_RS06545	0.68	+0.8
1,360,694	+		DZA65_RS06545	0.70	+0.3
1,360,751	+		DZA65_RS06545	0.75	+0.2
1,360,751	+		DZA65_RS06545	0.75	+0.9
1,360,751	+		DZA65_RS06545	0.75	-0.1
1,360,752	-		DZA65_RS06545	0.75	-0.7
1,360,813	+		DZA65_RS06545	0.80	-0.3
1,360,813	+		DZA65_RS06545	0.80	+0.3
1,360,813	+		DZA65_RS06545	0.80	-0.8
1,360,813	+		DZA65_RS06545	0.80	+0.3
1,360,813	+		DZA65_RS06545	0.80	-0.1
1,360,813	+		DZA65_RS06545	0.80	+0.9
1,360,814	-		DZA65_RS06545	0.80	-0.4
1,360,814	-		DZA65_RS06545	0.80	-0.2
1,360,814	-		DZA65_RS06545	0.80	+0.5
1,360,814	-		DZA65_RS06545	0.80	+0.9
1,360,814	-		DZA65_RS06545	0.80	+0.6
1,360,814	-		DZA65_RS06545	0.80	-0.3
1,360,814	-		DZA65_RS06545	0.80	-0.4
1,360,814	-		DZA65_RS06545	0.80	+1.7
1,360,814	-		DZA65_RS06545	0.80	-0.7
1,360,879	-		DZA65_RS06545	0.85	-0.0
1,360,894	+		DZA65_RS06545	0.87	-1.2
1,360,894	+		DZA65_RS06545	0.87	-0.1
1,360,894	+				+0.9
1,360,895	-		DZA65_RS06545	0.87	-0.1
1,360,895	-		DZA65_RS06545	0.87	+0.4
1,360,895	-		DZA65_RS06545	0.87	+0.3
1,360,896	-		DZA65_RS06545	0.87	-0.5
1,360,909	+		DZA65_RS06545	0.88	-0.7
1,360,909	+		DZA65_RS06545	0.88	+0.1
1,360,909	+		DZA65_RS06545	0.88	-0.1
1,360,909	+		DZA65_RS06545	0.88	-2.7
1,360,910	-		DZA65_RS06545	0.88	-0.5
1,360,910	-		DZA65_RS06545	0.88	+0.2
1,360,910	-		DZA65_RS06545	0.88	-0.3
1,360,910	-		DZA65_RS06545	0.88	+0.6
1,360,910	-		DZA65_RS06545	0.88	+0.6
1,360,910	-		DZA65_RS06545	0.88	-0.5
1,360,958	+				+0.8
1,360,958	+				+0.9
1,360,958	+				-0.5
1,360,958	+				+0.2
1,360,958	+				+0.1
1,360,958	+				-0.7
1,360,958	+				+0.6
1,360,958	+				+0.7
1,360,959	-				+0.5
1,360,959	-				-0.2
1,361,018	+				-2.4
1,361,018	+				-0.1
1,361,018	+				+0.7
1,361,018	+				-1.2
1,361,019	-				+0.1
1,361,019	-				+0.2
1,361,019	-				-0.7
1,361,019	-				-0.8
1,361,019	-				+0.5
1,361,028	-				+0.1
1,361,028	-				-0.1
1,361,028	-				-2.2
1,361,043	+				-0.8
1,361,044	-				-0.2
1,361,079	+				+1.1
1,361,079	+				+0.9
1,361,080	-				+0.6
1,361,081	+				+0.4
1,361,081	+				+0.2
1,361,081	+				-1.1
1,361,081	+				-0.8
1,361,081	+				+0.2
1,361,081	+				+0.7
1,361,081	+				+0.7
1,361,082	-				-0.8
1,361,082	-				+0.9
1,361,082	-				-1.2
1,361,082	-				+0.9
1,361,082	-				+0.1
1,361,082	-				+0.2
1,361,082	-				-0.7
1,361,082	-				+0.3
1,361,103	+				-0.7
1,361,103	+				+0.3
1,361,103	+				-1.1
1,361,103	+				-0.8
1,361,104	-				-1.9
1,361,104	-				+0.2
1,361,104	-				-0.7
1,361,105	+				+0.9
1,361,105	+				+0.1
1,361,105	+				+0.0
1,361,105	+				-0.6
1,361,105	+				-0.7
1,361,105	+				-3.0
1,361,105	+				-1.1
1,361,106	-				-0.9
1,361,106	-				+0.8
1,361,137	+				-0.6
1,361,137	+				-0.5
1,361,137	+				+0.3
1,361,137	+				-0.5
1,361,137	+				-0.7
1,361,137	+				+0.8
1,361,137	+				+1.1
1,361,137	+				+0.5
1,361,137	+				-0.2
1,361,137	+				+1.5
1,361,137	+				+0.1
1,361,137	+				-0.7
1,361,138	-				-0.7
1,361,138	-				-1.1
1,361,138	-				-0.7
1,361,177	+				+0.7
1,361,186	+				+0.8
1,361,192	+				-0.0
1,361,192	+				+1.9
1,361,230	+				-0.5
1,361,230	+				-0.8
1,361,230	+				+1.3
1,361,230	+				-0.5
1,361,230	+				-0.7
1,361,230	+				-0.3
1,361,230	+				+0.1
1,361,230	+				-0.6
1,361,231	-				-0.5
1,361,231	-				-0.4
1,361,231	-				+0.9
1,361,231	-				+0.9
1,361,231	-				-0.5
1,361,231	-				-0.9
1,361,231	-				+0.1
1,361,260	+				+1.4
1,361,260	+				-0.9
1,361,261	-				-1.1
1,361,349	+				-1.0
1,361,351	+		DZA65_RS06550	0.10	-0.7
1,361,351	+		DZA65_RS06550	0.10	-0.6
1,361,351	+		DZA65_RS06550	0.10	-1.1
1,361,351	+		DZA65_RS06550	0.10	-2.2
1,361,351	+		DZA65_RS06550	0.10	-0.3
1,361,352	-		DZA65_RS06550	0.10	+0.1
1,361,352	-		DZA65_RS06550	0.10	+1.0
1,361,352	-		DZA65_RS06550	0.10	+0.8
1,361,374	+		DZA65_RS06550	0.12	+0.8
1,361,374	+		DZA65_RS06550	0.12	-0.1
1,361,546	-		DZA65_RS06550	0.27	-0.9
1,361,704	+		DZA65_RS06550	0.40	-2.1
1,361,705	-		DZA65_RS06550	0.40	-0.1
1,361,758	+		DZA65_RS06550	0.45	-1.7
1,361,759	-		DZA65_RS06550	0.45	-0.1
1,361,805	-		DZA65_RS06550	0.49	-0.1
1,361,920	+		DZA65_RS06550	0.59	-0.1
1,361,921	-		DZA65_RS06550	0.59	+0.3
1,361,921	-		DZA65_RS06550	0.59	-1.2
1,361,921	-		DZA65_RS06550	0.59	-0.7
1,361,921	-		DZA65_RS06550	0.59	+0.8
1,361,921	-		DZA65_RS06550	0.59	+0.1
1,361,935	+		DZA65_RS06550	0.60	+0.5
1,361,935	+		DZA65_RS06550	0.60	-0.1
1,361,936	-		DZA65_RS06550	0.60	-0.2
1,361,936	-		DZA65_RS06550	0.60	-0.7
1,361,983	+		DZA65_RS06550	0.64	-0.1
1,361,983	+		DZA65_RS06550	0.64	+1.9
1,361,983	+		DZA65_RS06550	0.64	-1.1
1,361,983	+		DZA65_RS06550	0.64	+1.4
1,361,983	+		DZA65_RS06550	0.64	+1.3
1,361,983	+		DZA65_RS06550	0.64	+0.1
1,361,983	+		DZA65_RS06550	0.64	+0.8
1,361,983	+		DZA65_RS06550	0.64	-0.7
1,361,983	+		DZA65_RS06550	0.64	-1.7
1,361,984	-		DZA65_RS06550	0.64	-1.2
1,361,984	-				-0.4
1,361,984	-		DZA65_RS06550	0.64	-1.4
1,361,984	-		DZA65_RS06550	0.64	-0.5
1,361,984	-				+0.9
1,361,984	-		DZA65_RS06550	0.64	+0.4
1,361,986	-		DZA65_RS06550	0.65	-0.2
1,361,986	-		DZA65_RS06550	0.65	+1.3
1,362,051	+		DZA65_RS06550	0.70	-0.5
1,362,051	+		DZA65_RS06550	0.70	+0.8
1,362,051	+		DZA65_RS06550	0.70	-0.1
1,362,051	+		DZA65_RS06550	0.70	-3.1
1,362,051	+		DZA65_RS06550	0.70	+0.2
1,362,051	+		DZA65_RS06550	0.70	+0.1
1,362,051	+		DZA65_RS06550	0.70	+0.8
1,362,051	+		DZA65_RS06550	0.70	-0.2
1,362,051	+		DZA65_RS06550	0.70	-1.7
1,362,051	+		DZA65_RS06550	0.70	+1.5
1,362,051	+		DZA65_RS06550	0.70	-0.9
1,362,052	-		DZA65_RS06550	0.70	+0.4
1,362,052	-		DZA65_RS06550	0.70	+0.3
1,362,052	-		DZA65_RS06550	0.70	-1.3
1,362,052	-				-0.1
1,362,052	-		DZA65_RS06550	0.70	+0.9
1,362,052	-		DZA65_RS06550	0.70	-1.7
1,362,052	-		DZA65_RS06550	0.70	-0.4
1,362,088	+		DZA65_RS06550	0.73	-1.1
1,362,196	+		DZA65_RS06550	0.83	+0.6
1,362,196	+		DZA65_RS06550	0.83	-0.1
1,362,196	+		DZA65_RS06550	0.83	+1.1
1,362,196	+		DZA65_RS06550	0.83	-0.7
1,362,196	+		DZA65_RS06550	0.83	+0.9
1,362,196	+		DZA65_RS06550	0.83	-0.4
1,362,196	+		DZA65_RS06550	0.83	+1.3
1,362,196	+		DZA65_RS06550	0.83	+0.1
1,362,197	-		DZA65_RS06550	0.83	-0.2
1,362,197	-		DZA65_RS06550	0.83	+0.8
1,362,197	-		DZA65_RS06550	0.83	+1.9
1,362,197	-		DZA65_RS06550	0.83	+0.5
1,362,197	-		DZA65_RS06550	0.83	-0.7
1,362,197	-		DZA65_RS06550	0.83	+0.2
1,362,197	-		DZA65_RS06550	0.83	-1.7
1,362,201	+		DZA65_RS06550	0.83	-1.5
1,362,201	+		DZA65_RS06550	0.83	-1.0
1,362,201	+		DZA65_RS06550	0.83	-0.5
1,362,201	+		DZA65_RS06550	0.83	+1.8
1,362,201	+		DZA65_RS06550	0.83	+0.1
1,362,202	-		DZA65_RS06550	0.83	-0.1
1,362,202	-		DZA65_RS06550	0.83	-0.6
1,362,202	-		DZA65_RS06550	0.83	-0.9
1,362,222	+		DZA65_RS06550	0.85	-0.2
1,362,223	-		DZA65_RS06550	0.85	+0.4
1,362,247	-		DZA65_RS06550	0.87	+0.5
1,362,297	+				+0.1
1,362,297	+				-1.1
1,362,297	+				-2.4
1,362,297	+				+0.9
1,362,297	+				-0.2
1,362,297	+				+0.4
1,362,297	+				+0.5
1,362,298	-				+0.2
1,362,298	-				+0.6
1,362,298	-				+0.1
1,362,298	-				-0.7
1,362,298	-				-1.5
1,362,298	-				-0.1
1,362,392	-				-2.0
1,362,392	-				-1.0
1,362,408	+				-0.7
1,362,410	+				-1.0
1,362,410	+				-1.1
1,362,411	-				-1.3