Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS05940

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
1,224,034	+				-1.0
1,224,080	-				-1.3
1,224,127	+				-0.0
1,224,150	+				-1.0
1,224,164	-				-2.2
1,224,191	+				-1.6
1,224,191	+				-0.4
1,224,192	-				-1.0
1,224,192	-				+0.3
1,224,192	-				-0.0
1,224,192	-				-1.2
1,224,257	-				-1.0
1,224,259	+				-0.6
1,224,259	+				+0.3
1,224,259	+				+0.3
1,224,259	+				+1.0
1,224,259	+				+0.8
1,224,260	-				+0.7
1,224,260	-				-0.8
1,224,260	-				+1.0
1,224,260	-				-0.0
1,224,260	-				-0.0
1,224,260	-				-1.3
1,224,260	-				+0.6
1,224,260	-				-0.7
1,224,260	-				-1.6
1,224,265	+				-0.3
1,224,265	+				+0.2
1,224,265	+				-0.2
1,224,265	+				-0.5
1,224,265	+				+0.4
1,224,265	+				-1.0
1,224,265	+				-1.1
1,224,266	-				+0.2
1,224,266	-				-0.0
1,224,266	-				+0.4
1,224,266	-				-0.8
1,224,266	-				+1.4
1,224,266	-				-2.1
1,224,266	-				-1.6
1,224,269	+				-0.8
1,224,269	+				-0.8
1,224,270	-				+0.5
1,224,470	+		DZA65_RS05935	0.38	-0.6
1,224,471	-		DZA65_RS05935	0.39	-2.6
1,224,471	-		DZA65_RS05935	0.39	+0.6
1,224,471	-		DZA65_RS05935	0.39	+0.5
1,224,487	-		DZA65_RS05935	0.41	+0.3
1,224,687	+		DZA65_RS05935	0.74	-0.2
1,224,839	+				+1.3
1,224,839	+				-0.0
1,224,859	-				+0.3
1,224,861	+				+2.0
1,224,861	+				-0.6
1,224,861	+				-1.8
1,224,861	+				-2.0
1,224,861	+				-0.3
1,224,862	-				-0.8
1,224,862	-				-1.3
1,224,862	-				-1.3
1,224,862	-				-1.3
1,224,862	-				-0.7
1,224,862	-				-2.1
1,224,862	-				-1.3
1,224,862	-				-1.3
1,224,863	+				-0.6
1,224,864	-				-1.0
1,224,864	-				-1.3
1,224,864	-				-1.3
1,224,864	-				-1.8
1,224,927	-		DZA65_RS05940	0.14	+1.0
1,224,936	+		DZA65_RS05940	0.15	-1.4
1,224,936	+		DZA65_RS05940	0.15	-0.3
1,224,936	+		DZA65_RS05940	0.15	-0.8
1,224,936	+		DZA65_RS05940	0.15	-0.3
1,224,936	+		DZA65_RS05940	0.15	-0.8
1,224,936	+		DZA65_RS05940	0.15	-0.6
1,224,937	-		DZA65_RS05940	0.15	-1.3
1,224,937	-		DZA65_RS05940	0.15	-2.2
1,224,937	-		DZA65_RS05940	0.15	-0.9
1,224,937	-		DZA65_RS05940	0.15	-0.5
1,224,937	-		DZA65_RS05940	0.15	-2.0
1,224,938	+		DZA65_RS05940	0.15	-0.8
1,224,938	+		DZA65_RS05940	0.15	-1.8
1,224,938	+		DZA65_RS05940	0.15	-0.4
1,224,938	+		DZA65_RS05940	0.15	-0.6
1,224,938	+		DZA65_RS05940	0.15	-0.2
1,224,938	+		DZA65_RS05940	0.15	-0.0
1,224,938	+		DZA65_RS05940	0.15	-1.3
1,224,938	+		DZA65_RS05940	0.15	-2.4
1,224,938	+		DZA65_RS05940	0.15	+1.0
1,224,939	-		DZA65_RS05940	0.15	-1.0
1,224,939	-		DZA65_RS05940	0.15	-3.6
1,224,939	-		DZA65_RS05940	0.15	-0.3
1,224,939	-		DZA65_RS05940	0.15	-0.8
1,224,991	-		DZA65_RS05940	0.21	-2.0
1,225,025	+		DZA65_RS05940	0.24	-1.9
1,225,025	+		DZA65_RS05940	0.24	-1.2
1,225,025	+		DZA65_RS05940	0.24	+0.4
1,225,025	+		DZA65_RS05940	0.24	-1.4
1,225,025	+		DZA65_RS05940	0.24	-2.0
1,225,025	+		DZA65_RS05940	0.24	-1.3
1,225,025	+		DZA65_RS05940	0.24	-0.0
1,225,025	+		DZA65_RS05940	0.24	-0.2
1,225,026	-		DZA65_RS05940	0.24	-1.3
1,225,026	-		DZA65_RS05940	0.24	-0.3
1,225,026	-		DZA65_RS05940	0.24	-0.2
1,225,026	-		DZA65_RS05940	0.24	-0.6
1,225,026	-		DZA65_RS05940	0.24	-2.5
1,225,026	-		DZA65_RS05940	0.24	-0.9
1,225,026	-		DZA65_RS05940	0.24	-1.6
1,225,026	-		DZA65_RS05940	0.24	+0.4
1,225,026	-		DZA65_RS05940	0.24	-1.9
1,225,026	-		DZA65_RS05940	0.24	+0.2
1,225,050	+		DZA65_RS05940	0.27	-2.3
1,225,164	+		DZA65_RS05940	0.39	-1.2
1,225,164	+		DZA65_RS05940	0.39	-1.8
1,225,216	-		DZA65_RS05940	0.45	-0.5
1,225,302	+		DZA65_RS05940	0.54	-0.9
1,225,303	-		DZA65_RS05940	0.54	-1.5
1,225,441	+		DZA65_RS05940	0.69	-0.6
1,225,441	+		DZA65_RS05940	0.69	-2.0
1,225,441	+		DZA65_RS05940	0.69	-2.6
1,225,441	+		DZA65_RS05940	0.69	-1.3
1,225,442	-		DZA65_RS05940	0.69	-0.2
1,225,488	+		DZA65_RS05940	0.74	-1.8
1,225,495	+		DZA65_RS05940	0.75	-2.7
1,225,496	-		DZA65_RS05940	0.75	+0.5
1,225,569	+		DZA65_RS05940	0.83	-2.3
1,225,569	+		DZA65_RS05940	0.83	-1.0
1,225,569	+		DZA65_RS05940	0.83	-2.4
1,225,569	+		DZA65_RS05940	0.83	-2.0
1,225,575	+		DZA65_RS05940	0.84	-0.0
1,225,575	+		DZA65_RS05940	0.84	+0.4
1,225,575	+		DZA65_RS05940	0.84	-1.0
1,225,575	+		DZA65_RS05940	0.84	-3.0
1,225,576	-		DZA65_RS05940	0.84	-1.0
1,225,576	-		DZA65_RS05940	0.84	+1.0
1,225,576	-		DZA65_RS05940	0.84	-1.0
1,225,599	+		DZA65_RS05940	0.87	-2.0
1,225,600	-		DZA65_RS05940	0.87	-0.8
1,225,630	-		DZA65_RS05940	0.90	-2.6
1,225,645	+				+0.1
1,225,645	+				-1.0
1,225,645	+				-0.6
1,225,645	+				-1.2
1,225,645	+				-2.2
1,225,645	+				-1.0
1,225,645	+				-1.3
1,225,645	+				-1.3
1,225,645	+				-0.4
1,225,645	+				-2.2
1,225,645	+				-1.4
1,225,645	+				-2.6
1,225,646	-				-0.1
1,225,666	+				-1.8
1,225,667	-				-0.3
1,225,667	-				-2.2
1,225,769	+				-2.0
1,225,769	+				+0.6
1,225,769	+				+0.3
1,225,770	-				+0.7
1,225,770	-				-0.0
1,225,770	-				-0.0
1,225,774	+				-2.5
1,225,775	-				+1.0
1,225,779	+				+0.1
1,225,779	+				+0.2
1,225,779	+				-1.0
1,225,779	+				-0.6
1,225,779	+				+0.5
1,225,842	+				-1.0
1,225,842	+				+0.0
1,225,843	-				-0.2
1,225,843	-				+0.1
1,225,910	-				+0.7
1,225,943	-				+0.7
1,225,993	+		DZA65_RS05945	0.20	-0.9
1,225,994	-		DZA65_RS05945	0.20	-0.2
1,226,035	+		DZA65_RS05945	0.28	+1.4
1,226,036	-		DZA65_RS05945	0.29	+0.3
1,226,036	-		DZA65_RS05945	0.29	+0.6
1,226,168	+		DZA65_RS05945	0.55	+0.7
1,226,169	-		DZA65_RS05945	0.56	+0.1
1,226,322	+		DZA65_RS05945	0.87	+0.5
1,226,322	+		DZA65_RS05945	0.87	+0.0
1,226,323	-		DZA65_RS05945	0.87	-0.3
1,226,371	+				+0.4
1,226,394	+				+1.0
1,226,394	+				-0.0
1,226,436	+				-1.4
1,226,466	+				+1.6
1,226,467	-				-0.3
1,226,467	-				-0.0
1,226,539	-				-0.6
1,226,620	+				-0.1
1,226,620	+				+1.2
1,226,620	+				-0.2
1,226,621	-				+0.2
1,226,621	-				-1.3
1,226,621	-				+0.1
1,226,621	-				-1.3
1,226,626	-				-1.4
1,226,629	+				-0.6
1,226,629	+				-2.2
1,226,629	+				+0.3
1,226,629	+				+0.4
1,226,629	+				-0.2
1,226,629	+				+0.7
1,226,630	-				+1.0
1,226,630	-				-0.4
1,226,630	-				+0.1
1,226,630	-				-0.8
1,226,630	-				-0.0
1,226,630	-				-0.2
1,226,630	-				-1.6
1,226,640	-				-0.0
1,226,640	-				-0.5
1,226,640	-				-0.3
1,226,643	+				-1.2
1,226,643	+				+0.5
1,226,643	+				-0.1
1,226,643	+				+2.1
1,226,643	+				-0.4
1,226,644	-				+0.6
1,226,687	+				+1.0
1,226,687	+				+0.1
1,226,687	+				-0.8
1,226,688	-				-0.3
1,226,688	-				-0.0
1,226,706	+				-1.3
1,226,706	+				-0.3
1,226,706	+				-1.0
1,226,706	+				-1.8
1,226,706	+				+0.7
1,226,707	-				-0.8
1,226,707	-				-1.1