Experiment: M9+glycerol
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DZA65_RS00825 and DZA65_RS00830 are separated by 231 nucleotides DZA65_RS00830 and DZA65_RS00835 are separated by 2 nucleotides
DZA65_RS00825: DZA65_RS00825 - ADP-glyceromanno-heptose 6-epimerase, at 185,144 to 186,076
_RS00825
DZA65_RS00830: DZA65_RS00830 - divergent polysaccharide deacetylase family protein, at 186,308 to 187,297
_RS00830
DZA65_RS00835: DZA65_RS00835 - murein hydrolase activator EnvC, at 187,300 to 188,574
_RS00835
Position (kb) 186
187
188 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 186.091 kb on - strand at 186.134 kb on - strand at 186.139 kb on - strand at 186.182 kb on + strand at 186.182 kb on + strand at 186.182 kb on + strand at 186.182 kb on + strand at 186.245 kb on + strand at 186.245 kb on + strand at 186.246 kb on - strand at 186.246 kb on - strand at 186.282 kb on + strand at 186.283 kb on - strand at 186.283 kb on - strand at 186.283 kb on - strand at 186.342 kb on + strand at 186.342 kb on + strand at 186.342 kb on + strand at 186.343 kb on - strand at 186.370 kb on + strand at 186.370 kb on + strand at 186.371 kb on - strand at 186.371 kb on - strand at 186.371 kb on - strand at 186.389 kb on + strand at 186.389 kb on + strand at 186.389 kb on + strand at 186.390 kb on - strand at 186.390 kb on - strand at 186.390 kb on - strand at 186.407 kb on - strand, within DZA65_RS00830 at 186.407 kb on - strand, within DZA65_RS00830 at 186.489 kb on + strand, within DZA65_RS00830 at 186.489 kb on + strand, within DZA65_RS00830 at 186.489 kb on + strand, within DZA65_RS00830 at 186.489 kb on + strand, within DZA65_RS00830 at 186.490 kb on - strand, within DZA65_RS00830 at 186.490 kb on - strand, within DZA65_RS00830 at 186.490 kb on - strand, within DZA65_RS00830 at 186.508 kb on - strand, within DZA65_RS00830 at 186.508 kb on - strand, within DZA65_RS00830 at 186.650 kb on + strand, within DZA65_RS00830 at 186.650 kb on + strand, within DZA65_RS00830 at 186.651 kb on - strand, within DZA65_RS00830 at 186.651 kb on - strand, within DZA65_RS00830 at 186.651 kb on - strand, within DZA65_RS00830 at 186.724 kb on + strand, within DZA65_RS00830 at 186.724 kb on + strand, within DZA65_RS00830 at 186.725 kb on - strand, within DZA65_RS00830 at 186.799 kb on - strand, within DZA65_RS00830 at 186.871 kb on + strand, within DZA65_RS00830 at 186.872 kb on - strand, within DZA65_RS00830 at 186.895 kb on - strand, within DZA65_RS00830 at 187.063 kb on - strand, within DZA65_RS00830 at 187.228 kb on + strand at 187.228 kb on + strand at 187.228 kb on + strand at 187.229 kb on - strand at 187.229 kb on - strand at 187.258 kb on + strand at 187.258 kb on + strand at 187.258 kb on + strand at 187.259 kb on - strand at 187.259 kb on - strand at 187.259 kb on - strand at 187.286 kb on + strand at 187.286 kb on + strand at 187.286 kb on + strand at 187.287 kb on - strand at 187.301 kb on + strand at 187.302 kb on - strand at 187.302 kb on - strand at 187.302 kb on - strand at 187.302 kb on - strand at 187.309 kb on + strand at 187.310 kb on - strand at 187.310 kb on - strand at 187.358 kb on + strand at 187.456 kb on - strand, within DZA65_RS00835 at 187.457 kb on + strand, within DZA65_RS00835 at 187.457 kb on + strand, within DZA65_RS00835 at 187.457 kb on + strand, within DZA65_RS00835 at 187.463 kb on + strand, within DZA65_RS00835 at 187.464 kb on - strand, within DZA65_RS00835 at 187.464 kb on - strand, within DZA65_RS00835 at 187.464 kb on - strand, within DZA65_RS00835 at 187.464 kb on - strand, within DZA65_RS00835 at 187.512 kb on - strand, within DZA65_RS00835 at 187.512 kb on - strand, within DZA65_RS00835 at 187.562 kb on - strand, within DZA65_RS00835 at 187.667 kb on + strand, within DZA65_RS00835 at 187.667 kb on + strand, within DZA65_RS00835 at 187.667 kb on + strand, within DZA65_RS00835 at 187.668 kb on - strand at 187.668 kb on - strand, within DZA65_RS00835 at 187.668 kb on - strand, within DZA65_RS00835 at 187.668 kb on - strand, within DZA65_RS00835 at 187.668 kb on - strand, within DZA65_RS00835 at 187.668 kb on - strand, within DZA65_RS00835 at 187.668 kb on - strand, within DZA65_RS00835 at 187.734 kb on + strand, within DZA65_RS00835 at 187.734 kb on + strand, within DZA65_RS00835 at 187.734 kb on + strand, within DZA65_RS00835 at 187.734 kb on + strand, within DZA65_RS00835 at 187.735 kb on - strand, within DZA65_RS00835 at 187.735 kb on - strand, within DZA65_RS00835 at 187.735 kb on - strand, within DZA65_RS00835 at 187.736 kb on + strand, within DZA65_RS00835 at 187.736 kb on + strand, within DZA65_RS00835 at 187.736 kb on + strand, within DZA65_RS00835 at 187.736 kb on + strand, within DZA65_RS00835 at 187.736 kb on + strand, within DZA65_RS00835 at 187.736 kb on + strand, within DZA65_RS00835 at 187.736 kb on + strand, within DZA65_RS00835 at 187.736 kb on + strand, within DZA65_RS00835 at 187.736 kb on + strand, within DZA65_RS00835 at 187.736 kb on + strand, within DZA65_RS00835 at 187.737 kb on - strand, within DZA65_RS00835 at 187.737 kb on - strand, within DZA65_RS00835 at 187.737 kb on - strand, within DZA65_RS00835 at 187.737 kb on - strand, within DZA65_RS00835 at 187.737 kb on - strand, within DZA65_RS00835 at 188.099 kb on + strand, within DZA65_RS00835 at 188.099 kb on + strand, within DZA65_RS00835 at 188.099 kb on + strand, within DZA65_RS00835 at 188.100 kb on - strand, within DZA65_RS00835 at 188.100 kb on - strand, within DZA65_RS00835 at 188.100 kb on - strand, within DZA65_RS00835 at 188.109 kb on - strand, within DZA65_RS00835
Per-strain Table
Position Strand Gene LocusTag Fraction M9+glycerol remove 186,091 - +2.8 186,134 - -0.1 186,139 - +0.9 186,182 + -0.0 186,182 + -1.5 186,182 + -2.4 186,182 + -1.0 186,245 + -1.0 186,245 + -0.4 186,246 - -0.7 186,246 - -1.2 186,282 + -0.8 186,283 - -1.5 186,283 - +0.8 186,283 - -0.4 186,342 + +0.6 186,342 + -1.7 186,342 + -0.2 186,343 - +0.1 186,370 + +0.3 186,370 + -1.2 186,371 - -0.0 186,371 - +0.2 186,371 - +0.7 186,389 + +2.3 186,389 + +0.3 186,389 + +1.3 186,390 - -1.0 186,390 - -0.5 186,390 - -0.2 186,407 - DZA65_RS00830 0.10 +1.3 186,407 - DZA65_RS00830 0.10 +1.3 186,489 + DZA65_RS00830 0.18 +0.3 186,489 + DZA65_RS00830 0.18 -1.0 186,489 + DZA65_RS00830 0.18 +0.3 186,489 + DZA65_RS00830 0.18 +0.3 186,490 - DZA65_RS00830 0.18 +1.0 186,490 - DZA65_RS00830 0.18 +0.2 186,490 - DZA65_RS00830 0.18 +0.2 186,508 - DZA65_RS00830 0.20 +0.5 186,508 - DZA65_RS00830 0.20 +1.0 186,650 + DZA65_RS00830 0.35 +0.6 186,650 + DZA65_RS00830 0.35 -0.4 186,651 - DZA65_RS00830 0.35 -0.2 186,651 - DZA65_RS00830 0.35 +0.9 186,651 - DZA65_RS00830 0.35 +0.5 186,724 + DZA65_RS00830 0.42 +0.0 186,724 + DZA65_RS00830 0.42 +0.8 186,725 - DZA65_RS00830 0.42 +0.8 186,799 - DZA65_RS00830 0.50 -1.8 186,871 + DZA65_RS00830 0.57 +0.3 186,872 - DZA65_RS00830 0.57 -1.0 186,895 - DZA65_RS00830 0.59 +0.7 187,063 - DZA65_RS00830 0.76 +0.6 187,228 + +1.7 187,228 + +0.5 187,228 + -0.4 187,229 - -0.7 187,229 - -0.8 187,258 + -0.7 187,258 + -1.0 187,258 + +0.7 187,259 - -1.4 187,259 - -0.5 187,259 - +0.2 187,286 + +0.5 187,286 + +0.2 187,286 + +0.5 187,287 - -0.2 187,301 + -1.2 187,302 - +0.6 187,302 - -1.1 187,302 - -0.5 187,302 - +0.8 187,309 + +0.5 187,310 - -0.5 187,310 - +0.3 187,358 + -0.5 187,456 - DZA65_RS00835 0.12 -1.0 187,457 + DZA65_RS00835 0.12 +0.7 187,457 + DZA65_RS00835 0.12 +1.9 187,457 + DZA65_RS00835 0.12 -1.7 187,463 + DZA65_RS00835 0.13 +0.5 187,464 - DZA65_RS00835 0.13 -0.5 187,464 - DZA65_RS00835 0.13 +1.3 187,464 - DZA65_RS00835 0.13 -0.9 187,464 - DZA65_RS00835 0.13 +1.3 187,512 - DZA65_RS00835 0.17 -0.5 187,512 - DZA65_RS00835 0.17 -0.1 187,562 - DZA65_RS00835 0.21 +1.6 187,667 + DZA65_RS00835 0.29 +1.1 187,667 + DZA65_RS00835 0.29 +1.0 187,667 + DZA65_RS00835 0.29 -1.7 187,668 - -0.2 187,668 - DZA65_RS00835 0.29 +0.0 187,668 - DZA65_RS00835 0.29 +0.6 187,668 - DZA65_RS00835 0.29 +2.2 187,668 - DZA65_RS00835 0.29 +1.0 187,668 - DZA65_RS00835 0.29 +0.8 187,668 - DZA65_RS00835 0.29 +1.0 187,734 + DZA65_RS00835 0.34 +0.3 187,734 + DZA65_RS00835 0.34 +0.0 187,734 + DZA65_RS00835 0.34 +1.0 187,734 + DZA65_RS00835 0.34 -0.1 187,735 - DZA65_RS00835 0.34 +2.8 187,735 - DZA65_RS00835 0.34 +0.3 187,735 - DZA65_RS00835 0.34 -0.5 187,736 + DZA65_RS00835 0.34 +0.3 187,736 + DZA65_RS00835 0.34 +1.8 187,736 + DZA65_RS00835 0.34 +1.3 187,736 + DZA65_RS00835 0.34 -2.0 187,736 + DZA65_RS00835 0.34 -1.7 187,736 + DZA65_RS00835 0.34 +1.7 187,736 + DZA65_RS00835 0.34 -0.5 187,736 + DZA65_RS00835 0.34 +2.3 187,736 + DZA65_RS00835 0.34 +1.9 187,736 + DZA65_RS00835 0.34 -0.5 187,737 - DZA65_RS00835 0.34 +0.5 187,737 - DZA65_RS00835 0.34 +0.1 187,737 - DZA65_RS00835 0.34 -1.8 187,737 - DZA65_RS00835 0.34 -1.5 187,737 - DZA65_RS00835 0.34 +1.3 188,099 + DZA65_RS00835 0.63 -0.2 188,099 + DZA65_RS00835 0.63 +1.5 188,099 + DZA65_RS00835 0.63 +2.0 188,100 - DZA65_RS00835 0.63 -0.2 188,100 - DZA65_RS00835 0.63 +2.0 188,100 - DZA65_RS00835 0.63 +0.6 188,109 - DZA65_RS00835 0.63 +1.6
Or see this region's nucleotide sequence