Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS20655

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
4,453,582	-				-1.0
4,453,582	-				+0.7
4,453,582	-				-0.0
4,453,584	-				-0.7
4,453,584	-				+0.7
4,453,607	+				+0.8
4,453,607	+				+0.3
4,453,607	+				+0.1
4,453,607	+				-0.3
4,453,608	-				-1.3
4,453,608	-				+1.3
4,453,608	-				-1.0
4,453,608	-				+0.1
4,453,639	+				-1.3
4,453,639	+				+0.9
4,453,640	-				-1.5
4,453,681	+				-0.6
4,453,681	+				+0.6
4,453,681	+				-0.0
4,453,681	+				-0.0
4,453,681	+				-1.5
4,453,741	+				-0.3
4,453,743	+				-1.0
4,453,786	+				-0.9
4,453,786	+				+0.5
4,453,786	+				-1.3
4,453,786	+				+1.5
4,453,786	+				-1.1
4,453,791	+				+1.8
4,453,791	+				-1.0
4,453,801	+				-2.2
4,453,801	+				+0.1
4,453,839	+				+1.8
4,454,495	+				+0.6
4,454,495	+				+0.6
4,454,561	-				+0.4
4,454,584	-				-0.0
4,454,584	-				+1.1
4,454,653	+				+1.3
4,454,653	+				-0.9
4,454,654	-				-1.2
4,454,816	-		DZA65_RS20655	0.19	-1.0
4,454,816	-		DZA65_RS20655	0.19	-0.3
4,454,820	+		DZA65_RS20655	0.19	-1.8
4,454,820	+		DZA65_RS20655	0.19	+0.1
4,454,820	+		DZA65_RS20655	0.19	-2.2
4,454,821	-		DZA65_RS20655	0.20	-1.5
4,454,836	+				-0.0
4,454,897	-		DZA65_RS20655	0.26	-1.5
4,454,952	+		DZA65_RS20655	0.30	-1.6
4,454,953	-		DZA65_RS20655	0.30	-0.6
4,455,043	+		DZA65_RS20655	0.38	-1.8
4,455,044	-		DZA65_RS20655	0.38	-0.2
4,455,076	-		DZA65_RS20655	0.40	-1.9
4,455,082	+		DZA65_RS20655	0.41	-0.6
4,455,082	+		DZA65_RS20655	0.41	-1.0
4,455,082	+		DZA65_RS20655	0.41	-1.9
4,455,082	+		DZA65_RS20655	0.41	-0.9
4,455,082	+		DZA65_RS20655	0.41	-2.3
4,455,082	+		DZA65_RS20655	0.41	-0.8
4,455,082	+		DZA65_RS20655	0.41	-3.0
4,455,082	+		DZA65_RS20655	0.41	-1.5
4,455,082	+		DZA65_RS20655	0.41	-1.0
4,455,082	+		DZA65_RS20655	0.41	-2.4
4,455,082	+		DZA65_RS20655	0.41	-1.3
4,455,083	-		DZA65_RS20655	0.41	-0.7
4,455,083	-		DZA65_RS20655	0.41	-0.5
4,455,083	-		DZA65_RS20655	0.41	-0.4
4,455,083	-		DZA65_RS20655	0.41	-1.8
4,455,083	-		DZA65_RS20655	0.41	-1.1
4,455,083	-		DZA65_RS20655	0.41	-1.0
4,455,083	-		DZA65_RS20655	0.41	-2.3
4,455,083	-		DZA65_RS20655	0.41	+0.9
4,455,083	-		DZA65_RS20655	0.41	-0.1
4,455,084	+		DZA65_RS20655	0.41	-1.5
4,455,084	+		DZA65_RS20655	0.41	-0.6
4,455,084	+		DZA65_RS20655	0.41	+0.1
4,455,084	+		DZA65_RS20655	0.41	-1.7
4,455,084	+		DZA65_RS20655	0.41	-1.7
4,455,084	+		DZA65_RS20655	0.41	+0.0
4,455,084	+		DZA65_RS20655	0.41	-0.7
4,455,084	+		DZA65_RS20655	0.41	+0.1
4,455,084	+		DZA65_RS20655	0.41	-0.5
4,455,084	+		DZA65_RS20655	0.41	-0.1
4,455,084	+		DZA65_RS20655	0.41	-2.4
4,455,084	+		DZA65_RS20655	0.41	-0.7
4,455,084	+		DZA65_RS20655	0.41	-0.3
4,455,085	-		DZA65_RS20655	0.41	-0.6
4,455,085	-		DZA65_RS20655	0.41	-0.8
4,455,085	-		DZA65_RS20655	0.41	-2.5
4,455,085	-		DZA65_RS20655	0.41	-2.3
4,455,085	-		DZA65_RS20655	0.41	-1.5
4,455,085	-		DZA65_RS20655	0.41	+2.3
4,455,085	-		DZA65_RS20655	0.41	+0.3
4,455,085	-		DZA65_RS20655	0.41	-1.3
4,455,085	-		DZA65_RS20655	0.41	-1.0
4,455,085	-		DZA65_RS20655	0.41	-1.3
4,455,085	-		DZA65_RS20655	0.41	-1.3
4,455,085	-		DZA65_RS20655	0.41	-1.2
4,455,150	+		DZA65_RS20655	0.46	-1.2
4,455,336	+		DZA65_RS20655	0.62	-2.5
4,455,337	-		DZA65_RS20655	0.62	-1.5
4,455,374	-		DZA65_RS20655	0.65	-0.8
4,455,393	+		DZA65_RS20655	0.66	-1.0
4,455,393	+		DZA65_RS20655	0.66	-0.7
4,455,394	-		DZA65_RS20655	0.66	+1.3
4,455,394	-		DZA65_RS20655	0.66	+0.7
4,455,394	-		DZA65_RS20655	0.66	-0.2
4,455,394	-		DZA65_RS20655	0.66	-2.5
4,455,417	+		DZA65_RS20655	0.68	-1.0
4,455,417	+		DZA65_RS20655	0.68	-1.0
4,455,418	-		DZA65_RS20655	0.68	-1.0
4,455,562	+		DZA65_RS20655	0.80	+0.3
4,455,562	+		DZA65_RS20655	0.80	-1.5
4,455,562	+		DZA65_RS20655	0.80	+2.9
4,455,563	-		DZA65_RS20655	0.80	-0.9
4,455,674	-		DZA65_RS20655	0.89	-0.1
4,455,674	-		DZA65_RS20655	0.89	-1.7
4,455,675	+		DZA65_RS20655	0.89	-0.7
4,455,675	+		DZA65_RS20655	0.89	-0.7
4,455,675	+		DZA65_RS20655	0.89	+0.2
4,455,675	+		DZA65_RS20655	0.89	-0.4
4,455,675	+		DZA65_RS20655	0.89	-0.6
4,455,675	+		DZA65_RS20655	0.89	-2.2
4,455,675	+		DZA65_RS20655	0.89	-0.6
4,455,675	+		DZA65_RS20655	0.89	-0.2
4,455,675	+		DZA65_RS20655	0.89	+0.2
4,455,675	+		DZA65_RS20655	0.89	-1.7
4,455,676	-		DZA65_RS20655	0.89	+0.3
4,455,676	-		DZA65_RS20655	0.89	-1.5
4,455,676	-		DZA65_RS20655	0.89	+0.6
4,455,676	-		DZA65_RS20655	0.89	-1.0
4,455,744	+				+1.0
4,455,745	-				-1.0
4,455,745	-				-2.7
4,455,758	+				+0.5
4,455,758	+				-0.5
4,455,758	+				-0.9
4,455,758	+				-0.2
4,455,759	-				-2.0
4,455,759	-				-0.0
4,455,759	-				+1.0
4,455,768	+				-0.9
4,455,768	+				-2.0
4,455,768	+				-3.6
4,455,768	+				+0.1
4,455,768	+				-1.5
4,455,768	+				-2.1
4,455,768	+				-0.3
4,455,768	+				-0.8
4,455,769	-				-0.7
4,455,769	-				-2.0
4,455,769	-				+1.0
4,455,769	-				-0.3
4,455,769	-				+0.3
4,455,772	+				-0.9
4,455,772	+				-0.6
4,455,772	+				+0.4
4,455,772	+				-4.1
4,455,772	+				-3.6
4,455,773	-				-0.6
4,455,782	+				+0.2
4,455,782	+				-1.2
4,455,782	+				+0.3
4,455,783	-				-1.0
4,455,846	+				-1.0
4,455,847	-				-0.3
4,455,859	+				-0.5
4,455,860	-				+1.5
4,455,928	-				-2.2
4,455,929	+				-0.6
4,456,279	+		DZA65_RS20660	0.61	+1.2
4,456,339	+		DZA65_RS20660	0.72	+0.9
4,456,376	+		DZA65_RS20660	0.78	-1.1
4,456,411	+		DZA65_RS20660	0.84	+0.9
4,456,412	-		DZA65_RS20660	0.84	-0.5
4,456,449	+				+0.0
4,456,450	-				+0.0
4,456,455	+				+0.3
4,456,455	+				-0.7
4,456,455	+				-0.5
4,456,456	-				-0.8
4,456,464	+				+0.4
4,456,464	+				-0.3
4,456,464	+				+0.8
4,456,464	+				-0.6
4,456,465	-				+0.1
4,456,465	-				+0.0
4,456,465	-				+0.3
4,456,465	-				-2.0
4,456,465	-				+2.9
4,456,465	-				-0.0
4,456,465	-				+0.0
4,456,465	-				+0.6
4,456,465	-				+1.6
4,456,468	+				-0.8
4,456,468	+				+1.0
4,456,469	-				-0.1
4,456,469	-				+0.8
4,456,469	-				+0.5
4,456,469	-				+0.1
4,456,479	+				-0.9
4,456,479	+				+0.3
4,456,479	+				-0.2
4,456,479	+				+1.9
4,456,479	+				-1.0
4,456,479	+				-0.9
4,456,479	+				+1.2
4,456,479	+				+0.6
4,456,480	-				+0.9
4,456,480	-				-1.3
4,456,480	-				-0.5
4,456,480	-				+1.7
4,456,480	-				-1.3
4,456,480	-				+0.8
4,456,480	-				-0.6
4,456,480	-				-1.0
4,456,480	-				-0.7
4,456,490	-				-0.0
4,456,493	+				+1.2
4,456,493	+				-1.3
4,456,493	+				+0.1
4,456,493	+				+0.2
4,456,494	-				+0.3
4,456,494	-				+0.2
4,456,494	-				+0.6
4,456,501	+				+0.5
4,456,501	+				-0.1
4,456,501	+				-0.7
4,456,501	+				-0.6
4,456,501	+				-0.1
4,456,501	+				-0.7
4,456,501	+				+0.3
4,456,501	+				-0.7
4,456,501	+				-1.2
4,456,501	+				-0.4
4,456,502	-				+0.6
4,456,502	-				+1.6
4,456,502	-				+2.0
4,456,502	-				+1.3
4,456,502	-				+0.3
4,456,502	-				+0.3
4,456,502	-				+0.4
4,456,507	+				-0.3
4,456,507	+				+0.3
4,456,508	-				+0.4
4,456,508	-				+0.7
4,456,508	-				-2.2
4,456,508	-				-2.2
4,456,511	+				+1.6
4,456,511	+				+0.7
4,456,511	+				-1.7
4,456,511	+				+4.5
4,456,512	-				-2.0
4,456,512	-				+1.1
4,456,512	-				-1.0
4,456,512	-				-0.9
4,456,551	+				-1.7
4,456,551	+				-0.7
4,456,551	+				-1.5
4,456,551	+				-0.2
4,456,551	+				-0.4
4,456,551	+				+0.3
4,456,552	-				-0.8
4,456,552	-				-1.9
4,456,552	-				+0.7
4,456,555	+				-1.5
4,456,555	+				-0.0
4,456,555	+				-1.0
4,456,555	+				+2.1
4,456,555	+				+1.3
4,456,555	+				+0.3
4,456,555	+				+0.1
4,456,555	+				-3.0
4,456,555	+				-1.7
4,456,556	-				-0.5
4,456,556	-				+1.2
4,456,647	+				+0.6
4,456,647	+				+0.8
4,456,647	+				-0.3
4,456,647	+				-1.7
4,456,648	-				-0.8
4,456,716	+				+1.3
4,456,794	+				-0.6
4,456,795	-				-1.2
4,456,803	+				+0.7
4,456,804	-				+0.1
4,456,804	-				+0.3
4,456,805	+				-2.2
4,456,805	+				+0.3