Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS17160

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
3,705,335	-				+0.7
3,705,362	-				-0.2
3,705,395	+				+0.2
3,705,395	+				-0.5
3,705,395	+				+0.6
3,705,395	+				-0.2
3,705,395	+				-0.2
3,705,395	+				+0.7
3,705,395	+				-1.8
3,705,395	+				-0.2
3,705,395	+				+0.2
3,705,395	+				-1.0
3,705,395	+				-0.5
3,705,395	+				-2.0
3,705,396	-				+0.0
3,705,396	-				-1.9
3,705,396	-				-1.4
3,705,396	-				-1.1
3,705,396	-				-0.8
3,705,396	-				-2.0
3,705,396	-				-1.0
3,705,396	-				-2.3
3,705,398	+				-1.1
3,705,398	+				+1.1
3,705,398	+				-0.7
3,705,398	+				-1.3
3,705,398	+				-0.5
3,705,398	+				+1.6
3,705,414	+				-1.5
3,705,446	+				-1.7
3,705,446	+				-2.0
3,705,447	-				-1.1
3,705,447	-				-1.3
3,705,447	-				-3.0
3,705,519	+				+0.0
3,705,519	+				+0.0
3,705,520	-				-0.8
3,705,546	+		DZA65_RS17155	0.12	-1.3
3,705,546	+		DZA65_RS17155	0.12	-1.3
3,705,547	-		DZA65_RS17155	0.13	+0.5
3,705,591	-		DZA65_RS17155	0.18	-2.3
3,705,598	+		DZA65_RS17155	0.19	-1.3
3,705,638	+		DZA65_RS17155	0.24	-1.4
3,705,639	-		DZA65_RS17155	0.24	-2.8
3,705,646	-		DZA65_RS17155	0.25	-1.5
3,705,661	+		DZA65_RS17155	0.27	-0.3
3,705,708	-		DZA65_RS17155	0.33	-2.1
3,705,773	+		DZA65_RS17155	0.41	-3.9
3,705,773	+		DZA65_RS17155	0.41	-0.1
3,705,774	-		DZA65_RS17155	0.41	-2.4
3,705,784	+		DZA65_RS17155	0.42	-1.5
3,705,784	+		DZA65_RS17155	0.42	-1.3
3,705,784	+		DZA65_RS17155	0.42	-0.5
3,705,784	+		DZA65_RS17155	0.42	-3.1
3,705,784	+		DZA65_RS17155	0.42	-3.1
3,705,784	+		DZA65_RS17155	0.42	-1.3
3,705,785	-		DZA65_RS17155	0.43	-1.5
3,705,785	-		DZA65_RS17155	0.43	-3.3
3,705,785	-		DZA65_RS17155	0.43	-1.5
3,705,785	-		DZA65_RS17155	0.43	-1.3
3,705,882	-		DZA65_RS17155	0.55	-2.0
3,705,882	-		DZA65_RS17155	0.55	-2.8
3,705,882	-		DZA65_RS17155	0.55	-2.7
3,705,882	-		DZA65_RS17155	0.55	-1.5
3,705,896	+		DZA65_RS17155	0.56	+0.3
3,705,976	+		DZA65_RS17155	0.67	-3.0
3,706,121	+		DZA65_RS17155	0.85	-3.0
3,706,185	+				-1.0
3,706,185	+				-1.1
3,706,185	+				-2.5
3,706,185	+				-3.9
3,706,185	+				-0.4
3,706,185	+				+1.0
3,706,185	+				-1.5
3,706,185	+				-1.8
3,706,186	-				-1.1
3,706,186	-				-2.0
3,706,186	-				-1.5
3,706,186	-				-1.3
3,706,227	+				-1.0
3,706,227	+				-0.8
3,706,228	-				-3.0
3,706,228	-				-1.3
3,706,239	+				-2.0
3,706,240	-				-2.4
3,706,334	-				-2.7
3,706,334	-				-1.8
3,706,419	-		DZA65_RS17160	0.19	+0.5
3,706,419	-		DZA65_RS17160	0.19	-3.4
3,706,588	+		DZA65_RS17160	0.39	-0.6
3,706,758	+		DZA65_RS17160	0.59	-1.9
3,706,758	+		DZA65_RS17160	0.59	-2.8
3,706,759	-		DZA65_RS17160	0.59	-1.7
3,706,759	-		DZA65_RS17160	0.59	-2.3
3,706,759	-		DZA65_RS17160	0.59	-1.5
3,706,764	-		DZA65_RS17160	0.59	+0.1
3,706,764	-		DZA65_RS17160	0.59	-3.9
3,706,785	-		DZA65_RS17160	0.62	-1.8
3,706,785	-		DZA65_RS17160	0.62	-2.9
3,706,831	-		DZA65_RS17160	0.67	-3.3
3,706,900	+		DZA65_RS17160	0.75	-3.3
3,706,900	+		DZA65_RS17160	0.75	-2.8
3,706,928	+		DZA65_RS17160	0.78	-2.7
3,706,928	+		DZA65_RS17160	0.78	-2.1
3,706,928	+		DZA65_RS17160	0.78	-1.9
3,706,928	+		DZA65_RS17160	0.78	-1.3
3,706,928	+		DZA65_RS17160	0.78	-2.4
3,706,928	+		DZA65_RS17160	0.78	-1.8
3,706,929	-		DZA65_RS17160	0.79	+0.1
3,706,929	-		DZA65_RS17160	0.79	-2.5
3,706,929	-		DZA65_RS17160	0.79	-1.9
3,706,929	-		DZA65_RS17160	0.79	-2.5
3,706,929	-		DZA65_RS17160	0.79	-2.5
3,706,929	-		DZA65_RS17160	0.79	-3.1
3,706,988	+		DZA65_RS17160	0.85	-1.3
3,706,989	-		DZA65_RS17160	0.86	-2.0
3,706,989	-		DZA65_RS17160	0.86	-1.3
3,706,989	-		DZA65_RS17160	0.86	-1.5
3,707,004	-		DZA65_RS17160	0.87	-1.5
3,707,160	+				-1.5
3,707,160	+				-1.4
3,707,160	+				+0.1
3,707,161	-				-0.5
3,707,161	-				-3.2
3,707,161	-				-3.2
3,707,195	+		DZA65_RS17165	0.15	-2.1
3,707,196	-		DZA65_RS17165	0.15	-2.5
3,707,200	+		DZA65_RS17165	0.17	-1.8
3,707,200	+		DZA65_RS17165	0.17	-1.9
3,707,200	+		DZA65_RS17165	0.17	-0.5
3,707,201	-		DZA65_RS17165	0.17	-0.9
3,707,201	-		DZA65_RS17165	0.17	-3.0
3,707,232	+		DZA65_RS17165	0.25	-1.8
3,707,233	-		DZA65_RS17165	0.25	-1.6
3,707,233	-		DZA65_RS17165	0.25	-3.0
3,707,247	+		DZA65_RS17165	0.29	-1.4
3,707,248	-		DZA65_RS17165	0.29	-1.3
3,707,257	+		DZA65_RS17165	0.31	-1.9
3,707,257	+		DZA65_RS17165	0.31	-1.5
3,707,275	+		DZA65_RS17165	0.36	-2.1
3,707,275	+		DZA65_RS17165	0.36	-1.4
3,707,275	+		DZA65_RS17165	0.36	+1.1
3,707,275	+		DZA65_RS17165	0.36	-1.6
3,707,275	+		DZA65_RS17165	0.36	-2.8
3,707,275	+		DZA65_RS17165	0.36	-3.5
3,707,275	+		DZA65_RS17165	0.36	-1.5
3,707,276	-		DZA65_RS17165	0.36	-1.9
3,707,276	-		DZA65_RS17165	0.36	-1.3
3,707,276	-		DZA65_RS17165	0.36	-1.9
3,707,276	-		DZA65_RS17165	0.36	-1.9
3,707,308	+		DZA65_RS17165	0.45	-0.9
3,707,308	+		DZA65_RS17165	0.45	-1.9
3,707,340	+		DZA65_RS17165	0.53	-1.5
3,707,340	+		DZA65_RS17165	0.53	-3.6
3,707,394	+		DZA65_RS17165	0.67	-0.3
3,707,395	-		DZA65_RS17165	0.68	-1.1
3,707,395	-		DZA65_RS17165	0.68	+0.1
3,707,395	-		DZA65_RS17165	0.68	+0.6
3,707,404	+		DZA65_RS17165	0.70	-1.3
3,707,404	+		DZA65_RS17165	0.70	-0.5
3,707,404	+		DZA65_RS17165	0.70	-1.8
3,707,404	+		DZA65_RS17165	0.70	-1.8
3,707,404	+		DZA65_RS17165	0.70	-1.5
3,707,404	+		DZA65_RS17165	0.70	-1.8
3,707,405	-		DZA65_RS17165	0.70	-1.4
3,707,405	-		DZA65_RS17165	0.70	-2.9
3,707,405	-		DZA65_RS17165	0.70	-0.5
3,707,456	-		DZA65_RS17165	0.84	-1.5
3,707,456	-		DZA65_RS17165	0.84	-0.7
3,707,472	+		DZA65_RS17165	0.88	-4.3
3,707,472	+		DZA65_RS17165	0.88	-2.5
3,707,472	+		DZA65_RS17165	0.88	-1.3
3,707,472	+		DZA65_RS17165	0.88	-1.8
3,707,472	+		DZA65_RS17165	0.88	-0.4
3,707,472	+		DZA65_RS17165	0.88	-1.3
3,707,472	+		DZA65_RS17165	0.88	-2.8
3,707,473	-		DZA65_RS17165	0.88	-4.1
3,707,473	-		DZA65_RS17165	0.88	-2.3
3,707,473	-		DZA65_RS17165	0.88	-2.4
3,707,473	-		DZA65_RS17165	0.88	-4.9
3,707,473	-		DZA65_RS17165	0.88	+0.7
3,707,473	-		DZA65_RS17165	0.88	-1.1
3,707,473	-		DZA65_RS17165	0.88	-1.9
3,707,587	+				+1.9
3,707,588	-				-1.8
3,707,635	+				-1.1
3,707,729	+		DZA65_RS17170	0.19	+0.4
3,707,729	+		DZA65_RS17170	0.19	+0.2
3,707,729	+		DZA65_RS17170	0.19	-0.1
3,707,730	-		DZA65_RS17170	0.19	-0.1
3,707,730	-		DZA65_RS17170	0.19	+0.6
3,707,730	-		DZA65_RS17170	0.19	+0.1
3,707,730	-		DZA65_RS17170	0.19	-0.6
3,707,730	-		DZA65_RS17170	0.19	-0.0
3,707,730	-		DZA65_RS17170	0.19	-0.2
3,707,730	-		DZA65_RS17170	0.19	-0.5
3,707,730	-		DZA65_RS17170	0.19	-0.9
3,707,730	-		DZA65_RS17170	0.19	+2.3
3,707,731	+		DZA65_RS17170	0.19	+0.2
3,707,731	+		DZA65_RS17170	0.19	+0.8
3,707,731	+		DZA65_RS17170	0.19	-1.1
3,707,731	+		DZA65_RS17170	0.19	-0.8
3,707,732	-		DZA65_RS17170	0.19	-1.2
3,707,732	-		DZA65_RS17170	0.19	+0.8
3,707,732	-		DZA65_RS17170	0.19	+0.3
3,707,732	-		DZA65_RS17170	0.19	+1.1
3,707,732	-				+1.1
3,707,732	-		DZA65_RS17170	0.19	+1.5
3,707,775	+		DZA65_RS17170	0.25	-0.9
3,707,791	+		DZA65_RS17170	0.27	+0.4
3,707,791	+		DZA65_RS17170	0.27	-3.3
3,707,792	-		DZA65_RS17170	0.27	+0.5
3,707,792	-		DZA65_RS17170	0.27	-0.9
3,707,792	-		DZA65_RS17170	0.27	+0.3
3,707,792	-		DZA65_RS17170	0.27	-1.4
3,707,809	+		DZA65_RS17170	0.29	+1.2
3,707,809	+		DZA65_RS17170	0.29	+0.2
3,707,810	-		DZA65_RS17170	0.29	-0.9
3,707,810	-				+3.1
3,707,949	+		DZA65_RS17170	0.47	-0.3
3,707,949	+		DZA65_RS17170	0.47	-0.5
3,707,949	+		DZA65_RS17170	0.47	-2.8
3,707,949	+		DZA65_RS17170	0.47	-1.3
3,707,949	+		DZA65_RS17170	0.47	-1.3
3,707,949	+		DZA65_RS17170	0.47	+0.5
3,707,949	+		DZA65_RS17170	0.47	+0.2
3,707,949	+		DZA65_RS17170	0.47	-0.9
3,707,949	+		DZA65_RS17170	0.47	-1.8
3,707,949	+		DZA65_RS17170	0.47	-2.8
3,707,949	+		DZA65_RS17170	0.47	+0.6
3,707,949	+		DZA65_RS17170	0.47	-1.5
3,707,949	+		DZA65_RS17170	0.47	-0.5
3,707,949	+		DZA65_RS17170	0.47	+2.2
3,707,950	-		DZA65_RS17170	0.47	+0.5
3,707,950	-		DZA65_RS17170	0.47	-1.0
3,707,950	-		DZA65_RS17170	0.47	-0.1
3,707,950	-		DZA65_RS17170	0.47	+0.2
3,707,950	-		DZA65_RS17170	0.47	-0.4
3,707,950	-		DZA65_RS17170	0.47	+0.7
3,707,950	-		DZA65_RS17170	0.47	+1.5
3,708,031	+		DZA65_RS17170	0.58	-0.0
3,708,032	-		DZA65_RS17170	0.58	-0.4
3,708,044	+		DZA65_RS17170	0.59	-0.1
3,708,044	+		DZA65_RS17170	0.59	-1.5
3,708,044	+		DZA65_RS17170	0.59	+0.3
3,708,045	-		DZA65_RS17170	0.60	-1.3