Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS15880

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
3,447,667	-		DZA65_RS15875	0.34	-0.4
3,447,696	+		DZA65_RS15875	0.37	-0.5
3,447,696	+		DZA65_RS15875	0.37	+1.6
3,447,696	+		DZA65_RS15875	0.37	+1.7
3,447,696	+		DZA65_RS15875	0.37	+0.8
3,447,697	-		DZA65_RS15875	0.37	+0.3
3,447,697	-		DZA65_RS15875	0.37	+0.1
3,447,697	-		DZA65_RS15875	0.37	+0.7
3,447,697	-		DZA65_RS15875	0.37	-0.3
3,447,697	-		DZA65_RS15875	0.37	+0.6
3,447,697	-		DZA65_RS15875	0.37	-0.2
3,447,697	-		DZA65_RS15875	0.37	-1.0
3,447,697	-		DZA65_RS15875	0.37	-2.0
3,447,697	-		DZA65_RS15875	0.37	+0.4
3,447,715	+		DZA65_RS15875	0.39	-0.4
3,447,715	+		DZA65_RS15875	0.39	+0.1
3,447,715	+		DZA65_RS15875	0.39	-1.9
3,447,715	+		DZA65_RS15875	0.39	+1.1
3,447,715	+		DZA65_RS15875	0.39	-1.2
3,447,716	-		DZA65_RS15875	0.40	-1.6
3,447,716	-		DZA65_RS15875	0.40	+0.7
3,447,716	-		DZA65_RS15875	0.40	-0.0
3,447,716	-		DZA65_RS15875	0.40	-0.0
3,447,716	-		DZA65_RS15875	0.40	+1.0
3,447,716	-		DZA65_RS15875	0.40	-0.6
3,447,717	+		DZA65_RS15875	0.40	-0.4
3,447,717	+		DZA65_RS15875	0.40	-0.3
3,447,717	+		DZA65_RS15875	0.40	-0.9
3,447,718	-		DZA65_RS15875	0.40	-2.6
3,447,718	-		DZA65_RS15875	0.40	-0.2
3,447,787	+		DZA65_RS15875	0.48	-0.0
3,447,814	+		DZA65_RS15875	0.51	+0.6
3,447,815	-		DZA65_RS15875	0.51	+0.8
3,447,815	-		DZA65_RS15875	0.51	-1.0
3,447,827	-		DZA65_RS15875	0.52	-0.2
3,447,866	-		DZA65_RS15875	0.57	-0.4
3,447,868	+		DZA65_RS15875	0.57	+1.7
3,447,868	+		DZA65_RS15875	0.57	+0.5
3,447,868	+		DZA65_RS15875	0.57	-0.3
3,447,869	-		DZA65_RS15875	0.57	-1.6
3,447,869	-		DZA65_RS15875	0.57	+0.3
3,447,869	-		DZA65_RS15875	0.57	-0.5
3,447,869	-		DZA65_RS15875	0.57	-0.6
3,447,891	+		DZA65_RS15875	0.60	-0.4
3,447,891	+		DZA65_RS15875	0.60	+0.4
3,447,892	-		DZA65_RS15875	0.60	+1.4
3,447,892	-		DZA65_RS15875	0.60	-0.0
3,447,892	-		DZA65_RS15875	0.60	+1.2
3,447,919	+		DZA65_RS15875	0.63	-0.0
3,447,920	-		DZA65_RS15875	0.63	+0.5
3,447,920	-		DZA65_RS15875	0.63	+0.2
3,447,932	-		DZA65_RS15875	0.65	-0.5
3,447,975	-		DZA65_RS15875	0.70	-0.2
3,448,004	+		DZA65_RS15875	0.73	-0.7
3,448,004	+		DZA65_RS15875	0.73	-0.3
3,448,110	+		DZA65_RS15875	0.85	+1.0
3,448,110	+		DZA65_RS15875	0.85	+0.5
3,448,110	+		DZA65_RS15875	0.85	-1.4
3,448,129	+		DZA65_RS15875	0.88	-1.0
3,448,196	+				+0.8
3,448,196	+				-0.1
3,448,196	+				-0.2
3,448,196	+				+0.2
3,448,196	+				-1.0
3,448,196	+				-0.4
3,448,197	-				-0.3
3,448,197	-				+0.4
3,448,197	-				-0.1
3,448,197	-				+0.6
3,448,197	-				-0.3
3,448,197	-				-0.3
3,448,197	-				-0.0
3,448,252	+				-0.3
3,448,268	+				-2.0
3,448,274	+				-0.7
3,448,275	-				-0.5
3,448,287	-				-0.3
3,448,290	+				+0.7
3,448,311	+				+0.4
3,448,312	-				+0.1
3,448,316	+				-0.4
3,448,316	+				-0.0
3,448,317	-				+2.2
3,448,328	+				-0.5
3,448,328	+				-1.6
3,448,328	+				+1.0
3,448,328	+				-0.4
3,448,328	+				-0.4
3,448,328	+				-0.4
3,448,328	+				-0.3
3,448,328	+				+0.7
3,448,328	+				-1.6
3,448,329	-				+0.2
3,448,329	-				-0.6
3,448,329	-				-1.3
3,448,445	+				-0.4
3,448,445	+				-0.0
3,448,465	+				+1.0
3,448,465	+				+1.2
3,448,465	+				+0.8
3,448,465	+				+0.2
3,448,465	+				-0.4
3,448,465	+				-0.3
3,448,465	+				+0.1
3,448,465	+				-0.3
3,448,465	+				+0.5
3,448,465	+				+0.4
3,448,465	+				-0.9
3,448,465	+				-1.0
3,448,466	-				-0.9
3,448,466	-				-1.6
3,448,466	-				+0.8
3,448,466	-				+0.0
3,448,466	-				-1.0
3,448,466	-				-2.0
3,448,466	-				-0.6
3,448,466	-				+0.1
3,448,466	-				+0.9
3,448,466	-				-0.9
3,448,466	-				+0.3
3,448,466	-				-2.4
3,448,466	-				-0.2
3,448,610	+		DZA65_RS15880	0.25	-1.0
3,448,610	+		DZA65_RS15880	0.25	-0.2
3,448,610	+		DZA65_RS15880	0.25	+0.1
3,448,611	-		DZA65_RS15880	0.25	+0.1
3,448,614	+		DZA65_RS15880	0.25	-1.0
3,448,614	+		DZA65_RS15880	0.25	-0.8
3,448,614	+		DZA65_RS15880	0.25	+0.2
3,448,615	-		DZA65_RS15880	0.26	-1.4
3,448,615	-		DZA65_RS15880	0.26	-0.4
3,448,615	-		DZA65_RS15880	0.26	-1.0
3,448,615	-		DZA65_RS15880	0.26	-0.7
3,448,615	-		DZA65_RS15880	0.26	+1.7
3,448,619	+		DZA65_RS15880	0.26	+0.3
3,448,619	+		DZA65_RS15880	0.26	-1.5
3,448,619	+		DZA65_RS15880	0.26	-0.0
3,448,619	+		DZA65_RS15880	0.26	-1.0
3,448,620	-		DZA65_RS15880	0.26	-0.5
3,448,620	-		DZA65_RS15880	0.26	+1.0
3,448,652	-		DZA65_RS15880	0.32	-0.4
3,448,702	+		DZA65_RS15880	0.41	-0.0
3,448,703	-		DZA65_RS15880	0.42	-0.4
3,448,703	-		DZA65_RS15880	0.42	-0.2
3,448,854	-		DZA65_RS15880	0.69	-2.2
3,448,854	-		DZA65_RS15880	0.69	-0.6
3,448,854	-		DZA65_RS15880	0.69	-1.9
3,449,011	+				+0.6
3,449,012	-				+0.4
3,449,012	-				-0.4
3,449,012	-				-1.4
3,449,012	-				-1.0
3,449,012	-				-1.0
3,449,015	+				-0.0
3,449,015	+				-1.2
3,449,015	+				+0.7
3,449,015	+				-0.1
3,449,015	+				+1.5
3,449,015	+				-0.6
3,449,015	+				-1.0
3,449,015	+				+0.4
3,449,015	+				-0.6
3,449,015	+				+0.4
3,449,015	+				+0.7
3,449,015	+				-0.2
3,449,015	+				-0.8
3,449,015	+				-1.0
3,449,015	+				-1.0
3,449,015	+				-1.9
3,449,015	+				-0.0
3,449,015	+				-1.6
3,449,015	+				-0.1
3,449,015	+				+0.3
3,449,016	-				-1.1
3,449,016	-				+2.8
3,449,016	-				-0.6
3,449,016	-				+0.8
3,449,016	-				+0.4
3,449,016	-				+0.1
3,449,016	-				+1.1
3,449,016	-				-0.3
3,449,016	-				-3.2
3,449,016	-				-1.0
3,449,016	-				-0.0
3,449,016	-				+1.3
3,449,016	-				+0.4
3,449,016	-				-1.0
3,449,016	-				-1.6
3,449,016	-				+0.3
3,449,016	-				+0.2
3,449,016	-				-2.9
3,449,016	-				+0.8
3,449,058	+				-0.7
3,449,176	+		DZA65_RS15885	0.11	-1.2
3,449,176	+		DZA65_RS15885	0.11	+0.8
3,449,176	+		DZA65_RS15885	0.11	-0.5
3,449,176	+		DZA65_RS15885	0.11	-0.3
3,449,201	-		DZA65_RS15885	0.13	-0.5
3,449,307	-		DZA65_RS15885	0.21	-0.5
3,449,307	-		DZA65_RS15885	0.21	-1.4
3,449,381	+		DZA65_RS15885	0.26	+0.6
3,449,697	+				-0.0
3,449,697	+		DZA65_RS15885	0.49	+0.5
3,449,697	+		DZA65_RS15885	0.49	-1.2
3,449,697	+		DZA65_RS15885	0.49	-1.4
3,449,698	-		DZA65_RS15885	0.49	+1.8
3,449,843	+		DZA65_RS15885	0.60	-1.0
3,449,843	+		DZA65_RS15885	0.60	+0.3
3,449,843	+		DZA65_RS15885	0.60	-0.4
3,449,843	+		DZA65_RS15885	0.60	+0.6
3,449,844	-		DZA65_RS15885	0.60	-2.4
3,449,844	-		DZA65_RS15885	0.60	+1.1
3,449,844	-		DZA65_RS15885	0.60	+0.0
3,449,844	-		DZA65_RS15885	0.60	-2.0
3,449,851	+		DZA65_RS15885	0.61	-1.5
3,449,851	+		DZA65_RS15885	0.61	-1.4
3,449,851	+		DZA65_RS15885	0.61	-1.0
3,449,852	-		DZA65_RS15885	0.61	-0.8
3,449,852	-		DZA65_RS15885	0.61	-2.0
3,449,852	-		DZA65_RS15885	0.61	+1.2
3,449,852	-		DZA65_RS15885	0.61	-1.0
3,449,852	-		DZA65_RS15885	0.61	+0.5
3,449,852	-		DZA65_RS15885	0.61	-2.2
3,449,852	-		DZA65_RS15885	0.61	+1.0
3,449,852	-		DZA65_RS15885	0.61	+0.2
3,449,852	-		DZA65_RS15885	0.61	+1.3
3,449,852	-		DZA65_RS15885	0.61	-0.1
3,449,862	+		DZA65_RS15885	0.61	+0.1
3,449,862	+		DZA65_RS15885	0.61	+0.4
3,449,862	+		DZA65_RS15885	0.61	+0.2
3,449,909	+		DZA65_RS15885	0.65	+0.7
3,449,909	+		DZA65_RS15885	0.65	+0.1
3,449,910	-		DZA65_RS15885	0.65	+1.2
3,449,910	-		DZA65_RS15885	0.65	+0.5
3,449,910	-		DZA65_RS15885	0.65	+0.4
3,449,910	-		DZA65_RS15885	0.65	-0.1
3,449,920	+		DZA65_RS15885	0.66	-1.5
3,450,003	+		DZA65_RS15885	0.72	+0.8
3,450,003	+		DZA65_RS15885	0.72	+1.6