Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS14685

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
3,191,861	+				-0.1
3,191,861	+				+0.5
3,191,862	-				-0.8
3,191,862	-				-0.9
3,191,862	-				-0.8
3,191,862	-				-1.3
3,191,882	+				+0.8
3,191,882	+				+0.3
3,191,930	+				+1.1
3,191,930	+				-1.5
3,191,931	-				+0.7
3,191,931	-				-1.2
3,191,931	-				+0.2
3,191,931	-				+2.4
3,191,934	+				+0.8
3,191,934	+				+1.2
3,191,935	-				-0.4
3,191,935	-				+0.2
3,191,935	-				+1.4
3,191,994	+				+0.1
3,191,995	-				-1.0
3,191,998	+				+1.9
3,191,999	-				-0.3
3,192,221	+				+1.3
3,192,253	+		DZA65_RS14680	0.10	+0.1
3,192,253	+		DZA65_RS14680	0.10	-0.3
3,192,253	+		DZA65_RS14680	0.10	+0.8
3,192,253	+		DZA65_RS14680	0.10	+0.8
3,192,254	-		DZA65_RS14680	0.10	-1.0
3,192,254	-		DZA65_RS14680	0.10	+0.4
3,192,254	-		DZA65_RS14680	0.10	-0.8
3,192,254	-		DZA65_RS14680	0.10	-1.9
3,192,254	-		DZA65_RS14680	0.10	-0.5
3,192,254	-		DZA65_RS14680	0.10	+1.4
3,192,345	+				+0.8
3,192,346	-		DZA65_RS14680	0.33	-1.0
3,192,346	-		DZA65_RS14680	0.33	-0.8
3,192,346	-		DZA65_RS14680	0.33	+0.2
3,192,346	-		DZA65_RS14680	0.33	-0.6
3,192,599	+				-0.5
3,192,599	+				-1.0
3,192,600	-				-1.1
3,192,600	-				-0.2
3,192,603	+				+0.5
3,192,603	+				+0.1
3,192,603	+				-1.2
3,192,603	+				+1.0
3,192,603	+				+0.3
3,192,604	-				+0.3
3,192,604	-				-0.5
3,192,604	-				-2.1
3,192,625	+				-0.8
3,192,626	-				-2.0
3,192,637	+				+0.2
3,192,637	+				+0.8
3,192,637	+				+0.8
3,192,637	+				-1.2
3,192,637	+				-0.0
3,192,638	-				+0.1
3,192,638	-				-0.3
3,192,638	-				-2.3
3,192,638	-				-0.8
3,192,638	-				+0.2
3,192,638	-				+0.8
3,192,638	-				-1.5
3,192,650	+				+1.4
3,192,650	+				+0.4
3,192,650	+				+0.8
3,192,650	+				-2.9
3,192,650	+				+0.1
3,192,650	+				+0.6
3,192,650	+				+1.8
3,192,651	-				+0.6
3,192,651	-				-0.6
3,192,651	-				+0.3
3,192,651	-				-0.2
3,192,651	-				+0.5
3,192,651	-				+1.1
3,192,651	-				+0.1
3,192,651	-				-0.2
3,192,651	-				-0.6
3,192,651	-				-0.3
3,192,651	-				-1.2
3,192,651	-				+0.4
3,192,651	-				-2.0
3,192,652	+				-0.2
3,192,661	+				+0.1
3,192,662	-				+0.6
3,192,696	-				+0.1
3,192,696	-				-0.3
3,192,704	+				-1.8
3,192,705	-				-0.2
3,192,705	-				-0.2
3,192,706	+				-0.1
3,192,706	+				-0.3
3,192,706	+				+1.0
3,192,707	-				-0.4
3,192,707	-				+0.5
3,192,707	-				+0.1
3,192,707	-				-0.3
3,192,707	-				+0.5
3,192,707	-				-0.3
3,192,707	-				+0.1
3,192,708	+				+0.2
3,192,708	+				-0.3
3,192,708	+				-0.8
3,192,708	+				+0.1
3,192,708	+				-0.2
3,192,708	+				+0.1
3,192,709	-				+0.5
3,192,709	-				-1.0
3,192,709	-				+0.3
3,192,784	+				-0.6
3,192,784	+				-0.2
3,192,785	-				-1.1
3,192,997	+		DZA65_RS14685	0.31	-1.6
3,192,999	+				+0.4
3,192,999	+		DZA65_RS14685	0.31	-0.9
3,192,999	+		DZA65_RS14685	0.31	-0.6
3,192,999	+		DZA65_RS14685	0.31	-1.0
3,192,999	+		DZA65_RS14685	0.31	-0.6
3,192,999	+		DZA65_RS14685	0.31	-2.6
3,192,999	+		DZA65_RS14685	0.31	-0.5
3,192,999	+		DZA65_RS14685	0.31	-2.0
3,192,999	+		DZA65_RS14685	0.31	+0.8
3,192,999	+		DZA65_RS14685	0.31	-0.3
3,193,000	-		DZA65_RS14685	0.31	-0.6
3,193,000	-		DZA65_RS14685	0.31	+0.2
3,193,000	-		DZA65_RS14685	0.31	-1.6
3,193,000	-		DZA65_RS14685	0.31	-0.1
3,193,000	-		DZA65_RS14685	0.31	+0.1
3,193,000	-		DZA65_RS14685	0.31	+1.1
3,193,000	-		DZA65_RS14685	0.31	-1.2
3,193,000	-		DZA65_RS14685	0.31	+1.6
3,193,003	+		DZA65_RS14685	0.32	-0.8
3,193,003	+		DZA65_RS14685	0.32	-2.5
3,193,003	+		DZA65_RS14685	0.32	+0.0
3,193,004	-		DZA65_RS14685	0.32	-1.0
3,193,004	-		DZA65_RS14685	0.32	-1.2
3,193,029	+		DZA65_RS14685	0.35	-0.3
3,193,029	+		DZA65_RS14685	0.35	+0.8
3,193,029	+		DZA65_RS14685	0.35	+0.2
3,193,029	+		DZA65_RS14685	0.35	+0.6
3,193,029	+		DZA65_RS14685	0.35	-1.3
3,193,029	+		DZA65_RS14685	0.35	-1.9
3,193,029	+		DZA65_RS14685	0.35	-1.5
3,193,029	+		DZA65_RS14685	0.35	+1.8
3,193,029	+		DZA65_RS14685	0.35	-0.5
3,193,030	-		DZA65_RS14685	0.35	-0.2
3,193,030	-		DZA65_RS14685	0.35	+1.7
3,193,030	-		DZA65_RS14685	0.35	-0.7
3,193,030	-		DZA65_RS14685	0.35	-1.3
3,193,030	-		DZA65_RS14685	0.35	-0.1
3,193,030	-		DZA65_RS14685	0.35	+1.6
3,193,030	-		DZA65_RS14685	0.35	+0.2
3,193,030	-		DZA65_RS14685	0.35	+0.2
3,193,030	-		DZA65_RS14685	0.35	+1.7
3,193,030	-		DZA65_RS14685	0.35	-1.0
3,193,030	-		DZA65_RS14685	0.35	+0.2
3,193,033	+		DZA65_RS14685	0.36	+0.3
3,193,033	+		DZA65_RS14685	0.36	-1.4
3,193,033	+		DZA65_RS14685	0.36	-0.9
3,193,033	+		DZA65_RS14685	0.36	-0.4
3,193,033	+		DZA65_RS14685	0.36	-0.2
3,193,033	+		DZA65_RS14685	0.36	-1.5
3,193,033	+		DZA65_RS14685	0.36	-1.4
3,193,033	+		DZA65_RS14685	0.36	-2.2
3,193,034	-		DZA65_RS14685	0.36	-0.6
3,193,034	-		DZA65_RS14685	0.36	-1.3
3,193,034	-		DZA65_RS14685	0.36	-0.7
3,193,034	-		DZA65_RS14685	0.36	+1.1
3,193,034	-		DZA65_RS14685	0.36	-0.3
3,193,034	-		DZA65_RS14685	0.36	+0.0
3,193,034	-		DZA65_RS14685	0.36	-1.6
3,193,034	-		DZA65_RS14685	0.36	+0.5
3,193,034	-		DZA65_RS14685	0.36	-0.1
3,193,034	-		DZA65_RS14685	0.36	-0.2
3,193,111	+		DZA65_RS14685	0.47	+0.2
3,193,111	+		DZA65_RS14685	0.47	+1.0
3,193,111	+		DZA65_RS14685	0.47	+0.8
3,193,112	-		DZA65_RS14685	0.47	-0.2
3,193,112	-		DZA65_RS14685	0.47	+0.6
3,193,112	-		DZA65_RS14685	0.47	-2.9
3,193,112	-		DZA65_RS14685	0.47	+0.9
3,193,112	-		DZA65_RS14685	0.47	+2.5
3,193,114	+		DZA65_RS14685	0.47	+0.5
3,193,114	+		DZA65_RS14685	0.47	+0.1
3,193,115	-		DZA65_RS14685	0.47	+0.3
3,193,115	-		DZA65_RS14685	0.47	-1.1
3,193,115	-		DZA65_RS14685	0.47	-1.4
3,193,226	-		DZA65_RS14685	0.62	-0.0
3,193,297	+		DZA65_RS14685	0.72	-1.4
3,193,300	+		DZA65_RS14685	0.73	-1.8
3,193,301	-		DZA65_RS14685	0.73	+1.6
3,193,301	-		DZA65_RS14685	0.73	-0.5
3,193,301	-		DZA65_RS14685	0.73	-0.1
3,193,301	-		DZA65_RS14685	0.73	+1.1
3,193,301	-		DZA65_RS14685	0.73	-1.5
3,193,301	-		DZA65_RS14685	0.73	+1.4
3,193,303	+		DZA65_RS14685	0.73	-0.1
3,193,303	+		DZA65_RS14685	0.73	-0.3
3,193,304	-		DZA65_RS14685	0.73	+0.3
3,193,304	-		DZA65_RS14685	0.73	-0.2
3,193,304	-		DZA65_RS14685	0.73	-0.3
3,193,321	+		DZA65_RS14685	0.75	-1.0
3,193,352	+		DZA65_RS14685	0.80	-0.8
3,193,352	+		DZA65_RS14685	0.80	-0.0
3,193,399	+		DZA65_RS14685	0.86	+0.2
3,193,399	+		DZA65_RS14685	0.86	-1.2
3,193,399	+		DZA65_RS14685	0.86	-1.4
3,193,400	-		DZA65_RS14685	0.86	-0.6
3,193,430	+				-1.2
3,193,430	+				-0.5
3,193,430	+				+0.3
3,193,430	+				-0.6
3,193,431	-				-1.5
3,193,431	-				+0.8
3,193,431	-				+0.5
3,193,431	-				+0.5
3,193,431	-				-0.2
3,193,431	-				+0.0
3,193,431	-				-0.2
3,193,431	-				-0.4
3,193,527	+				-0.5
3,193,527	+				-2.0
3,193,527	+				-1.1
3,193,528	-				+0.5
3,193,528	-				+0.5
3,193,528	-				+0.2
3,193,528	-				-0.2
3,193,528	-				-0.2
3,193,538	+				-1.7
3,193,616	+				-1.5
3,193,616	+				+1.0
3,193,616	+				+2.2
3,193,616	+				+1.2
3,193,616	+				-2.2
3,193,616	+				-2.1
3,193,616	+				-1.3
3,193,616	+				+0.4
3,193,617	-				+0.8
3,193,617	-				-1.0
3,193,617	-				-2.2
3,193,617	-				+0.5
3,193,617	-				-0.2
3,193,617	-				-1.3
3,193,617	-				+0.2
3,193,617	-				-1.1
3,193,732	+		DZA65_RS14690	0.14	-0.0
3,193,732	+		DZA65_RS14690	0.14	-0.1
3,193,733	-		DZA65_RS14690	0.15	-1.3
3,193,733	-		DZA65_RS14690	0.15	+1.1
3,193,742	+		DZA65_RS14690	0.16	-1.4
3,193,742	+		DZA65_RS14690	0.16	+1.0
3,193,742	+		DZA65_RS14690	0.16	+0.2
3,193,742	+		DZA65_RS14690	0.16	-2.5
3,193,742	+		DZA65_RS14690	0.16	-0.6
3,193,743	-		DZA65_RS14690	0.16	+0.2
3,193,743	-		DZA65_RS14690	0.16	+0.7
3,193,743	-		DZA65_RS14690	0.16	-0.4
3,193,743	-		DZA65_RS14690	0.16	-2.3
3,193,743	-		DZA65_RS14690	0.16	+0.7
3,193,743	-		DZA65_RS14690	0.16	+0.7
3,193,743	-		DZA65_RS14690	0.16	-1.1
3,193,743	-		DZA65_RS14690	0.16	+0.1
3,193,743	-		DZA65_RS14690	0.16	-0.8
3,193,743	-		DZA65_RS14690	0.16	-0.0
3,193,743	-		DZA65_RS14690	0.16	+0.6
3,193,746	+		DZA65_RS14690	0.17	+0.6
3,193,746	+		DZA65_RS14690	0.17	+0.6
3,193,746	+		DZA65_RS14690	0.17	+0.8
3,193,746	+		DZA65_RS14690	0.17	+0.1
3,193,746	+		DZA65_RS14690	0.17	+0.3
3,193,747	-		DZA65_RS14690	0.17	+0.8
3,193,747	-		DZA65_RS14690	0.17	+0.1
3,193,747	-		DZA65_RS14690	0.17	+1.6
3,193,747	-		DZA65_RS14690	0.17	+0.5
3,193,747	-		DZA65_RS14690	0.17	+0.5
3,193,747	-		DZA65_RS14690	0.17	-2.2
3,193,747	-		DZA65_RS14690	0.17	+0.2
3,193,748	+		DZA65_RS14690	0.17	+0.8
3,193,748	+		DZA65_RS14690	0.17	+1.8
3,193,749	-		DZA65_RS14690	0.17	+0.4
3,193,775	+		DZA65_RS14690	0.22	-0.0
3,193,793	-		DZA65_RS14690	0.25	+0.3
3,193,793	-		DZA65_RS14690	0.25	-1.2
3,193,793	-		DZA65_RS14690	0.25	+0.8
3,193,866	+		DZA65_RS14690	0.38	+0.3
3,193,866	+		DZA65_RS14690	0.38	+0.5
3,193,866	+		DZA65_RS14690	0.38	-0.0
3,193,866	+		DZA65_RS14690	0.38	+0.5
3,193,867	-		DZA65_RS14690	0.39	+0.3
3,193,867	-		DZA65_RS14690	0.39	+0.2
3,193,900	+		DZA65_RS14690	0.44	+0.6
3,193,900	+		DZA65_RS14690	0.44	+1.2
3,193,900	+				-1.5
3,193,900	+		DZA65_RS14690	0.44	-0.8
3,193,900	+		DZA65_RS14690	0.44	+0.4
3,193,901	-		DZA65_RS14690	0.45	-0.3
3,193,901	-		DZA65_RS14690	0.45	-1.5
3,193,901	-		DZA65_RS14690	0.45	-0.0
3,193,901	-		DZA65_RS14690	0.45	-0.5
3,193,901	-		DZA65_RS14690	0.45	+0.7
3,193,903	+		DZA65_RS14690	0.45	-0.5
3,193,903	+		DZA65_RS14690	0.45	-0.6
3,193,903	+		DZA65_RS14690	0.45	+0.4
3,193,903	+		DZA65_RS14690	0.45	-0.2
3,193,903	+		DZA65_RS14690	0.45	-0.1
3,193,904	-		DZA65_RS14690	0.45	-1.8
3,193,907	+		DZA65_RS14690	0.46	-0.1
3,193,907	+		DZA65_RS14690	0.46	-0.4
3,193,908	-		DZA65_RS14690	0.46	+0.6
3,193,992	+		DZA65_RS14690	0.61	+0.5
3,193,993	-		DZA65_RS14690	0.61	-1.5
3,193,993	-		DZA65_RS14690	0.61	+0.7
3,193,993	-		DZA65_RS14690	0.61	-1.0
3,193,993	-		DZA65_RS14690	0.61	-1.8
3,194,037	-		DZA65_RS14690	0.69	-2.0
3,194,237	+				+0.2
3,194,238	-				+2.4
3,194,269	+				-0.2
3,194,269	+				+0.8
3,194,269	+				-0.7
3,194,269	+				+0.7
3,194,269	+				+1.0
3,194,270	-				+1.4
3,194,270	-				-1.3
3,194,272	+				-1.5
3,194,272	+				+0.6
3,194,272	+				-0.5
3,194,273	-				-0.3
3,194,273	-				+0.4
3,194,298	+				+0.1
3,194,298	+				+0.8
3,194,299	-				-0.5
3,194,299	-				+0.1
3,194,299	-				-2.2
3,194,306	+				-2.3
3,194,306	+				+0.2
3,194,307	-				-0.3
3,194,321	+				-0.8
3,194,321	+				-0.3
3,194,358	+				+0.2
3,194,358	+				-0.2
3,194,359	-				+0.1
3,194,370	+				-1.2
3,194,458	+				+0.3