Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS14250

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
3,111,773	-				+0.5
3,111,817	+				-0.1
3,111,818	-				+0.5
3,111,828	+				-0.6
3,111,828	+				+0.1
3,111,828	+				+0.0
3,111,869	-				-0.4
3,111,933	+				-0.2
3,111,934	-				-0.3
3,111,943	+				-0.4
3,112,009	+				+0.9
3,112,009	+				-1.5
3,112,010	-				+0.7
3,112,010	-				-0.0
3,112,013	+				-0.3
3,112,013	+				-0.8
3,112,013	+				+0.7
3,112,032	+				-1.6
3,112,090	-				-0.7
3,112,114	+				+0.5
3,112,117	-				-0.6
3,112,145	-				-0.4
3,112,145	-				-0.1
3,112,181	-				-0.4
3,112,191	-				-1.0
3,112,349	+				-0.6
3,112,354	-				-1.4
3,112,435	-				-0.1
3,112,435	-				-0.4
3,112,446	+				-0.3
3,112,528	-		DZA65_RS14245	0.32	-0.7
3,112,560	-		DZA65_RS14245	0.45	-0.7
3,112,560	-		DZA65_RS14245	0.45	+0.9
3,112,599	+		DZA65_RS14245	0.60	+0.3
3,112,600	-		DZA65_RS14245	0.61	+0.2
3,112,622	+		DZA65_RS14245	0.69	+1.6
3,112,622	+		DZA65_RS14245	0.69	+0.5
3,112,622	+		DZA65_RS14245	0.69	-1.3
3,112,696	+				+0.1
3,112,696	+				-1.4
3,112,696	+				+1.3
3,112,697	-				-0.1
3,112,727	+				-0.8
3,112,728	-				+1.1
3,112,728	-				-2.1
3,112,759	+				-1.2
3,112,760	-				-1.3
3,112,795	-				+0.1
3,112,849	+				-0.1
3,112,850	-				+0.5
3,112,861	-				-1.3
3,112,910	+		DZA65_RS14250	0.12	+0.2
3,112,910	+		DZA65_RS14250	0.12	+0.2
3,112,911	-		DZA65_RS14250	0.12	-1.6
3,112,911	-		DZA65_RS14250	0.12	-0.4
3,112,911	-		DZA65_RS14250	0.12	+0.3
3,112,911	-		DZA65_RS14250	0.12	-0.1
3,112,911	-		DZA65_RS14250	0.12	-1.7
3,112,911	-		DZA65_RS14250	0.12	+0.3
3,112,916	+		DZA65_RS14250	0.12	-0.7
3,112,916	+		DZA65_RS14250	0.12	-1.1
3,112,916	+		DZA65_RS14250	0.12	-1.3
3,112,917	-		DZA65_RS14250	0.12	-2.1
3,112,917	-		DZA65_RS14250	0.12	+0.2
3,112,917	-				+0.2
3,112,917	-		DZA65_RS14250	0.12	+0.7
3,112,917	-		DZA65_RS14250	0.12	-1.3
3,112,919	-		DZA65_RS14250	0.13	+0.5
3,112,919	-		DZA65_RS14250	0.13	+1.5
3,112,929	+		DZA65_RS14250	0.13	-0.8
3,112,929	+		DZA65_RS14250	0.13	-0.4
3,112,929	+		DZA65_RS14250	0.13	-1.3
3,112,930	-		DZA65_RS14250	0.14	-0.8
3,112,938	+		DZA65_RS14250	0.14	+0.5
3,112,959	+				+0.2
3,112,959	+		DZA65_RS14250	0.16	-1.6
3,113,008	-		DZA65_RS14250	0.20	+0.2
3,113,008	-		DZA65_RS14250	0.20	-1.6
3,113,101	+		DZA65_RS14250	0.27	-0.5
3,113,117	+		DZA65_RS14250	0.28	+1.0
3,113,118	-		DZA65_RS14250	0.28	+0.9
3,113,123	+		DZA65_RS14250	0.29	+0.2
3,113,125	-		DZA65_RS14250	0.29	+0.6
3,113,174	+		DZA65_RS14250	0.33	-0.5
3,113,174	+		DZA65_RS14250	0.33	+0.2
3,113,174	+		DZA65_RS14250	0.33	-0.7
3,113,175	-		DZA65_RS14250	0.33	+1.3
3,113,175	-		DZA65_RS14250	0.33	-0.8
3,113,175	-		DZA65_RS14250	0.33	+0.6
3,113,175	-		DZA65_RS14250	0.33	-2.8
3,113,183	+		DZA65_RS14250	0.34	-1.0
3,113,183	+		DZA65_RS14250	0.34	+2.8
3,113,183	+		DZA65_RS14250	0.34	-0.8
3,113,183	+		DZA65_RS14250	0.34	-0.4
3,113,184	-		DZA65_RS14250	0.34	+0.4
3,113,184	-		DZA65_RS14250	0.34	-0.9
3,113,184	-		DZA65_RS14250	0.34	+1.8
3,113,184	-		DZA65_RS14250	0.34	-0.1
3,113,184	-		DZA65_RS14250	0.34	+1.0
3,113,184	-		DZA65_RS14250	0.34	-1.2
3,113,205	+		DZA65_RS14250	0.35	+0.4
3,113,205	+		DZA65_RS14250	0.35	+0.8
3,113,205	+		DZA65_RS14250	0.35	+0.2
3,113,205	+		DZA65_RS14250	0.35	-1.2
3,113,206	-		DZA65_RS14250	0.35	-0.4
3,113,226	+		DZA65_RS14250	0.37	+2.1
3,113,226	+		DZA65_RS14250	0.37	+0.6
3,113,226	+		DZA65_RS14250	0.37	-0.7
3,113,227	-		DZA65_RS14250	0.37	-1.6
3,113,227	-		DZA65_RS14250	0.37	-0.6
3,113,227	-		DZA65_RS14250	0.37	-0.2
3,113,227	-		DZA65_RS14250	0.37	-0.9
3,113,230	+		DZA65_RS14250	0.37	+0.4
3,113,231	-		DZA65_RS14250	0.37	-0.3
3,113,248	+		DZA65_RS14250	0.39	+0.3
3,113,248	+		DZA65_RS14250	0.39	-0.3
3,113,249	-		DZA65_RS14250	0.39	-1.1
3,113,249	-		DZA65_RS14250	0.39	-0.4
3,113,249	-		DZA65_RS14250	0.39	-0.6
3,113,249	-		DZA65_RS14250	0.39	-0.6
3,113,297	+		DZA65_RS14250	0.43	+0.1
3,113,297	+		DZA65_RS14250	0.43	+0.2
3,113,297	+		DZA65_RS14250	0.43	-1.6
3,113,298	-		DZA65_RS14250	0.43	-1.3
3,113,298	-		DZA65_RS14250	0.43	+1.5
3,113,298	-		DZA65_RS14250	0.43	-0.8
3,113,298	-		DZA65_RS14250	0.43	-0.7
3,113,298	-		DZA65_RS14250	0.43	-0.1
3,113,358	+		DZA65_RS14250	0.48	+0.6
3,113,359	-		DZA65_RS14250	0.48	+1.0
3,113,373	+		DZA65_RS14250	0.49	-0.2
3,113,374	-		DZA65_RS14250	0.49	-0.2
3,113,374	-		DZA65_RS14250	0.49	-0.6
3,113,374	-		DZA65_RS14250	0.49	-1.8
3,113,474	+		DZA65_RS14250	0.57	+0.4
3,113,475	-		DZA65_RS14250	0.57	+0.5
3,113,566	+		DZA65_RS14250	0.64	+0.6
3,113,566	+		DZA65_RS14250	0.64	+0.4
3,113,593	+		DZA65_RS14250	0.66	+0.3
3,113,594	-		DZA65_RS14250	0.66	-0.4
3,113,672	+		DZA65_RS14250	0.73	-2.2
3,113,672	+		DZA65_RS14250	0.73	+0.2
3,113,672	+		DZA65_RS14250	0.73	-1.7
3,113,672	+		DZA65_RS14250	0.73	-0.7
3,113,672	+		DZA65_RS14250	0.73	-0.1
3,113,673	-		DZA65_RS14250	0.73	+0.5
3,113,673	-		DZA65_RS14250	0.73	+0.9
3,113,673	-		DZA65_RS14250	0.73	+0.4
3,113,673	-		DZA65_RS14250	0.73	+0.1
3,113,673	-		DZA65_RS14250	0.73	-0.2
3,113,673	-		DZA65_RS14250	0.73	-0.2
3,113,673	-		DZA65_RS14250	0.73	+1.3
3,113,673	-		DZA65_RS14250	0.73	-0.8
3,113,673	-		DZA65_RS14250	0.73	+0.3
3,113,673	-		DZA65_RS14250	0.73	-0.5
3,113,674	+		DZA65_RS14250	0.73	+0.5
3,113,674	+		DZA65_RS14250	0.73	-0.8
3,113,674	+		DZA65_RS14250	0.73	-1.2
3,113,675	-		DZA65_RS14250	0.73	-0.5
3,113,675	-		DZA65_RS14250	0.73	+0.1
3,113,675	-		DZA65_RS14250	0.73	-0.7
3,113,675	-		DZA65_RS14250	0.73	-3.1
3,113,675	-		DZA65_RS14250	0.73	-1.6
3,113,681	-		DZA65_RS14250	0.73	-0.4
3,113,692	+		DZA65_RS14250	0.74	+0.3
3,113,692	+		DZA65_RS14250	0.74	+0.6
3,113,692	+		DZA65_RS14250	0.74	+0.6
3,113,692	+		DZA65_RS14250	0.74	+0.2
3,113,692	+		DZA65_RS14250	0.74	+0.4
3,113,693	-		DZA65_RS14250	0.74	-0.4
3,113,693	-		DZA65_RS14250	0.74	-0.8
3,113,693	-		DZA65_RS14250	0.74	+1.6
3,113,804	+		DZA65_RS14250	0.83	-0.9
3,113,804	+		DZA65_RS14250	0.83	-0.2
3,113,804	+		DZA65_RS14250	0.83	-1.2
3,113,983	+				-0.2
3,113,983	+				+0.6
3,113,983	+				-0.5
3,113,983	+				-0.5
3,113,983	+				-0.4
3,113,984	-				+1.4
3,113,984	-				+0.6
3,113,984	-				+0.2
3,114,025	+				+0.1
3,114,025	+				-2.7
3,114,026	-				-0.8
3,114,030	+				-0.1
3,114,031	-				+0.3
3,114,036	-				-0.7
3,114,036	-				-1.5
3,114,036	-				-0.3
3,114,096	+				+0.4
3,114,096	+				+0.3
3,114,096	+				-0.2
3,114,097	-				+0.4
3,114,097	-				-0.7
3,114,097	-				-0.8
3,114,097	-				+1.5
3,114,097	-				-0.8
3,114,101	+				-1.2
3,114,101	+				-1.6
3,114,101	+				+0.5
3,114,102	-				-0.4
3,114,133	+				+0.2
3,114,134	-				-0.2
3,114,134	-				+0.3
3,114,134	-				+0.3
3,114,134	-				-0.7
3,114,244	+		DZA65_RS14255	0.16	+0.4
3,114,244	+		DZA65_RS14255	0.16	-0.2
3,114,244	+		DZA65_RS14255	0.16	-0.2
3,114,245	-		DZA65_RS14255	0.16	+0.8
3,114,245	-		DZA65_RS14255	0.16	-0.4
3,114,288	-		DZA65_RS14255	0.19	-1.2
3,114,323	+		DZA65_RS14255	0.22	+0.3
3,114,323	+		DZA65_RS14255	0.22	+0.2
3,114,323	+		DZA65_RS14255	0.22	-2.6
3,114,324	-		DZA65_RS14255	0.22	-0.8
3,114,324	-		DZA65_RS14255	0.22	-0.4
3,114,327	+		DZA65_RS14255	0.22	-0.1
3,114,327	+		DZA65_RS14255	0.22	-0.5
3,114,327	+		DZA65_RS14255	0.22	+0.8
3,114,327	+		DZA65_RS14255	0.22	-0.1
3,114,327	+		DZA65_RS14255	0.22	-1.2
3,114,327	+		DZA65_RS14255	0.22	+0.8
3,114,327	+		DZA65_RS14255	0.22	+0.3
3,114,328	-		DZA65_RS14255	0.22	+0.9
3,114,340	-		DZA65_RS14255	0.23	-0.2
3,114,340	-		DZA65_RS14255	0.23	-0.2
3,114,422	+		DZA65_RS14255	0.30	-0.6
3,114,423	-		DZA65_RS14255	0.30	+1.3
3,114,425	+		DZA65_RS14255	0.30	-0.0
3,114,426	-		DZA65_RS14255	0.30	-1.2
3,114,426	-		DZA65_RS14255	0.30	-0.8
3,114,464	-		DZA65_RS14255	0.33	+0.2
3,114,464	-		DZA65_RS14255	0.33	-0.4
3,114,467	+		DZA65_RS14255	0.33	-0.5
3,114,468	-		DZA65_RS14255	0.33	+0.3
3,114,468	-		DZA65_RS14255	0.33	+0.4
3,114,479	+		DZA65_RS14255	0.34	-1.6
3,114,479	+		DZA65_RS14255	0.34	+0.3
3,114,479	+				+2.3
3,114,480	-		DZA65_RS14255	0.34	-1.6
3,114,480	-		DZA65_RS14255	0.34	+0.0
3,114,480	-		DZA65_RS14255	0.34	+0.3
3,114,518	+		DZA65_RS14255	0.37	+1.4
3,114,519	-		DZA65_RS14255	0.37	-0.6
3,114,519	-		DZA65_RS14255	0.37	-0.0
3,114,607	+		DZA65_RS14255	0.44	-0.8
3,114,607	+		DZA65_RS14255	0.44	+1.8
3,114,608	-		DZA65_RS14255	0.44	-0.4
3,114,608	-		DZA65_RS14255	0.44	+0.8
3,114,613	+		DZA65_RS14255	0.45	+0.8
3,114,613	+		DZA65_RS14255	0.45	+0.2
3,114,613	+		DZA65_RS14255	0.45	-0.5
3,114,613	+		DZA65_RS14255	0.45	-1.1
3,114,613	+		DZA65_RS14255	0.45	-2.1
3,114,613	+		DZA65_RS14255	0.45	-0.8
3,114,613	+		DZA65_RS14255	0.45	+0.3
3,114,613	+		DZA65_RS14255	0.45	-1.1
3,114,613	+		DZA65_RS14255	0.45	-0.7
3,114,613	+		DZA65_RS14255	0.45	-0.6
3,114,613	+		DZA65_RS14255	0.45	+1.4
3,114,614	-		DZA65_RS14255	0.45	+3.1
3,114,614	-		DZA65_RS14255	0.45	-0.8
3,114,614	-		DZA65_RS14255	0.45	-0.2
3,114,614	-		DZA65_RS14255	0.45	-0.8
3,114,614	-		DZA65_RS14255	0.45	-0.5
3,114,614	-		DZA65_RS14255	0.45	-1.1
3,114,614	-		DZA65_RS14255	0.45	-0.1
3,114,614	-		DZA65_RS14255	0.45	+0.5
3,114,614	-		DZA65_RS14255	0.45	+0.6
3,114,614	-		DZA65_RS14255	0.45	+0.0
3,114,614	-		DZA65_RS14255	0.45	+0.0
3,114,614	-		DZA65_RS14255	0.45	-0.4
3,114,627	+		DZA65_RS14255	0.46	-0.5
3,114,631	-		DZA65_RS14255	0.46	+0.8
3,114,650	+		DZA65_RS14255	0.48	+0.3
3,114,650	+		DZA65_RS14255	0.48	+0.3
3,114,650	+		DZA65_RS14255	0.48	-0.6
3,114,650	+		DZA65_RS14255	0.48	-0.7
3,114,650	+		DZA65_RS14255	0.48	+0.6
3,114,650	+		DZA65_RS14255	0.48	-0.4
3,114,650	+		DZA65_RS14255	0.48	-2.1
3,114,651	-		DZA65_RS14255	0.48	-1.8
3,114,651	-		DZA65_RS14255	0.48	-1.2
3,114,651	-		DZA65_RS14255	0.48	+0.0
3,114,651	-		DZA65_RS14255	0.48	+0.2
3,114,651	-		DZA65_RS14255	0.48	-1.4
3,114,651	-		DZA65_RS14255	0.48	-0.2
3,114,700	+		DZA65_RS14255	0.52	+0.7
3,114,768	+		DZA65_RS14255	0.57	+0.6
3,114,768	+		DZA65_RS14255	0.57	-3.3
3,114,768	+		DZA65_RS14255	0.57	+1.1
3,114,768	+		DZA65_RS14255	0.57	-2.6
3,114,768	+		DZA65_RS14255	0.57	+0.8
3,114,768	+		DZA65_RS14255	0.57	-0.5
3,114,768	+		DZA65_RS14255	0.57	+1.5
3,114,768	+		DZA65_RS14255	0.57	-0.7
3,114,768	+		DZA65_RS14255	0.57	+0.5
3,114,769	-		DZA65_RS14255	0.57	-2.2
3,114,769	-		DZA65_RS14255	0.57	-0.5
3,114,769	-		DZA65_RS14255	0.57	-0.1
3,114,769	-		DZA65_RS14255	0.57	+0.4
3,114,787	-		DZA65_RS14255	0.59	-0.5
3,114,787	-		DZA65_RS14255	0.59	+0.8
3,114,801	-		DZA65_RS14255	0.60	-0.1
3,114,801	-		DZA65_RS14255	0.60	+0.8
3,114,836	+		DZA65_RS14255	0.62	+0.8
3,114,836	+		DZA65_RS14255	0.62	+0.3
3,114,848	+		DZA65_RS14255	0.63	-0.8
3,114,849	-		DZA65_RS14255	0.63	-1.9
3,114,876	-		DZA65_RS14255	0.66	-2.2
3,114,918	+		DZA65_RS14255	0.69	-0.9
3,114,919	-		DZA65_RS14255	0.69	-0.4
3,114,919	-		DZA65_RS14255	0.69	+0.4
3,114,919	-		DZA65_RS14255	0.69	+0.6
3,114,919	-		DZA65_RS14255	0.69	-0.4
3,114,919	-		DZA65_RS14255	0.69	-0.6
3,114,919	-		DZA65_RS14255	0.69	+1.8
3,114,935	+		DZA65_RS14255	0.70	-1.7
3,114,938	+		DZA65_RS14255	0.70	-1.1
3,114,938	+		DZA65_RS14255	0.70	-2.1
3,114,938	+		DZA65_RS14255	0.70	-0.5
3,114,938	+		DZA65_RS14255	0.70	+0.4
3,114,939	-		DZA65_RS14255	0.71	+0.5
3,114,939	-		DZA65_RS14255	0.71	-0.8
3,114,939	-		DZA65_RS14255	0.71	-0.1
3,114,939	-		DZA65_RS14255	0.71	-2.6
3,114,939	-		DZA65_RS14255	0.71	+0.0
3,114,939	-		DZA65_RS14255	0.71	-0.7
3,114,939	-		DZA65_RS14255	0.71	+0.6
3,114,939	-		DZA65_RS14255	0.71	+0.8
3,114,955	+		DZA65_RS14255	0.72	+1.6
3,114,956	-		DZA65_RS14255	0.72	-0.7
3,114,956	-		DZA65_RS14255	0.72	+0.8
3,114,956	-		DZA65_RS14255	0.72	+1.0