Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS13770

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
2,954,565	-		DZA65_RS13765	0.48	-1.0
2,954,585	+				+1.0
2,954,585	+		DZA65_RS13765	0.49	-0.3
2,954,585	+		DZA65_RS13765	0.49	+0.3
2,954,585	+		DZA65_RS13765	0.49	+1.3
2,954,586	-		DZA65_RS13765	0.49	-0.5
2,954,695	-		DZA65_RS13765	0.56	-0.5
2,954,725	-		DZA65_RS13765	0.58	+0.7
2,954,725	-		DZA65_RS13765	0.58	+0.7
2,954,738	+		DZA65_RS13765	0.59	+0.3
2,954,738	+		DZA65_RS13765	0.59	-0.9
2,954,738	+		DZA65_RS13765	0.59	-1.3
2,954,738	+		DZA65_RS13765	0.59	-1.1
2,954,738	+		DZA65_RS13765	0.59	+0.3
2,954,738	+		DZA65_RS13765	0.59	-2.6
2,954,738	+		DZA65_RS13765	0.59	-0.1
2,954,738	+		DZA65_RS13765	0.59	-0.1
2,954,739	-		DZA65_RS13765	0.59	+0.7
2,954,739	-		DZA65_RS13765	0.59	-0.5
2,954,739	-		DZA65_RS13765	0.59	+0.7
2,954,739	-		DZA65_RS13765	0.59	-1.8
2,954,739	-		DZA65_RS13765	0.59	-1.1
2,954,834	+		DZA65_RS13765	0.65	-0.0
2,954,835	-		DZA65_RS13765	0.66	+0.7
2,954,835	-		DZA65_RS13765	0.66	-0.7
2,955,000	+		DZA65_RS13765	0.76	+0.9
2,955,001	-		DZA65_RS13765	0.76	+0.7
2,955,065	+		DZA65_RS13765	0.81	-0.0
2,955,081	+		DZA65_RS13765	0.82	+0.6
2,955,081	+		DZA65_RS13765	0.82	-1.1
2,955,081	+				-0.3
2,955,081	+		DZA65_RS13765	0.82	-0.9
2,955,082	-		DZA65_RS13765	0.82	-0.1
2,955,082	-		DZA65_RS13765	0.82	+0.4
2,955,082	-		DZA65_RS13765	0.82	-0.3
2,955,082	-		DZA65_RS13765	0.82	+0.3
2,955,082	-		DZA65_RS13765	0.82	-0.7
2,955,183	+		DZA65_RS13765	0.88	-1.1
2,955,184	-		DZA65_RS13765	0.89	+0.7
2,955,315	-				-0.9
2,955,355	+				-1.0
2,955,355	+				+1.1
2,955,356	-				-0.6
2,955,394	+				+0.6
2,955,394	+				-0.9
2,955,394	+				-1.9
2,955,394	+				+0.2
2,955,395	-				+0.7
2,955,395	-				+1.4
2,955,395	-				+0.6
2,955,395	-				-0.8
2,955,406	+				-1.2
2,955,406	+				-0.9
2,955,406	+				-0.1
2,955,406	+				-1.0
2,955,406	+				+0.6
2,955,406	+				+0.1
2,955,406	+				-0.3
2,955,407	-				+0.0
2,955,407	-				+0.0
2,955,407	-				+0.4
2,955,407	-				+1.0
2,955,407	-				+1.7
2,955,407	-				+1.2
2,955,451	+				+0.3
2,955,451	+				-0.3
2,955,534	+				-0.0
2,955,534	+				+0.2
2,955,535	-				-2.1
2,955,626	+				-0.0
2,955,627	-				-1.6
2,955,738	-		DZA65_RS13770	0.14	+0.3
2,955,761	+		DZA65_RS13770	0.15	+1.1
2,955,761	+		DZA65_RS13770	0.15	-0.6
2,955,816	+		DZA65_RS13770	0.19	+0.4
2,955,816	+				+0.4
2,955,839	+		DZA65_RS13770	0.20	-1.9
2,955,839	+		DZA65_RS13770	0.20	+1.1
2,955,840	-		DZA65_RS13770	0.20	-0.3
2,955,840	-		DZA65_RS13770	0.20	-0.6
2,955,870	-		DZA65_RS13770	0.22	+0.7
2,955,914	+		DZA65_RS13770	0.25	-0.3
2,955,915	-		DZA65_RS13770	0.25	-0.3
2,955,954	-		DZA65_RS13770	0.27	+1.0
2,956,052	+		DZA65_RS13770	0.33	+0.0
2,956,052	+		DZA65_RS13770	0.33	-2.4
2,956,070	+		DZA65_RS13770	0.34	-0.5
2,956,214	+		DZA65_RS13770	0.43	-0.0
2,956,226	+				+0.7
2,956,388	+		DZA65_RS13770	0.53	-0.1
2,956,388	+		DZA65_RS13770	0.53	+2.7
2,956,411	+		DZA65_RS13770	0.54	-0.1
2,956,411	+				-0.3
2,956,566	+		DZA65_RS13770	0.64	-1.3
2,956,566	+		DZA65_RS13770	0.64	-0.5
2,956,567	-		DZA65_RS13770	0.64	+0.0
2,956,607	+		DZA65_RS13770	0.66	-1.2
2,956,608	-		DZA65_RS13770	0.66	-0.1
2,956,609	+		DZA65_RS13770	0.66	-0.5
2,956,609	+		DZA65_RS13770	0.66	-0.9
2,956,609	+		DZA65_RS13770	0.66	+2.1
2,956,610	-		DZA65_RS13770	0.66	+0.4
2,956,610	-				-0.3
2,956,610	-		DZA65_RS13770	0.66	-0.5
2,956,610	-		DZA65_RS13770	0.66	-0.5
2,956,610	-		DZA65_RS13770	0.66	+0.1
2,956,610	-		DZA65_RS13770	0.66	-0.1
2,956,613	+		DZA65_RS13770	0.67	-1.0
2,956,613	+		DZA65_RS13770	0.67	-1.8
2,956,613	+		DZA65_RS13770	0.67	+0.8
2,956,613	+		DZA65_RS13770	0.67	-0.7
2,956,613	+		DZA65_RS13770	0.67	-0.1
2,956,614	-		DZA65_RS13770	0.67	+0.5
2,956,614	-		DZA65_RS13770	0.67	-1.2
2,956,614	-		DZA65_RS13770	0.67	+0.4
2,956,615	+		DZA65_RS13770	0.67	-1.6
2,956,615	+		DZA65_RS13770	0.67	-0.7
2,956,615	+		DZA65_RS13770	0.67	+0.2
2,956,616	-		DZA65_RS13770	0.67	+0.5
2,956,616	-		DZA65_RS13770	0.67	-1.3
2,956,616	-		DZA65_RS13770	0.67	-1.2
2,956,616	-		DZA65_RS13770	0.67	-0.4
2,956,616	-		DZA65_RS13770	0.67	-0.3
2,956,616	-		DZA65_RS13770	0.67	+0.4
2,956,616	-		DZA65_RS13770	0.67	-0.9
2,956,616	-		DZA65_RS13770	0.67	-0.3
2,956,616	-		DZA65_RS13770	0.67	-1.1
2,956,616	-		DZA65_RS13770	0.67	-0.7
2,956,616	-		DZA65_RS13770	0.67	-1.3
2,956,616	-		DZA65_RS13770	0.67	-2.3
2,956,693	+		DZA65_RS13770	0.71	-0.2
2,956,694	-		DZA65_RS13770	0.71	+0.4
2,956,694	-		DZA65_RS13770	0.71	-2.1
2,956,778	+		DZA65_RS13770	0.77	+0.7
2,956,779	-		DZA65_RS13770	0.77	+0.0
2,956,795	+		DZA65_RS13770	0.78	+0.3
2,956,818	-		DZA65_RS13770	0.79	-0.6
2,956,850	+		DZA65_RS13770	0.81	-1.3
2,957,040	-				-0.9
2,957,077	-				-0.8
2,957,106	-				-2.8
2,957,169	+				-1.9
2,957,184	+				+0.3
2,957,240	+				-0.4
2,957,252	+				+0.4
2,957,331	+				+0.3
2,957,332	-				+1.0
2,957,332	-				+0.2
2,957,373	+				-0.0
2,957,373	+				+0.5
2,957,374	-				+0.6
2,957,374	-				-0.3
2,957,374	-				+0.4
2,957,374	-				+0.5
2,957,375	+				-0.2
2,957,375	+				+0.4
2,957,375	+				+0.4
2,957,375	+				-0.9
2,957,375	+				-0.3
2,957,375	+				-0.3
2,957,376	-				+2.0
2,957,376	-				+0.2
2,957,376	-				+0.3
2,957,442	+				+1.4
2,957,443	-				-1.4
2,957,466	-				-1.4
2,957,466	-				+0.3
2,957,477	+				-1.8
2,957,477	+				+0.2
2,957,558	+				-0.7
2,957,619	-				-0.6
2,957,631	+				+2.3
2,957,632	-				+0.0
2,957,664	-				+1.6
2,957,695	+				+0.1
2,957,723	-				+0.2
2,957,772	-				-2.3
2,957,804	+				-1.9
2,957,805	-				-0.6
2,957,814	+				+1.9
2,957,930	+				+0.7
2,957,958	+				-0.7
2,957,959	-				+0.1
2,957,960	+				-1.0
2,957,961	-				-1.3
2,957,968	-				+0.4
2,958,024	-				-0.9
2,958,045	+				+1.1
2,958,045	+				+1.0
2,958,102	-				+0.4
2,958,139	+				+1.1
2,958,139	+				+0.7
2,958,167	+				-0.9