Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS13555

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
2,908,992	+		DZA65_RS13545	0.30	+0.1
2,909,010	+		DZA65_RS13545	0.32	-0.9
2,909,011	-		DZA65_RS13545	0.32	+0.4
2,909,011	-		DZA65_RS13545	0.32	-0.9
2,909,038	+		DZA65_RS13545	0.36	+0.7
2,909,039	-		DZA65_RS13545	0.36	+0.3
2,909,039	-		DZA65_RS13545	0.36	-1.0
2,909,046	+		DZA65_RS13545	0.37	-0.3
2,909,046	+				+0.1
2,909,046	+		DZA65_RS13545	0.37	-0.1
2,909,047	-		DZA65_RS13545	0.37	-1.3
2,909,047	-		DZA65_RS13545	0.37	-0.5
2,909,047	-		DZA65_RS13545	0.37	+0.1
2,909,328	+		DZA65_RS13545	0.71	+1.7
2,909,328	+		DZA65_RS13545	0.71	-0.3
2,909,329	-		DZA65_RS13545	0.71	-0.6
2,909,329	-		DZA65_RS13545	0.71	+0.8
2,909,329	-		DZA65_RS13545	0.71	+0.0
2,909,329	-		DZA65_RS13545	0.71	-0.7
2,909,388	+		DZA65_RS13545	0.78	+0.5
2,909,388	+		DZA65_RS13545	0.78	+0.4
2,909,388	+		DZA65_RS13545	0.78	-0.2
2,909,389	-		DZA65_RS13545	0.79	-0.7
2,909,389	-		DZA65_RS13545	0.79	+0.3
2,909,389	-		DZA65_RS13545	0.79	+0.4
2,909,490	-				+0.9
2,909,535	+				+1.4
2,909,535	+				+0.5
2,909,563	+				-1.4
2,909,563	+				+0.6
2,909,563	+				-0.3
2,909,563	+				-0.2
2,909,563	+				-1.0
2,909,563	+				+1.0
2,909,563	+				+0.3
2,909,563	+				+1.4
2,909,563	+				-1.6
2,909,563	+				-1.0
2,909,564	-				+1.1
2,909,564	-				+1.0
2,909,564	-				-1.1
2,909,564	-				-0.6
2,909,564	-				+0.4
2,909,564	-				-1.9
2,909,564	-				-0.1
2,909,564	-				-0.3
2,909,564	-				-0.5
2,909,564	-				+0.3
2,909,564	-				+0.0
2,909,564	-				-0.6
2,909,564	-				-0.7
2,909,564	-				-0.0
2,909,564	-				+0.9
2,909,564	-				+0.8
2,909,564	-				-0.5
2,909,580	+				-0.2
2,909,580	+				+0.1
2,909,581	-				-0.1
2,909,581	-				+0.9
2,909,584	+				+0.3
2,909,592	+				-0.9
2,909,592	+				+0.9
2,909,592	+				+0.2
2,909,592	+				+1.1
2,909,592	+				-0.3
2,909,593	-				+0.9
2,909,593	-				+0.0
2,909,593	-				-2.6
2,909,593	-				-0.9
2,909,595	-				+0.5
2,909,604	-				+0.1
2,909,604	-				-0.2
2,909,604	-				+0.1
2,909,604	-				-1.3
2,909,656	-				-1.3
2,909,656	-				+0.7
2,909,656	-				-1.5
2,909,656	-				+0.5
2,909,656	-				-1.5
2,909,660	-				+1.5
2,909,660	-				-0.0
2,909,660	-				+0.2
2,909,660	-				+0.1
2,909,660	-				+0.9
2,909,706	+				+1.1
2,909,710	+				+0.0
2,909,715	+				-0.4
2,909,715	+				-1.1
2,909,715	+				-0.3
2,909,715	+				+0.0
2,909,715	+				+0.8
2,909,715	+				+0.5
2,909,715	+				-0.1
2,909,715	+				+0.7
2,909,715	+				-2.1
2,909,717	+				-0.9
2,909,717	+				+0.1
2,909,717	+				+1.0
2,909,717	+				+0.7
2,909,717	+				-1.3
2,909,717	+				-0.4
2,909,717	+				-0.4
2,909,717	+				-0.8
2,909,717	+				-1.8
2,909,717	+				-0.5
2,909,717	+				-0.8
2,909,717	+				-0.5
2,909,717	+				-0.9
2,909,717	+				+0.7
2,909,717	+				+0.7
2,909,717	+				+1.0
2,909,717	+				-1.6
2,909,717	+				+0.7
2,909,719	+				+0.0
2,909,719	+				+1.8
2,909,719	+				-1.3
2,909,719	+				+1.0
2,909,719	+				+0.7
2,909,719	+				+0.1
2,909,719	+				-1.4
2,909,719	+				+2.3
2,909,719	+				+0.2
2,909,719	+				-1.6
2,909,719	+				-0.9
2,909,719	+				+0.7
2,909,719	+				-2.9
2,909,719	+				-1.1
2,909,719	+				-0.3
2,909,719	+				-1.3
2,909,719	+				+0.7
2,909,719	+				-0.9
2,909,719	+				-0.1
2,909,719	+				-0.3
2,909,719	+				-0.3
2,909,719	+				-0.5
2,909,719	+				-0.1
2,909,719	+				-0.9
2,909,719	+				-0.9
2,909,720	-				+0.1
2,909,720	-				+0.3
2,909,720	-				-0.1
2,909,720	-				-0.3
2,909,720	-				-2.1
2,909,720	-				-0.7
2,909,720	-				-0.5
2,909,720	-				-2.1
2,909,720	-				-1.1
2,909,720	-				-1.4
2,909,720	-				-0.9
2,909,720	-				-0.6
2,909,720	-				+1.7
2,909,725	+				+1.0
2,909,725	+				+2.0
2,909,741	+				+0.3
2,909,741	+				+0.4
2,909,741	+				-0.9
2,909,742	-				-0.9
2,909,770	+				-1.1
2,909,771	-				-1.2
2,909,771	-				+1.2
2,909,884	-				-0.9
2,909,884	-				-1.2
2,909,884	-				+2.0
2,909,884	-				-2.3
2,909,908	+				+0.8
2,909,908	+				+0.0
2,909,908	+				+0.5
2,909,908	+				+1.7
2,909,910	+				+2.0
2,909,910	+				+0.9
2,909,910	+				-2.5
2,909,910	+				+0.5
2,909,910	+				+0.5
2,909,911	-				+0.1
2,909,911	-				-0.2
2,909,911	-				-0.1
2,909,911	-				-0.1
2,909,911	-				-2.3
2,909,911	-				+0.3
2,909,911	-				+0.1
2,909,911	-				-0.7
2,909,911	-				+0.2
2,909,911	-				-0.9
2,909,911	-				-2.1
2,909,911	-				-0.6
2,909,911	-				-0.5
2,909,911	-				-0.2
2,909,911	-				-3.0
2,909,916	-				+0.4
2,909,995	+				-1.1
2,909,995	+				-0.1
2,910,001	+				-0.1
2,910,002	-				-0.9
2,910,163	+		DZA65_RS13555	0.13	+0.1
2,910,164	-		DZA65_RS13555	0.13	-0.7
2,910,288	+		DZA65_RS13555	0.18	+1.1
2,910,315	+		DZA65_RS13555	0.19	+0.1
2,910,316	-		DZA65_RS13555	0.19	-0.6
2,910,316	-		DZA65_RS13555	0.19	-0.3
2,910,316	-		DZA65_RS13555	0.19	+0.3
2,910,481	+		DZA65_RS13555	0.26	-0.6
2,910,481	+		DZA65_RS13555	0.26	-0.3
2,910,481	+		DZA65_RS13555	0.26	-0.5
2,910,481	+		DZA65_RS13555	0.26	+0.1
2,910,481	+		DZA65_RS13555	0.26	-0.4
2,910,481	+		DZA65_RS13555	0.26	-1.5
2,910,481	+		DZA65_RS13555	0.26	-1.6
2,910,482	-		DZA65_RS13555	0.26	+0.3
2,910,482	-		DZA65_RS13555	0.26	-1.0
2,910,482	-		DZA65_RS13555	0.26	-0.3
2,910,482	-		DZA65_RS13555	0.26	-1.6
2,910,482	-		DZA65_RS13555	0.26	-0.4
2,910,482	-		DZA65_RS13555	0.26	-0.5
2,910,483	+		DZA65_RS13555	0.26	-0.1
2,910,483	+		DZA65_RS13555	0.26	-0.5
2,910,483	+		DZA65_RS13555	0.26	+0.2
2,910,483	+		DZA65_RS13555	0.26	-0.7
2,910,483	+		DZA65_RS13555	0.26	-0.1
2,910,483	+		DZA65_RS13555	0.26	+0.5
2,910,483	+		DZA65_RS13555	0.26	-0.0
2,910,484	-		DZA65_RS13555	0.26	-0.9
2,910,484	-		DZA65_RS13555	0.26	-1.1
2,910,484	-		DZA65_RS13555	0.26	+0.0
2,910,484	-		DZA65_RS13555	0.26	+0.7
2,910,484	-		DZA65_RS13555	0.26	+0.7
2,910,490	-		DZA65_RS13555	0.26	-0.9
2,910,490	-		DZA65_RS13555	0.26	-0.8
2,910,550	-		DZA65_RS13555	0.29	-1.6
2,910,598	+		DZA65_RS13555	0.31	-1.6
2,910,658	+		DZA65_RS13555	0.34	+0.5
2,910,659	-		DZA65_RS13555	0.34	-2.1
2,910,694	+		DZA65_RS13555	0.35	-1.1
2,910,694	+		DZA65_RS13555	0.35	-0.9
2,910,694	+		DZA65_RS13555	0.35	+0.0
2,910,696	+		DZA65_RS13555	0.35	-1.1
2,910,696	+		DZA65_RS13555	0.35	-0.4
2,910,697	-		DZA65_RS13555	0.35	-0.3
2,910,697	-		DZA65_RS13555	0.35	-0.1
2,910,697	-		DZA65_RS13555	0.35	+0.7
2,910,697	-		DZA65_RS13555	0.35	+1.4
2,910,738	+		DZA65_RS13555	0.37	-0.5
2,910,738	+		DZA65_RS13555	0.37	-0.6
2,910,790	-		DZA65_RS13555	0.39	-1.1
2,910,828	+		DZA65_RS13555	0.41	-0.2
2,910,828	+		DZA65_RS13555	0.41	-0.6
2,910,907	+		DZA65_RS13555	0.44	+0.4
2,911,182	-		DZA65_RS13555	0.56	-0.3
2,911,269	+		DZA65_RS13555	0.59	-0.6
2,911,269	+		DZA65_RS13555	0.59	-0.3
2,911,270	-		DZA65_RS13555	0.59	-0.4
2,911,270	-		DZA65_RS13555	0.59	+0.1
2,911,287	+		DZA65_RS13555	0.60	+0.9
2,911,287	+		DZA65_RS13555	0.60	+0.3
2,911,287	+		DZA65_RS13555	0.60	+0.4
2,911,287	+		DZA65_RS13555	0.60	-1.9
2,911,287	+		DZA65_RS13555	0.60	+0.2
2,911,287	+		DZA65_RS13555	0.60	-0.1
2,911,287	+		DZA65_RS13555	0.60	-1.5
2,911,287	+		DZA65_RS13555	0.60	+0.2
2,911,287	+		DZA65_RS13555	0.60	-2.3
2,911,288	-		DZA65_RS13555	0.60	-0.5
2,911,288	-		DZA65_RS13555	0.60	-0.3
2,911,288	-		DZA65_RS13555	0.60	+0.3
2,911,288	-		DZA65_RS13555	0.60	-0.6
2,911,288	-		DZA65_RS13555	0.60	+1.8
2,911,309	+				-0.3
2,911,309	+		DZA65_RS13555	0.61	-0.5
2,911,309	+		DZA65_RS13555	0.61	-0.2
2,911,309	+				-1.3
2,911,310	-		DZA65_RS13555	0.61	+0.1
2,911,311	+		DZA65_RS13555	0.61	-1.4
2,911,312	-		DZA65_RS13555	0.61	-0.9
2,911,410	+		DZA65_RS13555	0.65	+0.9
2,911,410	+		DZA65_RS13555	0.65	-1.5
2,911,410	+		DZA65_RS13555	0.65	-0.8
2,911,410	+		DZA65_RS13555	0.65	-2.1
2,911,410	+		DZA65_RS13555	0.65	+0.7
2,911,410	+		DZA65_RS13555	0.65	+0.1
2,911,411	-		DZA65_RS13555	0.65	+0.5
2,911,411	-		DZA65_RS13555	0.65	-1.6
2,911,411	-		DZA65_RS13555	0.65	+1.0
2,911,524	+		DZA65_RS13555	0.70	+1.0
2,911,524	+		DZA65_RS13555	0.70	-0.2
2,911,525	-		DZA65_RS13555	0.70	+0.2
2,911,528	-		DZA65_RS13555	0.70	-0.1
2,911,575	+		DZA65_RS13555	0.72	-0.6
2,911,575	+		DZA65_RS13555	0.72	+0.7
2,911,575	+		DZA65_RS13555	0.72	-1.2
2,911,575	+		DZA65_RS13555	0.72	-1.5
2,911,575	+		DZA65_RS13555	0.72	-0.8
2,911,575	+		DZA65_RS13555	0.72	+0.0
2,911,576	-		DZA65_RS13555	0.72	+0.7
2,911,576	-		DZA65_RS13555	0.72	-0.3
2,911,576	-		DZA65_RS13555	0.72	-1.1
2,911,576	-		DZA65_RS13555	0.72	-0.6
2,911,576	-		DZA65_RS13555	0.72	-0.1
2,911,576	-		DZA65_RS13555	0.72	+0.5
2,911,576	-		DZA65_RS13555	0.72	-1.0
2,911,576	-		DZA65_RS13555	0.72	+0.2
2,911,576	-		DZA65_RS13555	0.72	+0.0
2,911,576	-		DZA65_RS13555	0.72	+0.3
2,911,579	+		DZA65_RS13555	0.72	+3.9
2,911,579	+		DZA65_RS13555	0.72	+0.5
2,911,579	+		DZA65_RS13555	0.72	-0.3
2,911,580	-		DZA65_RS13555	0.72	-0.9
2,911,580	-		DZA65_RS13555	0.72	+0.2
2,911,580	-		DZA65_RS13555	0.72	+0.2
2,911,580	-		DZA65_RS13555	0.72	-0.6
2,911,626	+		DZA65_RS13555	0.74	+0.0
2,911,638	+		DZA65_RS13555	0.75	+0.7
2,911,639	-		DZA65_RS13555	0.75	-1.3
2,911,639	-		DZA65_RS13555	0.75	-2.0
2,911,683	+		DZA65_RS13555	0.77	-0.2
2,911,683	+				-1.6
2,911,696	+		DZA65_RS13555	0.77	+1.1
2,911,709	-		DZA65_RS13555	0.78	+0.5
2,911,709	-		DZA65_RS13555	0.78	-0.6
2,911,710	+		DZA65_RS13555	0.78	-1.8
2,911,710	+		DZA65_RS13555	0.78	+1.7
2,911,710	+		DZA65_RS13555	0.78	-0.2
2,911,710	+		DZA65_RS13555	0.78	-0.9
2,911,711	-		DZA65_RS13555	0.78	+0.1
2,911,711	-		DZA65_RS13555	0.78	-0.3
2,911,711	-		DZA65_RS13555	0.78	+0.3
2,911,760	+		DZA65_RS13555	0.80	-0.3
2,911,761	-		DZA65_RS13555	0.80	+0.1
2,911,819	-		DZA65_RS13555	0.82	-0.2
2,911,819	-		DZA65_RS13555	0.82	-1.1
2,911,843	+		DZA65_RS13555	0.83	-1.2
2,911,843	+		DZA65_RS13555	0.83	+1.0
2,911,843	+		DZA65_RS13555	0.83	+0.4
2,911,844	-		DZA65_RS13555	0.83	+0.4
2,911,844	-		DZA65_RS13555	0.83	-0.5
2,911,844	-		DZA65_RS13555	0.83	+1.7
2,911,844	-		DZA65_RS13555	0.83	+0.8
2,911,855	-		DZA65_RS13555	0.84	-0.3
2,911,855	-		DZA65_RS13555	0.84	-0.0
2,911,855	-		DZA65_RS13555	0.84	-1.7
2,911,911	+		DZA65_RS13555	0.86	+1.6
2,911,911	+		DZA65_RS13555	0.86	+0.3
2,911,911	+		DZA65_RS13555	0.86	-1.6
2,911,911	+		DZA65_RS13555	0.86	-0.3
2,911,911	+		DZA65_RS13555	0.86	-1.5
2,911,912	-		DZA65_RS13555	0.86	+0.3
2,911,999	+				-1.4
2,911,999	+				+1.0
2,912,000	-				+2.3
2,912,000	-				-1.1
2,912,000	-				+1.7
2,912,000	-				-0.1
2,912,148	+				+0.3
2,912,149	-				+0.7
2,912,149	-				+0.2
2,912,214	-				-0.4
2,912,236	+				-0.1
2,912,236	+				-1.4
2,912,237	-				-0.1
2,912,250	+				+0.0
2,912,322	+				+0.1
2,912,322	+				-1.1
2,912,323	-				+0.1
2,912,551	+		DZA65_RS13560	0.22	+0.1
2,912,552	-		DZA65_RS13560	0.22	+1.4
2,912,659	+		DZA65_RS13560	0.30	+0.9
2,912,770	+		DZA65_RS13560	0.39	+0.7
2,912,770	+		DZA65_RS13560	0.39	-0.7
2,912,771	-		DZA65_RS13560	0.39	+1.5
2,912,968	+		DZA65_RS13560	0.54	+0.7
2,912,968	+		DZA65_RS13560	0.54	-0.8
2,912,969	-		DZA65_RS13560	0.54	+0.7
2,912,969	-		DZA65_RS13560	0.54	-2.6
2,912,969	-		DZA65_RS13560	0.54	-0.3
2,912,969	-		DZA65_RS13560	0.54	+0.4
2,912,971	+		DZA65_RS13560	0.54	+0.1
2,912,971	+		DZA65_RS13560	0.54	-0.1
2,912,971	+		DZA65_RS13560	0.54	-0.7
2,913,065	+		DZA65_RS13560	0.62	+0.1
2,913,066	-		DZA65_RS13560	0.62	+0.9
2,913,066	-		DZA65_RS13560	0.62	-0.3