Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS11685

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
2,493,764	+				+1.0
2,493,769	+				-0.2
2,493,814	-				-1.3
2,493,827	+				+0.8
2,493,893	+				-0.3
2,493,893	+				-2.8
2,493,894	-				+0.8
2,493,895	+				-0.8
2,493,895	+				+0.4
2,493,896	-				+0.3
2,493,898	+				-1.4
2,493,899	-				-0.1
2,493,899	-				+0.1
2,493,899	-				+0.4
2,493,926	+				-1.6
2,493,927	-				-1.2
2,493,931	+				+1.3
2,493,992	+				-1.4
2,494,000	+				+0.1
2,494,000	+				-0.8
2,494,001	-				-0.7
2,494,001	-				-0.8
2,494,023	+				-0.5
2,494,053	+				+0.6
2,494,053	+				-2.7
2,494,054	-				-0.2
2,494,054	-				-2.6
2,494,054	-				+0.4
2,494,054	-				+1.7
2,494,120	+				-0.2
2,494,123	+				+0.4
2,494,123	+				-0.4
2,494,123	+				+0.4
2,494,123	+				-0.5
2,494,123	+				-2.6
2,494,123	+				+1.0
2,494,123	+				-0.0
2,494,124	-				+0.4
2,494,124	-				-0.4
2,494,124	-				-0.7
2,494,124	-				+0.7
2,494,124	-				+1.7
2,494,124	-				+0.2
2,494,148	+				-0.7
2,494,149	-				-1.1
2,494,149	-				-1.3
2,494,149	-				+0.7
2,494,149	-				-0.8
2,494,190	+				+0.6
2,494,191	-		DZA65_RS11680	0.11	+0.6
2,494,214	+		DZA65_RS11680	0.15	+0.1
2,494,215	-		DZA65_RS11680	0.15	+0.3
2,494,215	-		DZA65_RS11680	0.15	+0.3
2,494,282	+		DZA65_RS11680	0.27	-1.0
2,494,305	+		DZA65_RS11680	0.31	-0.4
2,494,305	+		DZA65_RS11680	0.31	-1.3
2,494,306	-		DZA65_RS11680	0.31	+0.7
2,494,306	-		DZA65_RS11680	0.31	-0.0
2,494,306	-		DZA65_RS11680	0.31	+2.5
2,494,319	+		DZA65_RS11680	0.33	-0.5
2,494,319	+		DZA65_RS11680	0.33	+0.1
2,494,366	+		DZA65_RS11680	0.42	+1.3
2,494,382	-		DZA65_RS11680	0.44	+0.6
2,494,426	+		DZA65_RS11680	0.52	+0.2
2,494,523	+		DZA65_RS11680	0.69	-0.2
2,494,565	+		DZA65_RS11680	0.76	-2.6
2,494,565	+		DZA65_RS11680	0.76	-0.4
2,494,565	+		DZA65_RS11680	0.76	+0.2
2,494,565	+		DZA65_RS11680	0.76	-0.2
2,494,566	-		DZA65_RS11680	0.76	-0.4
2,494,566	-		DZA65_RS11680	0.76	+0.3
2,494,566	-		DZA65_RS11680	0.76	-0.4
2,494,566	-		DZA65_RS11680	0.76	+1.4
2,494,566	-		DZA65_RS11680	0.76	+0.2
2,494,596	+		DZA65_RS11680	0.82	-0.1
2,494,596	+		DZA65_RS11680	0.82	-0.4
2,494,596	+		DZA65_RS11680	0.82	+0.2
2,494,597	-		DZA65_RS11680	0.82	+0.7
2,494,597	-		DZA65_RS11680	0.82	+0.6
2,494,597	-		DZA65_RS11680	0.82	-0.0
2,494,655	+				-0.3
2,494,854	+		DZA65_RS11685	0.14	-0.7
2,494,854	+		DZA65_RS11685	0.14	+0.3
2,494,973	-		DZA65_RS11685	0.29	-0.0
2,494,973	-		DZA65_RS11685	0.29	+0.5
2,494,986	-		DZA65_RS11685	0.31	+0.2
2,495,162	-		DZA65_RS11685	0.52	+0.2
2,495,257	+		DZA65_RS11685	0.64	-0.1
2,495,257	+		DZA65_RS11685	0.64	+0.8
2,495,257	+		DZA65_RS11685	0.64	+0.1
2,495,257	+		DZA65_RS11685	0.64	+0.0
2,495,257	+		DZA65_RS11685	0.64	+0.1
2,495,258	-		DZA65_RS11685	0.64	+0.1
2,495,258	-		DZA65_RS11685	0.64	+0.3
2,495,258	-		DZA65_RS11685	0.64	+0.5
2,495,261	-		DZA65_RS11685	0.64	+0.2
2,495,308	-		DZA65_RS11685	0.70	-0.2
2,495,308	-		DZA65_RS11685	0.70	+0.1
2,495,353	+		DZA65_RS11685	0.76	-1.4
2,495,353	+		DZA65_RS11685	0.76	-1.0
2,495,353	+		DZA65_RS11685	0.76	+0.2
2,495,353	+		DZA65_RS11685	0.76	+1.3
2,495,354	-		DZA65_RS11685	0.76	-1.4
2,495,363	+		DZA65_RS11685	0.77	-0.2
2,495,426	+		DZA65_RS11685	0.85	-0.3
2,495,427	-		DZA65_RS11685	0.85	-0.0
2,495,427	-		DZA65_RS11685	0.85	+1.5
2,495,427	-		DZA65_RS11685	0.85	+0.6
2,495,427	-		DZA65_RS11685	0.85	+1.0
2,495,427	-		DZA65_RS11685	0.85	+0.1
2,495,427	-		DZA65_RS11685	0.85	-0.8
2,495,453	-		DZA65_RS11685	0.88	-1.8
2,495,529	+				+0.1
2,495,529	+				-1.3
2,495,529	+				-1.3
2,495,530	-				+0.3
2,495,530	-				-1.2
2,495,530	-				-0.1
2,495,530	-				-0.0
2,495,530	-				-0.7
2,495,542	+				-1.6
2,495,543	-				-0.7
2,495,627	+				+1.1
2,495,627	+				+0.8
2,495,628	-				+0.1
2,495,647	-				-0.9
2,495,724	-		DZA65_RS11690	0.38	-0.2
2,495,762	+		DZA65_RS11690	0.56	-0.2
2,495,762	+		DZA65_RS11690	0.56	-1.4
2,495,763	-		DZA65_RS11690	0.56	+1.8
2,495,812	+		DZA65_RS11690	0.80	-1.0
2,495,812	+		DZA65_RS11690	0.80	-0.2
2,495,813	-		DZA65_RS11690	0.80	+0.3
2,495,813	-		DZA65_RS11690	0.80	-0.1
2,495,831	-		DZA65_RS11690	0.89	-2.0
2,495,831	-		DZA65_RS11690	0.89	-0.5
2,495,898	-				+0.1
2,495,933	-		DZA65_RS11695	0.33	-0.0
2,495,978	-		DZA65_RS11695	0.72	-1.2
2,496,010	+				+0.3
2,496,013	-				-0.4
2,496,013	-				-1.8
2,496,013	-				-0.8
2,496,032	+				+0.6
2,496,046	-				-0.7
2,496,048	+				-1.3
2,496,048	+				+0.5
2,496,048	+				-0.6
2,496,049	-				+0.2
2,496,049	-				+0.4
2,496,049	-				+1.3
2,496,049	-				+0.0
2,496,049	-				+2.1
2,496,049	-				+1.1
2,496,052	+				-0.1
2,496,052	+				-0.8
2,496,053	-				-1.0
2,496,117	+				+0.1
2,496,118	-				-1.9
2,496,128	+				+0.1
2,496,140	+				+0.8
2,496,145	+				+1.3
2,496,146	-				+0.8
2,496,166	+				-3.3
2,496,201	+				+1.1
2,496,206	-				-0.5
2,496,272	+				-0.0
2,496,273	-				-1.4
2,496,275	+				+0.9
2,496,275	+				-2.3
2,496,275	+				+0.8
2,496,276	-				+1.1
2,496,281	-				+0.0
2,496,312	+				+0.3
2,496,333	+				-0.4
2,496,334	-				-0.4
2,496,479	+				-0.0
2,496,481	+				-0.7
2,496,485	-				-0.0
2,496,485	-				-1.4
2,496,488	+				+0.7
2,496,488	+				+1.2
2,496,488	+				-0.2
2,496,489	-				-0.4
2,496,490	+				+0.6
2,496,490	+				+0.6
2,496,490	+				-1.3
2,496,493	-				-1.4
2,496,500	-				-0.4