Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS10735

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
2,271,732	-		DZA65_RS10730	0.74	-1.0
2,271,749	+		DZA65_RS10730	0.74	-0.6
2,271,750	-		DZA65_RS10730	0.75	-0.5
2,271,750	-		DZA65_RS10730	0.75	-0.5
2,271,845	+		DZA65_RS10730	0.79	-0.7
2,271,845	+		DZA65_RS10730	0.79	+1.3
2,271,846	-		DZA65_RS10730	0.79	+0.6
2,271,897	+		DZA65_RS10730	0.82	-0.6
2,271,898	-		DZA65_RS10730	0.82	-1.7
2,271,898	-		DZA65_RS10730	0.82	-2.0
2,271,923	+		DZA65_RS10730	0.83	+0.2
2,271,923	+		DZA65_RS10730	0.83	-0.8
2,272,002	+		DZA65_RS10730	0.88	-0.9
2,272,002	+		DZA65_RS10730	0.88	+0.6
2,272,007	+		DZA65_RS10730	0.88	+2.6
2,272,007	+		DZA65_RS10730	0.88	-2.7
2,272,007	+		DZA65_RS10730	0.88	-1.6
2,272,007	+		DZA65_RS10730	0.88	-0.8
2,272,007	+		DZA65_RS10730	0.88	-0.7
2,272,007	+		DZA65_RS10730	0.88	+0.7
2,272,008	-		DZA65_RS10730	0.88	+0.6
2,272,008	-		DZA65_RS10730	0.88	-0.5
2,272,008	-		DZA65_RS10730	0.88	+0.5
2,272,008	-		DZA65_RS10730	0.88	+0.2
2,272,008	-		DZA65_RS10730	0.88	+0.3
2,272,008	-				+0.3
2,272,008	-		DZA65_RS10730	0.88	-0.7
2,272,008	-		DZA65_RS10730	0.88	-2.2
2,272,008	-		DZA65_RS10730	0.88	+0.0
2,272,092	+				-0.3
2,272,092	+				+0.5
2,272,092	+				+0.6
2,272,092	+				-0.2
2,272,092	+				+1.1
2,272,093	-				-0.6
2,272,093	-				-1.4
2,272,139	+				+0.6
2,272,139	+				-0.3
2,272,140	-				+0.6
2,272,140	-				-0.1
2,272,140	-				-2.6
2,272,140	-				-0.6
2,272,140	-				+0.1
2,272,168	-				-1.2
2,272,168	-				-0.2
2,272,234	+				+1.3
2,272,234	+				+0.8
2,272,234	+				-1.3
2,272,234	+				-0.1
2,272,235	-				+0.7
2,272,242	+				-0.6
2,272,243	-				+2.9
2,272,243	-				-0.0
2,272,276	+				-1.1
2,272,276	+				-3.1
2,272,276	+				-0.0
2,272,276	+				-2.0
2,272,277	-				-0.4
2,272,277	-				-0.2
2,272,277	-				+0.2
2,272,277	-				-0.8
2,272,289	+				-2.0
2,272,291	+				-1.4
2,272,291	+				-1.2
2,272,291	+				-0.1
2,272,291	+				-1.2
2,272,295	+				+0.0
2,272,295	+				-0.7
2,272,295	+				-1.1
2,272,295	+				+0.0
2,272,295	+				-0.7
2,272,295	+				-1.5
2,272,295	+				+0.9
2,272,295	+				-1.2
2,272,295	+				+0.0
2,272,295	+				-1.2
2,272,295	+				+1.9
2,272,295	+				+0.6
2,272,295	+				-1.0
2,272,296	-				-0.4
2,272,296	-				-2.0
2,272,296	-				-2.4
2,272,296	-				+0.6
2,272,296	-				-0.6
2,272,296	-				-1.2
2,272,296	-				-0.8
2,272,296	-				+1.4
2,272,296	-				+0.2
2,272,296	-				+0.4
2,272,296	-				+0.3
2,272,296	-				+0.5
2,272,296	-				-1.0
2,272,297	+				+0.0
2,272,297	+				-2.4
2,272,297	+				+0.6
2,272,298	-				+0.0
2,272,298	-				-0.2
2,272,298	-				+0.6
2,272,298	-				-0.4
2,272,306	+				+0.3
2,272,306	+				-0.3
2,272,306	+				-0.6
2,272,306	+				+0.1
2,272,307	-				-2.4
2,272,338	+				+0.4
2,272,339	-				-0.2
2,272,346	+				-0.1
2,272,347	-				-0.4
2,272,347	-				+0.8
2,272,359	-				+0.3
2,272,359	-				+0.2
2,272,442	-				-1.4
2,272,537	-				-0.1
2,272,589	+				-0.6
2,272,589	+				+0.1
2,272,589	+				+0.1
2,272,589	+				+1.6
2,272,589	+				+0.4
2,272,590	-				+0.8
2,272,594	+				+0.1
2,272,594	+				+0.0
2,272,594	+				+0.9
2,272,594	+				-0.2
2,272,594	+				+0.3
2,272,594	+				+0.0
2,272,594	+				-1.0
2,272,594	+				-1.7
2,272,594	+				-0.1
2,272,594	+				-0.4
2,272,595	-				+1.1
2,272,595	-				+1.0
2,272,595	-				+0.3
2,272,595	-				+0.3
2,272,595	-				+0.7
2,272,595	-				+1.7
2,272,610	+				+1.6
2,272,610	+				+0.0
2,272,610	+				+0.2
2,272,611	-				+2.4
2,272,611	-				-1.2
2,272,620	+				-0.3
2,272,620	+				-0.2
2,272,620	+				+0.1
2,272,620	+				+0.2
2,272,621	-				-0.6
2,272,621	-				-0.5
2,272,621	-				+0.2
2,272,621	-				-0.1
2,272,621	-				+0.3
2,272,621	-				+0.6
2,272,621	-				+0.6
2,272,624	+				+0.0
2,272,624	+				+0.1
2,272,624	+				-3.1
2,272,625	-				+0.0
2,272,625	-				-0.1
2,272,625	-				+1.3
2,272,663	+				+0.1
2,272,663	+				-0.7
2,272,664	-				-0.3
2,272,664	-				-0.4
2,272,667	+				+0.3
2,272,705	+				-0.7
2,272,709	-				+0.5
2,272,801	+		DZA65_RS10735	0.15	+0.8
2,272,801	+		DZA65_RS10735	0.15	-0.8
2,272,802	-		DZA65_RS10735	0.15	+0.2
2,272,802	-		DZA65_RS10735	0.15	+0.0
2,272,802	-		DZA65_RS10735	0.15	+0.0
2,272,803	+		DZA65_RS10735	0.15	-1.2
2,272,803	+		DZA65_RS10735	0.15	+1.1
2,272,867	-		DZA65_RS10735	0.24	+0.4
2,272,890	+		DZA65_RS10735	0.27	+1.2
2,272,893	+		DZA65_RS10735	0.27	+1.3
2,272,893	+		DZA65_RS10735	0.27	-1.0
2,272,894	-		DZA65_RS10735	0.27	+0.3
2,272,894	-		DZA65_RS10735	0.27	+0.3
2,272,894	-		DZA65_RS10735	0.27	+0.2
2,272,935	+		DZA65_RS10735	0.33	+0.6
2,272,935	+		DZA65_RS10735	0.33	+1.6
2,272,936	-		DZA65_RS10735	0.33	+0.2
2,272,938	+		DZA65_RS10735	0.33	+1.9
2,272,938	+		DZA65_RS10735	0.33	+0.6
2,272,938	+		DZA65_RS10735	0.33	+1.0
2,272,938	+		DZA65_RS10735	0.33	-1.0
2,272,939	-		DZA65_RS10735	0.33	-0.1
2,272,939	-		DZA65_RS10735	0.33	+0.4
2,272,939	-		DZA65_RS10735	0.33	-1.1
2,272,939	-		DZA65_RS10735	0.33	+0.3
2,272,939	-		DZA65_RS10735	0.33	+0.9
2,272,939	-		DZA65_RS10735	0.33	-1.0
2,273,037	+		DZA65_RS10735	0.46	-0.8
2,273,121	+		DZA65_RS10735	0.58	-0.1
2,273,121	+		DZA65_RS10735	0.58	-0.1
2,273,127	+		DZA65_RS10735	0.58	+1.4
2,273,167	+		DZA65_RS10735	0.64	-0.5
2,273,202	+		DZA65_RS10735	0.69	+2.0
2,273,202	+		DZA65_RS10735	0.69	-1.2
2,273,205	+		DZA65_RS10735	0.69	+0.2
2,273,205	+		DZA65_RS10735	0.69	-0.9
2,273,205	+		DZA65_RS10735	0.69	-1.0
2,273,205	+		DZA65_RS10735	0.69	-1.4
2,273,205	+		DZA65_RS10735	0.69	-0.2
2,273,205	+		DZA65_RS10735	0.69	-0.8
2,273,206	-		DZA65_RS10735	0.69	+0.8
2,273,206	-		DZA65_RS10735	0.69	-0.9
2,273,206	-		DZA65_RS10735	0.69	+0.2
2,273,206	-		DZA65_RS10735	0.69	-0.9
2,273,206	-		DZA65_RS10735	0.69	+1.9
2,273,206	-		DZA65_RS10735	0.69	+0.1
2,273,206	-		DZA65_RS10735	0.69	-0.4
2,273,206	-		DZA65_RS10735	0.69	-0.2
2,273,206	-		DZA65_RS10735	0.69	+0.5
2,273,208	+		DZA65_RS10735	0.69	+0.4
2,273,208	+		DZA65_RS10735	0.69	+0.3
2,273,209	-		DZA65_RS10735	0.69	+1.6
2,273,209	-		DZA65_RS10735	0.69	+0.6
2,273,209	-				+0.0
2,273,209	-		DZA65_RS10735	0.69	+0.6
2,273,253	+		DZA65_RS10735	0.75	+0.4
2,273,253	+		DZA65_RS10735	0.75	+0.4
2,273,280	+		DZA65_RS10735	0.79	-2.4
2,273,280	+		DZA65_RS10735	0.79	-1.4
2,273,280	+		DZA65_RS10735	0.79	+0.0
2,273,343	+		DZA65_RS10735	0.88	-0.1
2,273,343	+		DZA65_RS10735	0.88	+0.2
2,273,344	-		DZA65_RS10735	0.88	+0.9
2,273,344	-		DZA65_RS10735	0.88	+2.2
2,273,366	+				-0.4
2,273,366	+				+1.0
2,273,367	-				-0.1
2,273,378	+				+1.2
2,273,379	-				-2.0
2,273,379	-				-0.1
2,273,395	-				+1.1
2,273,397	-				+1.0
2,273,424	+				-0.4
2,273,424	+				+1.3
2,273,425	-				-0.2
2,273,425	-				+0.2
2,273,425	-				-0.4
2,273,433	+				-2.0
2,273,433	+				+1.1
2,273,433	+				+1.3
2,273,434	-				+1.3
2,273,434	-				+1.3
2,273,434	-				+2.9
2,273,434	-				-2.0
2,273,491	+				+0.4
2,273,492	-				-0.4
2,273,502	+				-1.0
2,273,502	+				+1.1
2,273,524	+				-0.2
2,273,533	+				-0.7
2,273,546	+				-0.1
2,273,546	+				-2.1
2,273,546	+				-0.7
2,273,546	+				+0.0
2,273,547	-				+0.6
2,273,547	-				+0.3
2,273,563	+				-0.8
2,273,563	+				+0.2
2,273,563	+				+0.4
2,273,566	+				-1.4
2,273,566	+				-1.9
2,273,566	+				-1.1
2,273,595	-				+2.0
2,273,697	-		DZA65_RS10740	0.17	+0.6
2,273,772	+		DZA65_RS10740	0.26	+0.3
2,273,772	+		DZA65_RS10740	0.26	-1.1
2,273,773	-		DZA65_RS10740	0.26	+1.0
2,273,773	-		DZA65_RS10740	0.26	-1.1
2,273,773	-		DZA65_RS10740	0.26	-0.1
2,273,798	+		DZA65_RS10740	0.29	-0.1
2,273,798	+		DZA65_RS10740	0.29	+0.1
2,273,798	+				+1.3
2,273,837	+		DZA65_RS10740	0.34	+0.1
2,273,837	+		DZA65_RS10740	0.34	-2.2
2,273,838	-		DZA65_RS10740	0.34	+0.3
2,273,862	+		DZA65_RS10740	0.37	-0.5
2,273,862	+		DZA65_RS10740	0.37	-0.4
2,273,863	-		DZA65_RS10740	0.37	-0.1
2,273,863	-		DZA65_RS10740	0.37	+0.9
2,273,863	-		DZA65_RS10740	0.37	+0.7
2,273,863	-		DZA65_RS10740	0.37	+0.7
2,273,864	+		DZA65_RS10740	0.37	-0.4
2,273,865	-		DZA65_RS10740	0.37	-0.8
2,273,874	+		DZA65_RS10740	0.38	+0.4
2,273,875	-		DZA65_RS10740	0.38	-0.3
2,274,048	+		DZA65_RS10740	0.58	+1.2
2,274,048	+		DZA65_RS10740	0.58	-0.2
2,274,049	-		DZA65_RS10740	0.59	-0.4
2,274,049	-		DZA65_RS10740	0.59	-0.4
2,274,049	-		DZA65_RS10740	0.59	+0.9
2,274,075	+		DZA65_RS10740	0.62	+0.2
2,274,076	-		DZA65_RS10740	0.62	+1.1
2,274,123	+		DZA65_RS10740	0.67	+0.0
2,274,123	+		DZA65_RS10740	0.67	-1.2
2,274,123	+		DZA65_RS10740	0.67	-1.7
2,274,151	+		DZA65_RS10740	0.71	-1.5
2,274,152	-		DZA65_RS10740	0.71	-0.4
2,274,152	-		DZA65_RS10740	0.71	-2.7
2,274,168	-		DZA65_RS10740	0.73	-1.6
2,274,278	+		DZA65_RS10740	0.85	+0.1
2,274,347	-				+0.4
2,274,360	+				-0.2
2,274,399	+				+1.9
2,274,400	-				-0.7
2,274,400	-				-1.4
2,274,400	-				-0.2
2,274,431	-				-0.4